BLASTX nr result
ID: Dioscorea21_contig00005917
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00005917
(1409 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABF69974.1| amine oxidase family protein [Musa acuminata] 412 e-162
dbj|BAM17621.1| putative Crystal Structure Of Lsd1 [Oryza sativa... 390 e-158
ref|NP_001053923.1| Os04g0623300 [Oryza sativa Japonica Group] g... 390 e-158
gb|EEC78042.1| hypothetical protein OsI_17477 [Oryza sativa Indi... 389 e-158
emb|CAH66792.1| H0215F08.3 [Oryza sativa Indica Group] 389 e-158
>gb|ABF69974.1| amine oxidase family protein [Musa acuminata]
Length = 518
Score = 412 bits (1060), Expect(2) = e-162
Identities = 203/250 (81%), Positives = 224/250 (89%), Gaps = 3/250 (1%)
Frame = +2
Query: 458 RVTNIIRGKKGVEITVENGKTFVADAAIVTVPLGVLKSKSIKFEPRLPEWKEEAINDIGV 637
RVT I+RGKKGVE+TV N K+F ADAAI+TVPLGVLK+KSIKFEPRLPEWKE AI+ IGV
Sbjct: 269 RVTKIVRGKKGVEVTVNNDKSFFADAAIITVPLGVLKAKSIKFEPRLPEWKEAAIDGIGV 328
Query: 638 GTENKIALHFEKVFWPNVEFLGVVSATTYGCSYFLNLHKATGHPVLVYMPAGRLAHDIEK 817
G ENKI LHF+KVFWPNVEFLGVVS+T+YGCSYFLNLHKATGHPVLVYMPAGRLA DIEK
Sbjct: 329 GVENKIVLHFDKVFWPNVEFLGVVSSTSYGCSYFLNLHKATGHPVLVYMPAGRLAQDIEK 388
Query: 818 MSDDAAARFAFSQLKEILPGASEPIQYLVSHWGTDANSLGSYSYGAVGKSYDLHERLRIP 997
MSD++AA+FAFSQLK ILP +EPIQYLVS WG D NSLGSYSY AVGK DL ERLRIP
Sbjct: 389 MSDESAAKFAFSQLKVILPDVTEPIQYLVSRWGRDENSLGSYSYDAVGKPRDLFERLRIP 448
Query: 998 VDNIFFAGEATSIKYTGSVHGAYSTGLMAAEECQMRLLEKYGE---LEMFHPVMGEEIAA 1168
VDN+FFAGEATSIKYTG+VHGA+STGLMAAEEC+MR+LEKYG+ LEMFHP M EE A+
Sbjct: 449 VDNLFFAGEATSIKYTGTVHGAFSTGLMAAEECRMRVLEKYGDLENLEMFHPSMDEEAAS 508
Query: 1169 VSAPLLISRM 1198
+S PLLISRM
Sbjct: 509 ISVPLLISRM 518
Score = 187 bits (474), Expect(2) = e-162
Identities = 89/124 (71%), Positives = 103/124 (83%)
Frame = +3
Query: 3 ALFDTDGHQVPQDLVERVGQVFQKILDKADKLRQENTNDMSVAQAITIVMDRHPELKQEG 182
ALFD DG QVPQ+LV++VG+ A+K+R E T DMSVAQAI +V++R P+L+QEG
Sbjct: 154 ALFDADGRQVPQELVQKVGE--------ANKVRHETTEDMSVAQAIALVLERDPDLRQEG 205
Query: 183 LAYKVLQWYLCRMEGWFAADADTISLKNWDQEVLLPGGHGLMVRGYRPVLTTLARGLDIR 362
LA VLQWYLCRMEGWFA DAD ISLKNWDQEVLLPGGHGLMVRGYRP++ TLA+GLDIR
Sbjct: 206 LANNVLQWYLCRMEGWFATDADNISLKNWDQEVLLPGGHGLMVRGYRPIINTLAKGLDIR 265
Query: 363 LCHR 374
L HR
Sbjct: 266 LSHR 269
>dbj|BAM17621.1| putative Crystal Structure Of Lsd1 [Oryza sativa Japonica Group]
gi|389608052|dbj|BAM17633.1| putative Crystal Structure
Of Lsd1 [Oryza sativa Indica Group]
Length = 501
Score = 390 bits (1001), Expect(2) = e-158
Identities = 187/252 (74%), Positives = 221/252 (87%), Gaps = 3/252 (1%)
Frame = +2
Query: 452 GLRVTNIIRGKKGVEITVENGKTFVADAAIVTVPLGVLKSKSIKFEPRLPEWKEEAINDI 631
G RV I+R + VE+TV +GKTFVADAA++ VPLGVLK+ +IKFEPRLPEWKEEAI ++
Sbjct: 250 GHRVVEIVRHRNRVEVTVSSGKTFVADAAVIAVPLGVLKANTIKFEPRLPEWKEEAIREL 309
Query: 632 GVGTENKIALHFEKVFWPNVEFLGVVSATTYGCSYFLNLHKATGHPVLVYMPAGRLAHDI 811
VG ENKI LHF +VFWPNVEFLGVVS+TTYGCSYFLNLHKATGHPVLVYMPAGRLA DI
Sbjct: 310 SVGVENKIILHFSEVFWPNVEFLGVVSSTTYGCSYFLNLHKATGHPVLVYMPAGRLACDI 369
Query: 812 EKMSDDAAARFAFSQLKEILPGASEPIQYLVSHWGTDANSLGSYSYGAVGKSYDLHERLR 991
EK+SD+AAA+FAFSQLK+ILP A+EPI YLVSHWG+D N+LGSY++ VGK DL+E+LR
Sbjct: 370 EKLSDEAAAQFAFSQLKKILPNAAEPIHYLVSHWGSDENTLGSYTFDGVGKPRDLYEKLR 429
Query: 992 IPVDNIFFAGEATSIKYTGSVHGAYSTGLMAAEECQMRLLEKYGE---LEMFHPVMGEEI 1162
IPVDN+FFAGEATS++YTG+VHGA+STGLMAAEEC+MR+LE++ E LEM HP MGE+
Sbjct: 430 IPVDNLFFAGEATSVQYTGTVHGAFSTGLMAAEECRMRVLERFRELDMLEMCHPAMGEQT 489
Query: 1163 AAVSAPLLISRM 1198
A VS PLLISR+
Sbjct: 490 ATVSVPLLISRL 501
Score = 197 bits (502), Expect(2) = e-158
Identities = 91/128 (71%), Positives = 111/128 (86%)
Frame = +3
Query: 3 ALFDTDGHQVPQDLVERVGQVFQKILDKADKLRQENTNDMSVAQAITIVMDRHPELKQEG 182
AL+DT GHQVPQ+LVE++G+VF+ IL++ KLR+E D+S+A+AI IVM+R+P L+QEG
Sbjct: 129 ALYDTKGHQVPQELVEKIGKVFETILEETGKLREETKEDISIAKAIAIVMERNPHLRQEG 188
Query: 183 LAYKVLQWYLCRMEGWFAADADTISLKNWDQEVLLPGGHGLMVRGYRPVLTTLARGLDIR 362
+A+ VLQWYLCRMEGWFA DAD ISL+ WDQEVLLPGGHGLMVRGYRPV+ TLA+GLDIR
Sbjct: 189 IAHDVLQWYLCRMEGWFATDADAISLQGWDQEVLLPGGHGLMVRGYRPVINTLAKGLDIR 248
Query: 363 LCHRYVFI 386
L HR V I
Sbjct: 249 LGHRVVEI 256
>ref|NP_001053923.1| Os04g0623300 [Oryza sativa Japonica Group]
gi|38344167|emb|CAE03498.2| OSJNBa0053K19.6 [Oryza sativa
Japonica Group] gi|38345715|emb|CAD41837.2|
OSJNBb0085C12.17 [Oryza sativa Japonica Group]
gi|113565494|dbj|BAF15837.1| Os04g0623300 [Oryza sativa
Japonica Group] gi|222629583|gb|EEE61715.1| hypothetical
protein OsJ_16215 [Oryza sativa Japonica Group]
Length = 484
Score = 390 bits (1001), Expect(2) = e-158
Identities = 187/252 (74%), Positives = 221/252 (87%), Gaps = 3/252 (1%)
Frame = +2
Query: 452 GLRVTNIIRGKKGVEITVENGKTFVADAAIVTVPLGVLKSKSIKFEPRLPEWKEEAINDI 631
G RV I+R + VE+TV +GKTFVADAA++ VPLGVLK+ +IKFEPRLPEWKEEAI ++
Sbjct: 233 GHRVVEIVRHRNRVEVTVSSGKTFVADAAVIAVPLGVLKANTIKFEPRLPEWKEEAIREL 292
Query: 632 GVGTENKIALHFEKVFWPNVEFLGVVSATTYGCSYFLNLHKATGHPVLVYMPAGRLAHDI 811
VG ENKI LHF +VFWPNVEFLGVVS+TTYGCSYFLNLHKATGHPVLVYMPAGRLA DI
Sbjct: 293 SVGVENKIILHFSEVFWPNVEFLGVVSSTTYGCSYFLNLHKATGHPVLVYMPAGRLACDI 352
Query: 812 EKMSDDAAARFAFSQLKEILPGASEPIQYLVSHWGTDANSLGSYSYGAVGKSYDLHERLR 991
EK+SD+AAA+FAFSQLK+ILP A+EPI YLVSHWG+D N+LGSY++ VGK DL+E+LR
Sbjct: 353 EKLSDEAAAQFAFSQLKKILPNAAEPIHYLVSHWGSDENTLGSYTFDGVGKPRDLYEKLR 412
Query: 992 IPVDNIFFAGEATSIKYTGSVHGAYSTGLMAAEECQMRLLEKYGE---LEMFHPVMGEEI 1162
IPVDN+FFAGEATS++YTG+VHGA+STGLMAAEEC+MR+LE++ E LEM HP MGE+
Sbjct: 413 IPVDNLFFAGEATSVQYTGTVHGAFSTGLMAAEECRMRVLERFRELDMLEMCHPAMGEQT 472
Query: 1163 AAVSAPLLISRM 1198
A VS PLLISR+
Sbjct: 473 ATVSVPLLISRL 484
Score = 197 bits (502), Expect(2) = e-158
Identities = 91/128 (71%), Positives = 111/128 (86%)
Frame = +3
Query: 3 ALFDTDGHQVPQDLVERVGQVFQKILDKADKLRQENTNDMSVAQAITIVMDRHPELKQEG 182
AL+DT GHQVPQ+LVE++G+VF+ IL++ KLR+E D+S+A+AI IVM+R+P L+QEG
Sbjct: 112 ALYDTKGHQVPQELVEKIGKVFETILEETGKLREETKEDISIAKAIAIVMERNPHLRQEG 171
Query: 183 LAYKVLQWYLCRMEGWFAADADTISLKNWDQEVLLPGGHGLMVRGYRPVLTTLARGLDIR 362
+A+ VLQWYLCRMEGWFA DAD ISL+ WDQEVLLPGGHGLMVRGYRPV+ TLA+GLDIR
Sbjct: 172 IAHDVLQWYLCRMEGWFATDADAISLQGWDQEVLLPGGHGLMVRGYRPVINTLAKGLDIR 231
Query: 363 LCHRYVFI 386
L HR V I
Sbjct: 232 LGHRVVEI 239
>gb|EEC78042.1| hypothetical protein OsI_17477 [Oryza sativa Indica Group]
Length = 484
Score = 389 bits (998), Expect(2) = e-158
Identities = 187/252 (74%), Positives = 220/252 (87%), Gaps = 3/252 (1%)
Frame = +2
Query: 452 GLRVTNIIRGKKGVEITVENGKTFVADAAIVTVPLGVLKSKSIKFEPRLPEWKEEAINDI 631
G RV I+R + VE+TV +GKTFVADAA++ VPLGVLK+ +IKFEPRLPEWKEEAI +
Sbjct: 233 GHRVVEIVRHRNRVEVTVSSGKTFVADAAVIAVPLGVLKANTIKFEPRLPEWKEEAIRKL 292
Query: 632 GVGTENKIALHFEKVFWPNVEFLGVVSATTYGCSYFLNLHKATGHPVLVYMPAGRLAHDI 811
VG ENKI LHF +VFWPNVEFLGVVS+TTYGCSYFLNLHKATGHPVLVYMPAGRLA DI
Sbjct: 293 SVGVENKIILHFSEVFWPNVEFLGVVSSTTYGCSYFLNLHKATGHPVLVYMPAGRLACDI 352
Query: 812 EKMSDDAAARFAFSQLKEILPGASEPIQYLVSHWGTDANSLGSYSYGAVGKSYDLHERLR 991
EK+SD+AAA+FAFSQLK+ILP A+EPI YLVSHWG+D N+LGSY++ VGK DL+E+LR
Sbjct: 353 EKLSDEAAAQFAFSQLKKILPNAAEPIHYLVSHWGSDENTLGSYTFDGVGKPRDLYEKLR 412
Query: 992 IPVDNIFFAGEATSIKYTGSVHGAYSTGLMAAEECQMRLLEKYGE---LEMFHPVMGEEI 1162
IPVDN+FFAGEATS++YTG+VHGA+STGLMAAEEC+MR+LE++ E LEM HP MGE+
Sbjct: 413 IPVDNLFFAGEATSVQYTGTVHGAFSTGLMAAEECRMRVLERFRELDMLEMCHPAMGEQT 472
Query: 1163 AAVSAPLLISRM 1198
A VS PLLISR+
Sbjct: 473 ATVSVPLLISRL 484
Score = 197 bits (502), Expect(2) = e-158
Identities = 91/128 (71%), Positives = 111/128 (86%)
Frame = +3
Query: 3 ALFDTDGHQVPQDLVERVGQVFQKILDKADKLRQENTNDMSVAQAITIVMDRHPELKQEG 182
AL+DT GHQVPQ+LVE++G+VF+ IL++ KLR+E D+S+A+AI IVM+R+P L+QEG
Sbjct: 112 ALYDTKGHQVPQELVEKIGKVFETILEETGKLREETKEDISIAKAIAIVMERNPHLRQEG 171
Query: 183 LAYKVLQWYLCRMEGWFAADADTISLKNWDQEVLLPGGHGLMVRGYRPVLTTLARGLDIR 362
+A+ VLQWYLCRMEGWFA DAD ISL+ WDQEVLLPGGHGLMVRGYRPV+ TLA+GLDIR
Sbjct: 172 IAHDVLQWYLCRMEGWFATDADAISLQGWDQEVLLPGGHGLMVRGYRPVINTLAKGLDIR 231
Query: 363 LCHRYVFI 386
L HR V I
Sbjct: 232 LGHRVVEI 239
>emb|CAH66792.1| H0215F08.3 [Oryza sativa Indica Group]
Length = 484
Score = 389 bits (998), Expect(2) = e-158
Identities = 186/252 (73%), Positives = 221/252 (87%), Gaps = 3/252 (1%)
Frame = +2
Query: 452 GLRVTNIIRGKKGVEITVENGKTFVADAAIVTVPLGVLKSKSIKFEPRLPEWKEEAINDI 631
G RV I+R + VE+TV +G+TFVADAA++ VPLGVLK+ +IKFEPRLPEWKEEAI ++
Sbjct: 233 GHRVVEIVRHRNRVEVTVSSGRTFVADAAVIAVPLGVLKANTIKFEPRLPEWKEEAIREL 292
Query: 632 GVGTENKIALHFEKVFWPNVEFLGVVSATTYGCSYFLNLHKATGHPVLVYMPAGRLAHDI 811
VG ENKI LHF +VFWPNVEFLGVVS+TTYGCSYFLNLHKATGHPVLVYMPAGRLA DI
Sbjct: 293 SVGVENKIILHFSEVFWPNVEFLGVVSSTTYGCSYFLNLHKATGHPVLVYMPAGRLACDI 352
Query: 812 EKMSDDAAARFAFSQLKEILPGASEPIQYLVSHWGTDANSLGSYSYGAVGKSYDLHERLR 991
EK+SD+AAA+FAFSQLK+ILP A+EPI YLVSHWG+D N+LGSY++ VGK DL+E+LR
Sbjct: 353 EKLSDEAAAQFAFSQLKKILPNAAEPIHYLVSHWGSDENTLGSYTFDGVGKPRDLYEKLR 412
Query: 992 IPVDNIFFAGEATSIKYTGSVHGAYSTGLMAAEECQMRLLEKYGE---LEMFHPVMGEEI 1162
IPVDN+FFAGEATS++YTG+VHGA+STGLMAAEEC+MR+LE++ E LEM HP MGE+
Sbjct: 413 IPVDNLFFAGEATSVQYTGTVHGAFSTGLMAAEECRMRVLERFRELDMLEMCHPAMGEQT 472
Query: 1163 AAVSAPLLISRM 1198
A VS PLLISR+
Sbjct: 473 ATVSVPLLISRL 484
Score = 197 bits (502), Expect(2) = e-158
Identities = 91/128 (71%), Positives = 111/128 (86%)
Frame = +3
Query: 3 ALFDTDGHQVPQDLVERVGQVFQKILDKADKLRQENTNDMSVAQAITIVMDRHPELKQEG 182
AL+DT GHQVPQ+LVE++G+VF+ IL++ KLR+E D+S+A+AI IVM+R+P L+QEG
Sbjct: 112 ALYDTKGHQVPQELVEKIGKVFETILEETGKLREETKEDISIAKAIAIVMERNPHLRQEG 171
Query: 183 LAYKVLQWYLCRMEGWFAADADTISLKNWDQEVLLPGGHGLMVRGYRPVLTTLARGLDIR 362
+A+ VLQWYLCRMEGWFA DAD ISL+ WDQEVLLPGGHGLMVRGYRPV+ TLA+GLDIR
Sbjct: 172 IAHDVLQWYLCRMEGWFATDADAISLQGWDQEVLLPGGHGLMVRGYRPVINTLAKGLDIR 231
Query: 363 LCHRYVFI 386
L HR V I
Sbjct: 232 LGHRVVEI 239