BLASTX nr result
ID: Dioscorea21_contig00005929
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00005929 (827 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002313404.1| tubulin, beta chain [Populus trichocarpa] gi... 525 e-147 gb|AAL92026.1|AF484959_1 tubulin beta-1 [Gossypium hirsutum] gi|... 522 e-146 ref|XP_002304488.1| tubulin, beta chain [Populus trichocarpa] gi... 521 e-146 ref|XP_002298330.1| tubulin beta chain [Populus trichocarpa] gi|... 521 e-146 gb|ABK94073.1| unknown [Populus trichocarpa] 521 e-146 >ref|XP_002313404.1| tubulin, beta chain [Populus trichocarpa] gi|222849812|gb|EEE87359.1| tubulin, beta chain [Populus trichocarpa] Length = 451 Score = 525 bits (1352), Expect = e-147 Identities = 256/275 (93%), Positives = 258/275 (93%) Frame = -3 Query: 825 IQGGQCGNQIGAKFWEVVCAEHGIDSTGRCSGSSPLHLERINVYYNEASCGRFVPRAVLM 646 IQGGQCGNQIGAKFWEVVCAEHGIDSTGR G SPL LERINVYYNEASCGRFVPRAVLM Sbjct: 7 IQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGDSPLQLERINVYYNEASCGRFVPRAVLM 66 Query: 645 DLEPGTVDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAEN 466 DLEPGT+DSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAEN Sbjct: 67 DLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAEN 126 Query: 465 CDCLQGFQVCHXXXXXXXXXXXXXLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNAT 286 CDCLQGFQVCH LISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNAT Sbjct: 127 CDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNAT 186 Query: 285 LSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQL 106 LSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQL Sbjct: 187 LSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQL 246 Query: 105 NSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQY 1 NSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQY Sbjct: 247 NSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQY 281 >gb|AAL92026.1|AF484959_1 tubulin beta-1 [Gossypium hirsutum] gi|19569609|gb|AAL92118.1|AF487511_1 beta-tubulin [Gossypium hirsutum] Length = 445 Score = 522 bits (1344), Expect = e-146 Identities = 255/275 (92%), Positives = 257/275 (93%) Frame = -3 Query: 825 IQGGQCGNQIGAKFWEVVCAEHGIDSTGRCSGSSPLHLERINVYYNEASCGRFVPRAVLM 646 IQGGQCGNQIGAKFWEVVCAEHGIDSTGR G S L LERINVYYNEASCGRFVPRAVLM Sbjct: 7 IQGGQCGNQIGAKFWEVVCAEHGIDSTGRYGGDSELQLERINVYYNEASCGRFVPRAVLM 66 Query: 645 DLEPGTVDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAEN 466 DLEPGT+DSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAEN Sbjct: 67 DLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAEN 126 Query: 465 CDCLQGFQVCHXXXXXXXXXXXXXLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNAT 286 CDCLQGFQVCH LISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNAT Sbjct: 127 CDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNAT 186 Query: 285 LSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQL 106 LSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQL Sbjct: 187 LSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQL 246 Query: 105 NSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQY 1 NSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQY Sbjct: 247 NSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQY 281 >ref|XP_002304488.1| tubulin, beta chain [Populus trichocarpa] gi|222841920|gb|EEE79467.1| tubulin, beta chain [Populus trichocarpa] Length = 446 Score = 521 bits (1342), Expect = e-146 Identities = 254/275 (92%), Positives = 257/275 (93%) Frame = -3 Query: 825 IQGGQCGNQIGAKFWEVVCAEHGIDSTGRCSGSSPLHLERINVYYNEASCGRFVPRAVLM 646 IQGGQCGNQIGAKFWEVVCAEHGIDSTGR G S L LER+NVYYNEASCGRFVPRAVLM Sbjct: 7 IQGGQCGNQIGAKFWEVVCAEHGIDSTGRYHGDSALQLERVNVYYNEASCGRFVPRAVLM 66 Query: 645 DLEPGTVDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAEN 466 DLEPGT+DSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAEN Sbjct: 67 DLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAEN 126 Query: 465 CDCLQGFQVCHXXXXXXXXXXXXXLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNAT 286 CDCLQGFQVCH LISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNAT Sbjct: 127 CDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNAT 186 Query: 285 LSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQL 106 LSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQL Sbjct: 187 LSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQL 246 Query: 105 NSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQY 1 NSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQY Sbjct: 247 NSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQY 281 >ref|XP_002298330.1| tubulin beta chain [Populus trichocarpa] gi|118485680|gb|ABK94690.1| unknown [Populus trichocarpa] gi|222845588|gb|EEE83135.1| tubulin beta chain [Populus trichocarpa] Length = 449 Score = 521 bits (1342), Expect = e-146 Identities = 254/275 (92%), Positives = 257/275 (93%) Frame = -3 Query: 825 IQGGQCGNQIGAKFWEVVCAEHGIDSTGRCSGSSPLHLERINVYYNEASCGRFVPRAVLM 646 IQGGQCGNQIGAKFWEVVCAEHGIDSTG G SPL LERINVYYNEASCGRFVPRAVLM Sbjct: 7 IQGGQCGNQIGAKFWEVVCAEHGIDSTGSYHGDSPLQLERINVYYNEASCGRFVPRAVLM 66 Query: 645 DLEPGTVDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAEN 466 DLEPGT+DS+RSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAEN Sbjct: 67 DLEPGTMDSLRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAEN 126 Query: 465 CDCLQGFQVCHXXXXXXXXXXXXXLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNAT 286 CDCLQGFQVCH LISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNAT Sbjct: 127 CDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNAT 186 Query: 285 LSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQL 106 LSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQL Sbjct: 187 LSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQL 246 Query: 105 NSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQY 1 NSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQY Sbjct: 247 NSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQY 281 >gb|ABK94073.1| unknown [Populus trichocarpa] Length = 446 Score = 521 bits (1342), Expect = e-146 Identities = 254/275 (92%), Positives = 257/275 (93%) Frame = -3 Query: 825 IQGGQCGNQIGAKFWEVVCAEHGIDSTGRCSGSSPLHLERINVYYNEASCGRFVPRAVLM 646 IQGGQCGNQIGAKFWEVVCAEHGIDSTGR G S L LER+NVYYNEASCGRFVPRAVLM Sbjct: 7 IQGGQCGNQIGAKFWEVVCAEHGIDSTGRYHGDSALQLERVNVYYNEASCGRFVPRAVLM 66 Query: 645 DLEPGTVDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAEN 466 DLEPGT+DSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAEN Sbjct: 67 DLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAEN 126 Query: 465 CDCLQGFQVCHXXXXXXXXXXXXXLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNAT 286 CDCLQGFQVCH LISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNAT Sbjct: 127 CDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNAT 186 Query: 285 LSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQL 106 LSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQL Sbjct: 187 LSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQL 246 Query: 105 NSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQY 1 NSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQY Sbjct: 247 NSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQY 281