BLASTX nr result
ID: Dioscorea21_contig00006535
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00006535
(1516 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002308911.1| predicted protein [Populus trichocarpa] gi|2... 720 0.0
ref|XP_003545704.1| PREDICTED: H/ACA ribonucleoprotein complex s... 716 0.0
ref|XP_002270073.1| PREDICTED: H/ACA ribonucleoprotein complex s... 716 0.0
ref|XP_004157453.1| PREDICTED: LOW QUALITY PROTEIN: H/ACA ribonu... 709 0.0
ref|XP_004137598.1| PREDICTED: H/ACA ribonucleoprotein complex s... 709 0.0
>ref|XP_002308911.1| predicted protein [Populus trichocarpa] gi|222854887|gb|EEE92434.1|
predicted protein [Populus trichocarpa]
Length = 593
Score = 720 bits (1859), Expect = 0.0
Identities = 367/469 (78%), Positives = 399/469 (85%), Gaps = 4/469 (0%)
Frame = +3
Query: 60 DSIPDLDQSQTDFFIKPQSFTPPADTSQWPILLKNYDRLNVRTGHYTPLPAGHSPLKRPI 239
D+ P D + DF IKPQ+FTP DTSQWPILLKNYDRLNVRTGHYTPLP+GHSPLKRP+
Sbjct: 24 DANPTTDTDK-DFMIKPQNFTPTIDTSQWPILLKNYDRLNVRTGHYTPLPSGHSPLKRPL 82
Query: 240 AEYLRYGIINLDKPSNPSSHEVVAWIKRLLRTEKTGHSGTLDPKVTGNLIVCVDRATRLV 419
AEY+RYGI+NLDKP+NPSSHEVVAWIKR+LR EKTGHSGTLDPKVTGNLIVC+DRATRLV
Sbjct: 83 AEYIRYGIMNLDKPANPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGNLIVCIDRATRLV 142
Query: 420 KSQQGAGKEYVCVARLHSAVPETSKVARALETLTGAVFQRPPLISAVKRQLRIRTIYESK 599
KSQQGAGKEYVC+ARLH VP+ +KVARALETLTGAVFQRPPLISAVKRQLRIRTIYESK
Sbjct: 143 KSQQGAGKEYVCIARLHDKVPDVAKVARALETLTGAVFQRPPLISAVKRQLRIRTIYESK 202
Query: 600 LLEYDADKHLVVFWISCEAGTYVRTXXXXXXXXXXXXXXMQELRRVRSGILGEKDNMVTM 779
LLEYDAD+HLVVFWISCEAGTYVRT MQELRRVRSGILGEKDNMVTM
Sbjct: 203 LLEYDADRHLVVFWISCEAGTYVRTMCVHLGLILGVGAHMQELRRVRSGILGEKDNMVTM 262
Query: 780 HDVMDAQWVYDNYKDESYLRRVVMPLEVLLTSYKRLVVKDSAVNAICYGAKLMIPGLLRF 959
HDVMDAQWVYDNY+DESYLRR +MPLEVLLTSYKRLVVKDSAVNAICYGAKLMIPGLLRF
Sbjct: 263 HDVMDAQWVYDNYRDESYLRRAIMPLEVLLTSYKRLVVKDSAVNAICYGAKLMIPGLLRF 322
Query: 960 ENDIENGEEVVLMTTKGEAIALGIAEMTTAVMATCDHGVVAKIKRVVMDRDTYPRKWGLG 1139
ENDIE GEEVVLMTTKGEA+ALGIAEMTTAVMATCDHGVVAKIKRVVMDRDTYPRKWGLG
Sbjct: 323 ENDIEAGEEVVLMTTKGEAVALGIAEMTTAVMATCDHGVVAKIKRVVMDRDTYPRKWGLG 382
Query: 1140 PRALMKKKMVAEGLLDKHGKPNEKTPGEWVRNLPL-PSXXXXXXXXXXXXQETVIAKEGV 1316
PRA +KKK+++EG LDKHGKPNE TP EW+RNL L P E V+ + G
Sbjct: 383 PRASIKKKLISEGKLDKHGKPNENTPHEWMRNLVLPPGGDSMVAGIAAAAAEPVVKEIGE 442
Query: 1317 VGEVKGSKDGKEDVEGKKRKLEQAMDS-AISVTAKKVKVDE--VDGAVD 1454
+ K +KDG ED EG+KRKL ++ DS A V AKK K +E V+G+ D
Sbjct: 443 EEKKKKNKDG-EDGEGRKRKLNESSDSPAAQVPAKKTKTEEEPVEGSDD 490
>ref|XP_003545704.1| PREDICTED: H/ACA ribonucleoprotein complex subunit 4-like [Glycine
max]
Length = 589
Score = 716 bits (1848), Expect = 0.0
Identities = 358/449 (79%), Positives = 392/449 (87%), Gaps = 2/449 (0%)
Frame = +3
Query: 102 IKPQSFTPPADTSQWPILLKNYDRLNVRTGHYTPLPAGHSPLKRPIAEYLRYGIINLDKP 281
IKPQSFTPP DTSQWPILLKNY+RLNVRTGHYTP+P+G+SPLKRP+AEYL+YG++NLDKP
Sbjct: 35 IKPQSFTPPIDTSQWPILLKNYERLNVRTGHYTPIPSGYSPLKRPLAEYLKYGVLNLDKP 94
Query: 282 SNPSSHEVVAWIKRLLRTEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGAGKEYVCVA 461
+NPSSHEVVAWIKRLLR EKTGHSGTLDPKVTGNLIVC+DRATRLVKSQQGAGKEYVC+A
Sbjct: 95 ANPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEYVCIA 154
Query: 462 RLHSAVPETSKVARALETLTGAVFQRPPLISAVKRQLRIRTIYESKLLEYDADKHLVVFW 641
RLHS VP+ SKVARALETLTGAVFQRPPLISAVKRQLRIRTIYESKLLEYD D+HLVVFW
Sbjct: 155 RLHSDVPDVSKVARALETLTGAVFQRPPLISAVKRQLRIRTIYESKLLEYDPDRHLVVFW 214
Query: 642 ISCEAGTYVRTXXXXXXXXXXXXXXMQELRRVRSGILGEKDNMVTMHDVMDAQWVYDNYK 821
ISCEAGTYVRT MQELRRVRSGI+GEKDNMV+MHDVMDAQWVYDNY+
Sbjct: 215 ISCEAGTYVRTMCVHLGLLLGVGSHMQELRRVRSGIMGEKDNMVSMHDVMDAQWVYDNYR 274
Query: 822 DESYLRRVVMPLEVLLTSYKRLVVKDSAVNAICYGAKLMIPGLLRFENDIENGEEVVLMT 1001
DE+YLRRVVMPLE+LLTSYKRLVVKDSAVNAICYGAK MIPGLLRFENDI+ GEEVVLMT
Sbjct: 275 DETYLRRVVMPLEILLTSYKRLVVKDSAVNAICYGAKFMIPGLLRFENDIDVGEEVVLMT 334
Query: 1002 TKGEAIALGIAEMTTAVMATCDHGVVAKIKRVVMDRDTYPRKWGLGPRALMKKKMVAEGL 1181
TKGEAIALGIAEMTTAVMATCDHGVVAKIKRVVMDRDTYPRKWGLGPRA MKK++++EG
Sbjct: 335 TKGEAIALGIAEMTTAVMATCDHGVVAKIKRVVMDRDTYPRKWGLGPRASMKKRLISEGK 394
Query: 1182 LDKHGKPNEKTPGEWVRNLPLPSXXXXXXXXXXXXQETVIAKEGVVGEVKGSKDGKE--D 1355
LDKHGKPNEKTP EW+RNL LP+ ++VIA E + K K+ D
Sbjct: 395 LDKHGKPNEKTPQEWLRNLVLPTGG-----------DSVIAGLAAAPEPEDDKIQKKEGD 443
Query: 1356 VEGKKRKLEQAMDSAISVTAKKVKVDEVD 1442
EGKKRK ++ DS ++V AKKVKVDEV+
Sbjct: 444 GEGKKRKKHESTDSPVAVPAKKVKVDEVE 472
>ref|XP_002270073.1| PREDICTED: H/ACA ribonucleoprotein complex subunit 4 [Vitis vinifera]
Length = 586
Score = 716 bits (1847), Expect = 0.0
Identities = 359/467 (76%), Positives = 399/467 (85%), Gaps = 6/467 (1%)
Frame = +3
Query: 72 DLDQSQTDFFIKPQSFTPPADTSQWPILLKNYDRLNVRTGHYTPLPAGHSPLKRPIAEYL 251
D Q +F IKPQSFTP DTSQWPILLKNYDRLNVRTGHYTPLP+G+SPLKRP+AEY+
Sbjct: 31 DPTQKDGEFLIKPQSFTPSLDTSQWPILLKNYDRLNVRTGHYTPLPSGYSPLKRPLAEYI 90
Query: 252 RYGIINLDKPSNPSSHEVVAWIKRLLRTEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQ 431
RYGI+NLDKP+NPSSHEVVAWIKR+LR EKTGHSGTLDPKVTGNLIVC+DRATRLVKSQQ
Sbjct: 91 RYGILNLDKPANPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQ 150
Query: 432 GAGKEYVCVARLHSAVPETSKVARALETLTGAVFQRPPLISAVKRQLRIRTIYESKLLEY 611
GAGKEYVCVARLHS+VP+ +KVARALETLTGAVFQRPPLISAVKRQLRIRTIYESKLLEY
Sbjct: 151 GAGKEYVCVARLHSSVPDVAKVARALETLTGAVFQRPPLISAVKRQLRIRTIYESKLLEY 210
Query: 612 DADKHLVVFWISCEAGTYVRTXXXXXXXXXXXXXXMQELRRVRSGILGEKDNMVTMHDVM 791
D D+HLVVFWISCEAGTYVRT MQELRRVRSGILGEKDNMVTMHDVM
Sbjct: 211 DPDRHLVVFWISCEAGTYVRTLCVHLGLILGVGGHMQELRRVRSGILGEKDNMVTMHDVM 270
Query: 792 DAQWVYDNYKDESYLRRVVMPLEVLLTSYKRLVVKDSAVNAICYGAKLMIPGLLRFENDI 971
DAQWVYDNY+DESYLRRV+MPLEV+LTSYKRLVVKDSAVNAICYGAKLMIPGLLRFEN+I
Sbjct: 271 DAQWVYDNYRDESYLRRVIMPLEVVLTSYKRLVVKDSAVNAICYGAKLMIPGLLRFENEI 330
Query: 972 ENGEEVVLMTTKGEAIALGIAEMTTAVMATCDHGVVAKIKRVVMDRDTYPRKWGLGPRAL 1151
ENGEEVVLMTTKGEAIALGIAEMTTAVMATCDHGVVA+IKRVVMDRDTYPRKWGLGPRA
Sbjct: 331 ENGEEVVLMTTKGEAIALGIAEMTTAVMATCDHGVVARIKRVVMDRDTYPRKWGLGPRAA 390
Query: 1152 MKKKMVAEGLLDKHGKPNEKTPGEWVRNLPLPSXXXXXXXXXXXXQETVIAKEGVVGE-- 1325
MKKK++ EG L+KHGKPNE TP EW+RN+ LP+ ++++A E
Sbjct: 391 MKKKLITEGKLNKHGKPNENTPSEWLRNVVLPTGG-----------DSMVASLAAAVEPT 439
Query: 1326 VKGSKDGKEDVEG--KKRKLEQAMDSAISVTAKKVK--VDEVDGAVD 1454
VK D KE+++G +KRKL ++ D ++V AKK+K ++EV V+
Sbjct: 440 VKAETDVKEEIDGEQRKRKLNESTDDPVTVPAKKIKKEIEEVSEFVE 486
>ref|XP_004157453.1| PREDICTED: LOW QUALITY PROTEIN: H/ACA ribonucleoprotein complex
subunit 4-like [Cucumis sativus]
Length = 566
Score = 709 bits (1831), Expect = 0.0
Identities = 354/450 (78%), Positives = 386/450 (85%)
Frame = +3
Query: 93 DFFIKPQSFTPPADTSQWPILLKNYDRLNVRTGHYTPLPAGHSPLKRPIAEYLRYGIINL 272
DF IKPQSFTPP DTSQWPILLKNYDRLNVRTGHYTPLP+G+ PLKRP+AEY+RYGI+NL
Sbjct: 23 DFMIKPQSFTPPVDTSQWPILLKNYDRLNVRTGHYTPLPSGYLPLKRPLAEYIRYGILNL 82
Query: 273 DKPSNPSSHEVVAWIKRLLRTEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGAGKEYV 452
DKP+NPSSHEVVAWIKR+LR +KTGHSGTLDPKVTGNLIVC+DRATRLVKSQQGAGKEYV
Sbjct: 83 DKPANPSSHEVVAWIKRILRVDKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEYV 142
Query: 453 CVARLHSAVPETSKVARALETLTGAVFQRPPLISAVKRQLRIRTIYESKLLEYDADKHLV 632
CVARLHSAVP+ SKVARALETLTGAVFQRPPLISAVKRQLRIRTIYESKLLEYDADKHLV
Sbjct: 143 CVARLHSAVPDVSKVARALETLTGAVFQRPPLISAVKRQLRIRTIYESKLLEYDADKHLV 202
Query: 633 VFWISCEAGTYVRTXXXXXXXXXXXXXXMQELRRVRSGILGEKDNMVTMHDVMDAQWVYD 812
VFWISCEAGTYVRT MQELRRVRSGILGEKDNMVTMHDVMDAQW YD
Sbjct: 203 VFWISCEAGTYVRTLCVHLGLILGVGGHMQELRRVRSGILGEKDNMVTMHDVMDAQWFYD 262
Query: 813 NYKDESYLRRVVMPLEVLLTSYKRLVVKDSAVNAICYGAKLMIPGLLRFENDIENGEEVV 992
N+KDESYLRRV+MPLEV+LTSYKRLVVKDSAVNAICYGAKLMIPGLLRFENDI GEEVV
Sbjct: 263 NFKDESYLRRVIMPLEVVLTSYKRLVVKDSAVNAICYGAKLMIPGLLRFENDIGAGEEVV 322
Query: 993 LMTTKGEAIALGIAEMTTAVMATCDHGVVAKIKRVVMDRDTYPRKWGLGPRALMKKKMVA 1172
LMTTKGEAIALGIAEMTTAVMATCDHGVVAKIKRVVMDRDTYPRKWGLGPRA MKKK++
Sbjct: 323 LMTTKGEAIALGIAEMTTAVMATCDHGVVAKIKRVVMDRDTYPRKWGLGPRASMKKKLIG 382
Query: 1173 EGLLDKHGKPNEKTPGEWVRNLPLPSXXXXXXXXXXXXQETVIAKEGVVGEVKGSKDGKE 1352
EG LDKHGKPNE TP EW+RNL LP+ + + + +++ +
Sbjct: 383 EGKLDKHGKPNENTPQEWMRNLVLPTGGDVLV-------ASAFVSDSATAKPTAAEESGK 435
Query: 1353 DVEGKKRKLEQAMDSAISVTAKKVKVDEVD 1442
D G+KRKL++ ++A AKK+K +EV+
Sbjct: 436 DDGGRKRKLDEETEAA---PAKKLKTEEVE 462
>ref|XP_004137598.1| PREDICTED: H/ACA ribonucleoprotein complex subunit 4-like, partial
[Cucumis sativus]
Length = 564
Score = 709 bits (1831), Expect = 0.0
Identities = 354/450 (78%), Positives = 386/450 (85%)
Frame = +3
Query: 93 DFFIKPQSFTPPADTSQWPILLKNYDRLNVRTGHYTPLPAGHSPLKRPIAEYLRYGIINL 272
DF IKPQSFTPP DTSQWPILLKNYDRLNVRTGHYTPLP+G+ PLKRP+AEY+RYGI+NL
Sbjct: 23 DFMIKPQSFTPPVDTSQWPILLKNYDRLNVRTGHYTPLPSGYLPLKRPLAEYIRYGILNL 82
Query: 273 DKPSNPSSHEVVAWIKRLLRTEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGAGKEYV 452
DKP+NPSSHEVVAWIKR+LR +KTGHSGTLDPKVTGNLIVC+DRATRLVKSQQGAGKEYV
Sbjct: 83 DKPANPSSHEVVAWIKRILRVDKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEYV 142
Query: 453 CVARLHSAVPETSKVARALETLTGAVFQRPPLISAVKRQLRIRTIYESKLLEYDADKHLV 632
CVARLHSAVP+ SKVARALETLTGAVFQRPPLISAVKRQLRIRTIYESKLLEYDADKHLV
Sbjct: 143 CVARLHSAVPDVSKVARALETLTGAVFQRPPLISAVKRQLRIRTIYESKLLEYDADKHLV 202
Query: 633 VFWISCEAGTYVRTXXXXXXXXXXXXXXMQELRRVRSGILGEKDNMVTMHDVMDAQWVYD 812
VFWISCEAGTYVRT MQELRRVRSGILGEKDNMVTMHDVMDAQW YD
Sbjct: 203 VFWISCEAGTYVRTLCVHLGLILGVGGHMQELRRVRSGILGEKDNMVTMHDVMDAQWFYD 262
Query: 813 NYKDESYLRRVVMPLEVLLTSYKRLVVKDSAVNAICYGAKLMIPGLLRFENDIENGEEVV 992
N+KDESYLRRV+MPLEV+LTSYKRLVVKDSAVNAICYGAKLMIPGLLRFENDI GEEVV
Sbjct: 263 NFKDESYLRRVIMPLEVVLTSYKRLVVKDSAVNAICYGAKLMIPGLLRFENDIGAGEEVV 322
Query: 993 LMTTKGEAIALGIAEMTTAVMATCDHGVVAKIKRVVMDRDTYPRKWGLGPRALMKKKMVA 1172
LMTTKGEAIALGIAEMTTAVMATCDHGVVAKIKRVVMDRDTYPRKWGLGPRA MKKK++
Sbjct: 323 LMTTKGEAIALGIAEMTTAVMATCDHGVVAKIKRVVMDRDTYPRKWGLGPRASMKKKLIG 382
Query: 1173 EGLLDKHGKPNEKTPGEWVRNLPLPSXXXXXXXXXXXXQETVIAKEGVVGEVKGSKDGKE 1352
EG LDKHGKPNE TP EW+RNL LP+ + + + +++ +
Sbjct: 383 EGKLDKHGKPNENTPQEWMRNLVLPTGGDVLV-------ASAFVSDSATAKPTAAEESGK 435
Query: 1353 DVEGKKRKLEQAMDSAISVTAKKVKVDEVD 1442
D G+KRKL++ ++A AKK+K +EV+
Sbjct: 436 DDGGRKRKLDEETEAA---PAKKLKTEEVE 462