BLASTX nr result

ID: Dioscorea21_contig00005929 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00005929
         (827 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313404.1| tubulin, beta chain [Populus trichocarpa] gi...   525   e-147
gb|AAL92026.1|AF484959_1 tubulin beta-1 [Gossypium hirsutum] gi|...   522   e-146
ref|XP_002304488.1| tubulin, beta chain [Populus trichocarpa] gi...   521   e-146
ref|XP_002298330.1| tubulin beta chain [Populus trichocarpa] gi|...   521   e-146
gb|ABK94073.1| unknown [Populus trichocarpa]                          521   e-146

>ref|XP_002313404.1| tubulin, beta chain [Populus trichocarpa]
           gi|222849812|gb|EEE87359.1| tubulin, beta chain [Populus
           trichocarpa]
          Length = 451

 Score =  525 bits (1352), Expect = e-147
 Identities = 256/275 (93%), Positives = 258/275 (93%)
 Frame = -3

Query: 825 IQGGQCGNQIGAKFWEVVCAEHGIDSTGRCSGSSPLHLERINVYYNEASCGRFVPRAVLM 646
           IQGGQCGNQIGAKFWEVVCAEHGIDSTGR  G SPL LERINVYYNEASCGRFVPRAVLM
Sbjct: 7   IQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGDSPLQLERINVYYNEASCGRFVPRAVLM 66

Query: 645 DLEPGTVDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAEN 466
           DLEPGT+DSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAEN
Sbjct: 67  DLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAEN 126

Query: 465 CDCLQGFQVCHXXXXXXXXXXXXXLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNAT 286
           CDCLQGFQVCH             LISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNAT
Sbjct: 127 CDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNAT 186

Query: 285 LSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQL 106
           LSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQL
Sbjct: 187 LSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQL 246

Query: 105 NSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQY 1
           NSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQY
Sbjct: 247 NSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQY 281


>gb|AAL92026.1|AF484959_1 tubulin beta-1 [Gossypium hirsutum]
           gi|19569609|gb|AAL92118.1|AF487511_1 beta-tubulin
           [Gossypium hirsutum]
          Length = 445

 Score =  522 bits (1344), Expect = e-146
 Identities = 255/275 (92%), Positives = 257/275 (93%)
 Frame = -3

Query: 825 IQGGQCGNQIGAKFWEVVCAEHGIDSTGRCSGSSPLHLERINVYYNEASCGRFVPRAVLM 646
           IQGGQCGNQIGAKFWEVVCAEHGIDSTGR  G S L LERINVYYNEASCGRFVPRAVLM
Sbjct: 7   IQGGQCGNQIGAKFWEVVCAEHGIDSTGRYGGDSELQLERINVYYNEASCGRFVPRAVLM 66

Query: 645 DLEPGTVDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAEN 466
           DLEPGT+DSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAEN
Sbjct: 67  DLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAEN 126

Query: 465 CDCLQGFQVCHXXXXXXXXXXXXXLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNAT 286
           CDCLQGFQVCH             LISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNAT
Sbjct: 127 CDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNAT 186

Query: 285 LSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQL 106
           LSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQL
Sbjct: 187 LSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQL 246

Query: 105 NSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQY 1
           NSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQY
Sbjct: 247 NSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQY 281


>ref|XP_002304488.1| tubulin, beta chain [Populus trichocarpa]
           gi|222841920|gb|EEE79467.1| tubulin, beta chain [Populus
           trichocarpa]
          Length = 446

 Score =  521 bits (1342), Expect = e-146
 Identities = 254/275 (92%), Positives = 257/275 (93%)
 Frame = -3

Query: 825 IQGGQCGNQIGAKFWEVVCAEHGIDSTGRCSGSSPLHLERINVYYNEASCGRFVPRAVLM 646
           IQGGQCGNQIGAKFWEVVCAEHGIDSTGR  G S L LER+NVYYNEASCGRFVPRAVLM
Sbjct: 7   IQGGQCGNQIGAKFWEVVCAEHGIDSTGRYHGDSALQLERVNVYYNEASCGRFVPRAVLM 66

Query: 645 DLEPGTVDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAEN 466
           DLEPGT+DSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAEN
Sbjct: 67  DLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAEN 126

Query: 465 CDCLQGFQVCHXXXXXXXXXXXXXLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNAT 286
           CDCLQGFQVCH             LISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNAT
Sbjct: 127 CDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNAT 186

Query: 285 LSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQL 106
           LSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQL
Sbjct: 187 LSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQL 246

Query: 105 NSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQY 1
           NSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQY
Sbjct: 247 NSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQY 281


>ref|XP_002298330.1| tubulin beta chain [Populus trichocarpa]
           gi|118485680|gb|ABK94690.1| unknown [Populus
           trichocarpa] gi|222845588|gb|EEE83135.1| tubulin beta
           chain [Populus trichocarpa]
          Length = 449

 Score =  521 bits (1342), Expect = e-146
 Identities = 254/275 (92%), Positives = 257/275 (93%)
 Frame = -3

Query: 825 IQGGQCGNQIGAKFWEVVCAEHGIDSTGRCSGSSPLHLERINVYYNEASCGRFVPRAVLM 646
           IQGGQCGNQIGAKFWEVVCAEHGIDSTG   G SPL LERINVYYNEASCGRFVPRAVLM
Sbjct: 7   IQGGQCGNQIGAKFWEVVCAEHGIDSTGSYHGDSPLQLERINVYYNEASCGRFVPRAVLM 66

Query: 645 DLEPGTVDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAEN 466
           DLEPGT+DS+RSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAEN
Sbjct: 67  DLEPGTMDSLRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAEN 126

Query: 465 CDCLQGFQVCHXXXXXXXXXXXXXLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNAT 286
           CDCLQGFQVCH             LISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNAT
Sbjct: 127 CDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNAT 186

Query: 285 LSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQL 106
           LSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQL
Sbjct: 187 LSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQL 246

Query: 105 NSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQY 1
           NSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQY
Sbjct: 247 NSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQY 281


>gb|ABK94073.1| unknown [Populus trichocarpa]
          Length = 446

 Score =  521 bits (1342), Expect = e-146
 Identities = 254/275 (92%), Positives = 257/275 (93%)
 Frame = -3

Query: 825 IQGGQCGNQIGAKFWEVVCAEHGIDSTGRCSGSSPLHLERINVYYNEASCGRFVPRAVLM 646
           IQGGQCGNQIGAKFWEVVCAEHGIDSTGR  G S L LER+NVYYNEASCGRFVPRAVLM
Sbjct: 7   IQGGQCGNQIGAKFWEVVCAEHGIDSTGRYHGDSALQLERVNVYYNEASCGRFVPRAVLM 66

Query: 645 DLEPGTVDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAEN 466
           DLEPGT+DSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAEN
Sbjct: 67  DLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAEN 126

Query: 465 CDCLQGFQVCHXXXXXXXXXXXXXLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNAT 286
           CDCLQGFQVCH             LISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNAT
Sbjct: 127 CDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNAT 186

Query: 285 LSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQL 106
           LSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQL
Sbjct: 187 LSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQL 246

Query: 105 NSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQY 1
           NSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQY
Sbjct: 247 NSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQY 281


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