BLASTX nr result

ID: Dioscorea21_contig00005936 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00005936
         (288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28269.3| unnamed protein product [Vitis vinifera]               73   3e-11
ref|XP_002272473.1| PREDICTED: transcription factor E2FB-like [V...    73   3e-11
ref|XP_002312830.1| transcription factor E2F [Populus trichocarp...    70   2e-10
ref|XP_003537096.1| PREDICTED: transcription factor E2FA-like [G...    69   5e-10
gb|ACU17412.1| unknown [Glycine max]                                   68   9e-10

>emb|CBI28269.3| unnamed protein product [Vitis vinifera]
          Length = 446

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 33/68 (48%), Positives = 40/68 (58%)
 Frame = -3

Query: 286 PSEIHHDTDYWLLSEADVSMTDMWRTPSDASWNWMDGLNLDALNEGHSMASPQTPSSGVQ 107
           PS++  D DYWLLS+ADVS+TDMWRT     WN +D LN D      S   PQTP S   
Sbjct: 376 PSDVDSDADYWLLSDADVSITDMWRTEPGVEWNELDALNDDYAMANVSTPQPQTPPSSAA 435

Query: 106 VTPPKTDS 83
             PP  ++
Sbjct: 436 EVPPAANT 443


>ref|XP_002272473.1| PREDICTED: transcription factor E2FB-like [Vitis vinifera]
          Length = 457

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 33/68 (48%), Positives = 40/68 (58%)
 Frame = -3

Query: 286 PSEIHHDTDYWLLSEADVSMTDMWRTPSDASWNWMDGLNLDALNEGHSMASPQTPSSGVQ 107
           PS++  D DYWLLS+ADVS+TDMWRT     WN +D LN D      S   PQTP S   
Sbjct: 387 PSDVDSDADYWLLSDADVSITDMWRTEPGVEWNELDALNDDYAMANVSTPQPQTPPSSAA 446

Query: 106 VTPPKTDS 83
             PP  ++
Sbjct: 447 EVPPAANT 454


>ref|XP_002312830.1| transcription factor E2F [Populus trichocarpa]
           gi|222849238|gb|EEE86785.1| transcription factor E2F
           [Populus trichocarpa]
          Length = 473

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 31/63 (49%), Positives = 41/63 (65%)
 Frame = -3

Query: 286 PSEIHHDTDYWLLSEADVSMTDMWRTPSDASWNWMDGLNLDALNEGHSMASPQTPSSGVQ 107
           PS+++ D DYWLLS+ADVS+TDMWR      WN +D L+ D +    S   PQTPS+  +
Sbjct: 404 PSDVNSDADYWLLSDADVSITDMWRNEPVVEWNDLDTLHNDYVMPNFSTPQPQTPSNPTE 463

Query: 106 VTP 98
           V P
Sbjct: 464 VPP 466


>ref|XP_003537096.1| PREDICTED: transcription factor E2FA-like [Glycine max]
          Length = 504

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 32/63 (50%), Positives = 42/63 (66%)
 Frame = -3

Query: 286 PSEIHHDTDYWLLSEADVSMTDMWRTPSDASWNWMDGLNLDALNEGHSMASPQTPSSGVQ 107
           PS++ +D DYWLLS+AD+S+TDMWRT S   WN +D L+ D       ++ PQTPSSG  
Sbjct: 437 PSDVDNDADYWLLSDADISITDMWRTDSSVDWNGVDMLHPDF----GVISRPQTPSSGFA 492

Query: 106 VTP 98
             P
Sbjct: 493 EVP 495


>gb|ACU17412.1| unknown [Glycine max]
          Length = 73

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 32/63 (50%), Positives = 43/63 (68%)
 Frame = -3

Query: 286 PSEIHHDTDYWLLSEADVSMTDMWRTPSDASWNWMDGLNLDALNEGHSMASPQTPSSGVQ 107
           PS++ +D DYWLLS+ADVS+TDMWRT S   WN +D L+ D       ++ PQ+PSSG+ 
Sbjct: 6   PSDVDNDADYWLLSDADVSITDMWRTDSTVDWNGIDMLHPDF----GIISRPQSPSSGLA 61

Query: 106 VTP 98
             P
Sbjct: 62  EVP 64


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