BLASTX nr result

ID: Dioscorea21_contig00005924 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00005924
         (310 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003520939.1| PREDICTED: tubulin beta-2 chain-like [Glycin...   209   2e-52
ref|XP_003516925.1| PREDICTED: tubulin beta-2 chain-like [Glycin...   209   2e-52
sp|P12460.1|TBB2_SOYBN RecName: Full=Tubulin beta-2 chain; AltNa...   207   5e-52
gb|AGE44289.1| beta-tubulin [Dimocarpus longan]                       206   2e-51
gb|AAA32886.1| beta-8 tubulin [Arabidopsis thaliana]                  206   2e-51

>ref|XP_003520939.1| PREDICTED: tubulin beta-2 chain-like [Glycine max]
          Length = 449

 Score =  209 bits (531), Expect = 2e-52
 Identities = 100/102 (98%), Positives = 101/102 (99%)
 Frame = +3

Query: 3   KNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMILVQNKNSSYFVEWIPHNVKSTVCDI 182
           KNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMI VQNKNSSYFVEWIPHNVKSTVCDI
Sbjct: 297 KNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPHNVKSTVCDI 356

Query: 183 PPTGLKMAATFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWY 308
           PPTGLKMA+TFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWY
Sbjct: 357 PPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWY 398


>ref|XP_003516925.1| PREDICTED: tubulin beta-2 chain-like [Glycine max]
          Length = 449

 Score =  209 bits (531), Expect = 2e-52
 Identities = 100/102 (98%), Positives = 101/102 (99%)
 Frame = +3

Query: 3   KNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMILVQNKNSSYFVEWIPHNVKSTVCDI 182
           KNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMI VQNKNSSYFVEWIPHNVKSTVCDI
Sbjct: 297 KNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPHNVKSTVCDI 356

Query: 183 PPTGLKMAATFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWY 308
           PPTGLKMA+TFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWY
Sbjct: 357 PPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWY 398


>sp|P12460.1|TBB2_SOYBN RecName: Full=Tubulin beta-2 chain; AltName: Full=Beta-2-tubulin
           gi|170062|gb|AAA34010.1| S-beta-1 tubulin [Glycine max]
          Length = 449

 Score =  207 bits (528), Expect = 5e-52
 Identities = 99/102 (97%), Positives = 101/102 (99%)
 Frame = +3

Query: 3   KNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMILVQNKNSSYFVEWIPHNVKSTVCDI 182
           KNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMI VQNKNSSYFVEWIPHNVKSTVCDI
Sbjct: 297 KNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPHNVKSTVCDI 356

Query: 183 PPTGLKMAATFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWY 308
           PPTGL+MA+TFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWY
Sbjct: 357 PPTGLRMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWY 398


>gb|AGE44289.1| beta-tubulin [Dimocarpus longan]
          Length = 446

 Score =  206 bits (524), Expect = 2e-51
 Identities = 99/102 (97%), Positives = 101/102 (99%)
 Frame = +3

Query: 3   KNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMILVQNKNSSYFVEWIPHNVKSTVCDI 182
           KNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMI VQNKNSSYFVEWIP+NVKSTVCDI
Sbjct: 297 KNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDI 356

Query: 183 PPTGLKMAATFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWY 308
           PPTGLKMA+TFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWY
Sbjct: 357 PPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWY 398


>gb|AAA32886.1| beta-8 tubulin [Arabidopsis thaliana]
          Length = 449

 Score =  206 bits (524), Expect = 2e-51
 Identities = 99/102 (97%), Positives = 101/102 (99%)
 Frame = +3

Query: 3   KNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMILVQNKNSSYFVEWIPHNVKSTVCDI 182
           KNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMI VQNKNSSYFVEWIP+NVKSTVCDI
Sbjct: 297 KNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDI 356

Query: 183 PPTGLKMAATFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWY 308
           PPTGLKMA+TFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWY
Sbjct: 357 PPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWY 398


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