BLASTX nr result

ID: Dioscorea21_contig00006504 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00006504
         (1063 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB64937.1| TdcA1-ORF1-ORF2 [Daucus carota]                       191   2e-46
dbj|BAB64529.1| TdcA1-ORF2 [Daucus carota]                            191   2e-46
gb|ABG37638.1| transposase [Populus trichocarpa]                      191   3e-46
emb|CAM57450.2| putative transposase [Antirrhinum majus]              183   7e-44
gb|EAZ30111.1| hypothetical protein OsJ_14172 [Oryza sativa Japo...   173   6e-41

>dbj|BAB64937.1| TdcA1-ORF1-ORF2 [Daucus carota]
          Length = 988

 Score =  191 bits (486), Expect = 2e-46
 Identities = 121/332 (36%), Positives = 168/332 (50%), Gaps = 3/332 (0%)
 Frame = +3

Query: 75   GRLPIFTHPGRFLGAKPFVRYLKDDEYYAAELYVLMNCIEVTPYIEQVLI*I*CLFFIC* 254
            G   IF+HPGR  G    VRYL D EY AA  YVL+NC EV PY E              
Sbjct: 268  GNFSIFSHPGRASGCAN-VRYLDDREYMAAHNYVLLNCPEVAPYTE-------------- 312

Query: 255  LS*Q**LYNVSIFDEIVKRDSPHITERELEKMRNARFAQWFKNYVQMHKDEIDHRLVEIS 434
                       IF  +V+ ++  IT+ E++K   + FA WFK Y Q      +  + +I+
Sbjct: 313  -----------IFINMVRENNQSITDAEIDKCLESDFALWFKQYAQNPSLVPNEIVRDIA 361

Query: 435  YGPARRVQCYKGYFVNGFKFHTKDYGETKKTMNSGVLVKGSCYNDYDRDFYGILIDVIEL 614
             GP R V+    ++VNG+KFHT+ YG  + T NSGV +KGS Y++   D++GI+ +++ L
Sbjct: 362  SGPLRSVRSVPIFYVNGYKFHTRKYGANRSTFNSGVCIKGSNYSETSNDYFGIIDEILIL 421

Query: 615  EYFGVG-NRVVLFKCHWFD--TEKGIRVHPMHGLIEIKYTSILHSNEPFVLAAQATQVYY 785
            EY  +   +  LFKC WFD     G RVH    ++E+     L   EPF+LA+QA QVY+
Sbjct: 422  EYPRLPIKKTTLFKCEWFDPTPSVGTRVHLRFKMVEVNRKKKLSVYEPFILASQAMQVYF 481

Query: 786  SKYPSTMKERQDWWAVFKTKARSTFNLSPIENDDENVNDLHRGVYQEDDISFPRLIAPSE 965
              YPS  +++ DW  V K KAR    LS         +  H+  YQ++    P  +   +
Sbjct: 482  CNYPSLRRDKMDWLVVCKIKARPLVELS-------QASQSHQEPYQDET---PENLNRID 531

Query: 966  ELDNPAVLVDNEFEEVNPSRLVEDDGDDGSEE 1061
              D P  L DNE        L  DDG+   EE
Sbjct: 532  IRDIPTHLNDNE------GILDLDDGEGSPEE 557


>dbj|BAB64529.1| TdcA1-ORF2 [Daucus carota]
          Length = 812

 Score =  191 bits (486), Expect = 2e-46
 Identities = 121/332 (36%), Positives = 168/332 (50%), Gaps = 3/332 (0%)
 Frame = +3

Query: 75   GRLPIFTHPGRFLGAKPFVRYLKDDEYYAAELYVLMNCIEVTPYIEQVLI*I*CLFFIC* 254
            G   IF+HPGR  G    VRYL D EY AA  YVL+NC EV PY E              
Sbjct: 492  GNFSIFSHPGRASGCAN-VRYLDDREYMAAHNYVLLNCPEVAPYTE-------------- 536

Query: 255  LS*Q**LYNVSIFDEIVKRDSPHITERELEKMRNARFAQWFKNYVQMHKDEIDHRLVEIS 434
                       IF  +V+ ++  IT+ E++K   + FA WFK Y Q      +  + +I+
Sbjct: 537  -----------IFINMVRENNQSITDAEIDKCLESDFALWFKQYAQNPSLVPNEIVRDIA 585

Query: 435  YGPARRVQCYKGYFVNGFKFHTKDYGETKKTMNSGVLVKGSCYNDYDRDFYGILIDVIEL 614
             GP R V+    ++VNG+KFHT+ YG  + T NSGV +KGS Y++   D++GI+ +++ L
Sbjct: 586  SGPLRSVRSVPIFYVNGYKFHTRKYGANRSTFNSGVCIKGSNYSETSNDYFGIIDEILIL 645

Query: 615  EYFGVG-NRVVLFKCHWFD--TEKGIRVHPMHGLIEIKYTSILHSNEPFVLAAQATQVYY 785
            EY  +   +  LFKC WFD     G RVH    ++E+     L   EPF+LA+QA QVY+
Sbjct: 646  EYPRLPIKKTTLFKCEWFDPTPSVGTRVHLRFKMVEVNRKKKLSVYEPFILASQAMQVYF 705

Query: 786  SKYPSTMKERQDWWAVFKTKARSTFNLSPIENDDENVNDLHRGVYQEDDISFPRLIAPSE 965
              YPS  +++ DW  V K KAR    LS         +  H+  YQ++    P  +   +
Sbjct: 706  CNYPSLRRDKMDWLVVCKIKARPLVELS-------QASQSHQEPYQDET---PENLNRID 755

Query: 966  ELDNPAVLVDNEFEEVNPSRLVEDDGDDGSEE 1061
              D P  L DNE        L  DDG+   EE
Sbjct: 756  IRDIPTHLNDNE------GILDLDDGEGSPEE 781


>gb|ABG37638.1| transposase [Populus trichocarpa]
          Length = 1450

 Score =  191 bits (485), Expect = 3e-46
 Identities = 115/326 (35%), Positives = 180/326 (55%), Gaps = 12/326 (3%)
 Frame = +3

Query: 75   GRLPIFTHPGRFLGAKPFV-RYLKDDEYYAAELYVLMNCIEVTPYIEQVLI*I*CLFFIC 251
            G L +F++ GR         RYL + E+  A  YVL NC E+ P+I++            
Sbjct: 727  GNLSLFSNLGRPTPKNAVRGRYLSEIEFKQAHNYVLFNCDELRPFIQE------------ 774

Query: 252  *LS*Q**LYNVSIFDEIVKRDSPHITERELEKMRNARFAQWFKNYVQMHKDEIDHRLVEI 431
                           + +  ++  +TE ++ ++++ +FA WF+ +V   +  +   L  +
Sbjct: 775  -------------HRQYLLSNNSQLTESQIFQLQDKQFATWFRTHVYQMRRSVAKSLSSL 821

Query: 432  SYGPARRVQCYKGYFVNGFKFHTKDYGETKKTMNSGVLVKGSCYNDYDRDFYGILIDVIE 611
            S  P R+V+CY  YF+NG  FHT++YG  +KT NSGV VKGS  ++ + D+YG L +V+E
Sbjct: 822  SLDPERKVKCYNEYFINGDVFHTEEYGHGRKTYNSGVCVKGSTSSELEVDYYGRLEEVVE 881

Query: 612  LEYFGVGNRVVLFKCHWFD-TEKGIRVHPMHGLIEIKYTSILHS-NEPFVLAAQATQVYY 785
            L+Y    NRV LFKC+W++ T++GIRV P +GL+EI   + L + N+ FV A Q  QVYY
Sbjct: 882  LQYHSEQNRVFLFKCYWYETTDRGIRVDPHYGLVEINSKARLSNVNDVFVFAKQCQQVYY 941

Query: 786  SKYPSTMKERQ--DWWAVFKTKARSTFNLSPIENDDENVNDLHRGVYQEDDISFPRLIAP 959
            +  PS  K+R   DW +V KTK R    L   +N+D ++ D    V+Q  ++  P  +AP
Sbjct: 942  TYTPSFRKDRSRVDWLSVLKTKPRGRVELVQDQNEDTSMRD---EVFQVSELVEPYRVAP 998

Query: 960  SEELDNPA-------VLVDNEFEEVN 1016
            S +L+  +        LVD + EE+N
Sbjct: 999  SIDLEENSNFRVFDDSLVDVDAEELN 1024


>emb|CAM57450.2| putative transposase [Antirrhinum majus]
          Length = 1108

 Score =  183 bits (464), Expect = 7e-44
 Identities = 114/313 (36%), Positives = 165/313 (52%), Gaps = 5/313 (1%)
 Frame = +3

Query: 81   LPIFTHPGRFLGAKPFVRYLKDDEYYAAELYVLMNCIEVTPYIEQVLI*I*CLFFIC*LS 260
            + IF   G+ LG +   ++L   E+ AAE Y+L+NC EV  ++                 
Sbjct: 789  ISIFQKRGKALG-RGRTKHLTLAEHQAAERYILLNCPEVDCWLR---------------- 831

Query: 261  *Q**LYNVSIFDEIVKRDSPHITERELEKMRNARFAQWFKNYVQMHKDEIDHRLVEISYG 440
                     +FDE +    P   E E+E  RN+ F +WFK  V   + ++D ++  ++YG
Sbjct: 832  ---------LFDEEMCMGVP---ENEIESRRNSYFVEWFKEAVYSGRYDVDPQIRGLAYG 879

Query: 441  PARRVQCYKGYFVNGFKFHTKDYGETKKTMNSGVLVKGSCYNDYDRDFYGILIDVIELEY 620
            P    + YKGY VNGF+FHT  YG  +KTMNSGV VK S  +  + +FYG+L +V+EL+Y
Sbjct: 880  PLLVARSYKGYTVNGFRFHTLSYGTGRKTMNSGVFVKASIGDPSETNFYGMLQEVLELDY 939

Query: 621  FGVGN--RVVLFKCHWFDTEKGIRVHPMHGLIEIKYTSILH--SNEPFVLAAQATQVYYS 788
            +G G+   V LFKC WFD   G+  HP +GL++I     L   ++EPF+LA+QA QVYY+
Sbjct: 940  WGSGHLQNVTLFKCDWFDIYHGMTTHPTYGLVDINPGKRLSTGTSEPFILASQAKQVYYT 999

Query: 789  KYPSTMK-ERQDWWAVFKTKARSTFNLSPIENDDENVNDLHRGVYQEDDISFPRLIAPSE 965
             YPS     R+ WWAV  T+AR   + + +             VYQ+   S  R +    
Sbjct: 1000 TYPSQQSARRRGWWAVCTTRARYVVDTTSV------FVSTTTNVYQDIGNSLNRRVDDIN 1053

Query: 966  ELDNPAVLVDNEF 1004
              DN   L  +EF
Sbjct: 1054 ANDNGMQLPSDEF 1066


>gb|EAZ30111.1| hypothetical protein OsJ_14172 [Oryza sativa Japonica Group]
          Length = 838

 Score =  173 bits (439), Expect = 6e-41
 Identities = 112/324 (34%), Positives = 174/324 (53%), Gaps = 7/324 (2%)
 Frame = +3

Query: 69   PMGRLPIFTHPGRFLGAKPFVRYLKDDEYYAAELYVLMNCIEVTPYIEQVLI*I*CLFFI 248
            P   L IF+ P R LG       L  +E+ AA +Y L+NC EV  Y+ +           
Sbjct: 499  PTDWLSIFSIPYRTLGKSTSCN-LSREEWQAARVYALLNCAEVDKYVLK----------- 546

Query: 249  C*LS*Q**LYNVSIFDEIVKRDSPHITERELEKMRNARFAQWFKNYVQMHKDE-IDHRLV 425
                          FD  +K+ + +IT  +L++M    F  W +      KDE ++ ++ 
Sbjct: 547  --------------FDRGMKQQNRNITTTQLQEMHEKDFPTWVRELAG--KDETVEEQVR 590

Query: 426  EISYGPARRVQCYKGYFVNGFKFHTKDYGETK--KTM-NSGVLVKGSCYNDYDRDFYGIL 596
             +S GP   V+CYKG  V GF+F T+ Y + K  +TM NSGV V  + +++   D+YG +
Sbjct: 591  ALSIGPRYMVKCYKGCDVQGFRFRTQPYEQKKSSRTMTNSGVCVSANWFDNQGPDYYGTI 650

Query: 597  IDVIELEYFGVGN-RVVLFKCHWFDTEKGIRVHPMHGLIEIKYTSILHSNEPFVLAAQAT 773
             ++IELEY    + +V LFKC WFD +KG++     GL+E+ +TS L   EPFVLA Q  
Sbjct: 651  QEIIELEYVSDSDLKVALFKCVWFDPKKGVKYDKALGLVEVNHTSRLEQYEPFVLAYQVD 710

Query: 774  QVYYSKYPSTMKERQDWWAVFKTKARSTFNLSPIEND-DENVNDLHRGVYQEDDISFPRL 950
            QVYY+ YPS  +ER+DWW  FKT    T  +  ++++ D+++  +    YQE +     +
Sbjct: 711  QVYYTPYPSPPRERKDWWVAFKTNPIGTLPVPAVDDEVDDSLPPVVSEYYQEGEQLGADI 770

Query: 951  IAPSEELDNPAVLVD-NEFEEVNP 1019
               S+EL + ++L + N  E+V+P
Sbjct: 771  ---SQELGDESLLHESNIVEQVDP 791


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