BLASTX nr result
ID: Dioscorea21_contig00005976
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00005976 (496 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002276495.1| PREDICTED: uncharacterized protein LOC100265... 69 5e-10 ref|NP_193739.1| integrator complex subunit 7 [Arabidopsis thali... 57 1e-06 >ref|XP_002276495.1| PREDICTED: uncharacterized protein LOC100265170 [Vitis vinifera] gi|296082233|emb|CBI21238.3| unnamed protein product [Vitis vinifera] Length = 1166 Score = 68.6 bits (166), Expect = 5e-10 Identities = 44/167 (26%), Positives = 81/167 (48%), Gaps = 2/167 (1%) Frame = +2 Query: 2 VMPNISDLVDRFANISSRLNKLAKAYDTLATSFLDIDFSSVGNMLRFALNCXXXXXXXXX 181 ++ L + + +S +L +LA+ +D +ATSF+ +D S + AL+C Sbjct: 779 ILVEYPQLSQQISQVSFQLKRLAQEFDLMATSFIGMDSKSSKIISALALSCSILAFITGF 838 Query: 182 XXXXXXXPSFESIISYSSQKLENHPPTVLLQDLVDRLWGIDDNIVLVLQQFMVGSGE--L 355 P +++ + S + L +VL+QDL+ RLW +D ++ L + SG+ Sbjct: 839 TLYFPEIPVNKNVTTCSLEGLGRFSHSVLIQDLIGRLWHMDHEMIANLCLLLKASGQPKS 898 Query: 356 TCYPQSRTQINKSDHKNQGSLLISSFAVCNILKIHEDAKKVKDDEDL 496 C+ QS QI S + L + +AV ++ + +A K ++EDL Sbjct: 899 CCHLQSGNQIWSSGCGVKDVLTVCRYAVTRVVHLQNEANKGHNEEDL 945 >ref|NP_193739.1| integrator complex subunit 7 [Arabidopsis thaliana] gi|2827660|emb|CAA16614.1| hypothetical protein [Arabidopsis thaliana] gi|7268801|emb|CAB79006.1| hypothetical protein [Arabidopsis thaliana] gi|332658868|gb|AEE84268.1| integrator complex subunit 7 [Arabidopsis thaliana] Length = 1134 Score = 57.4 bits (137), Expect = 1e-06 Identities = 39/123 (31%), Positives = 62/123 (50%), Gaps = 1/123 (0%) Frame = +2 Query: 20 DLVDRFANISSRLNKLAKAYDTLATSFLDIDFSSVGNMLRFALNCXXXXXXXXXXXXXXX 199 D + + IS +L KLAK +D LAT F+DID SS + +L+C Sbjct: 764 DSLQQLPRISIQLQKLAKEFDMLATCFIDIDDSSSSIITTISLSCSVLAFAAGIVLFLPG 823 Query: 200 XPSFESIISYSSQKLENHPPTVLLQDLVDRLWGIDDNIVLVLQQFMVGSGELTCYP-QSR 376 E+++ ++SQ + + L++DLV RLW +D N+ L + + L C+ QSR Sbjct: 824 FSFQEALVPFTSQ---SGLCSRLVEDLVRRLWKVDPNVCEKLNILVNTNESLNCFHLQSR 880 Query: 377 TQI 385 Q+ Sbjct: 881 NQV 883