BLASTX nr result

ID: Dioscorea21_contig00005909 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00005909
         (644 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003540566.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1...    97   2e-18
ref|XP_002510641.1| conserved hypothetical protein [Ricinus comm...    97   3e-18
ref|XP_004145533.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1...    96   4e-18
ref|XP_002301930.1| predicted protein [Populus trichocarpa] gi|2...    96   4e-18
gb|ABK96425.1| unknown [Populus trichocarpa x Populus deltoides]       96   4e-18

>ref|XP_003540566.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex
           subunit 2 [Glycine max]
          Length = 67

 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 39/42 (92%), Positives = 40/42 (95%)
 Frame = -1

Query: 542 IPQPKRWHTITGKGLCAIMWFWVLYRAKQDGPVVLGWRHPWE 417
           I QPKRWHTITGKGLCA+MWFWV YRAKQDGPVVLGWRHPWE
Sbjct: 16  IHQPKRWHTITGKGLCAVMWFWVFYRAKQDGPVVLGWRHPWE 57


>ref|XP_002510641.1| conserved hypothetical protein [Ricinus communis]
           gi|223551342|gb|EEF52828.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 69

 Score = 97.1 bits (240), Expect = 3e-18
 Identities = 38/42 (90%), Positives = 41/42 (97%)
 Frame = -1

Query: 542 IPQPKRWHTITGKGLCAIMWFWVLYRAKQDGPVVLGWRHPWE 417
           I QPKRWH+ITGKGLCA+MWFW+LYRAKQDGPVVLGWRHPWE
Sbjct: 16  IHQPKRWHSITGKGLCAVMWFWILYRAKQDGPVVLGWRHPWE 57


>ref|XP_004145533.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex
           subunit 2-like isoform 1 [Cucumis sativus]
           gi|449455587|ref|XP_004145534.1| PREDICTED: NADH
           dehydrogenase [ubiquinone] 1 beta subcomplex subunit
           2-like isoform 2 [Cucumis sativus]
           gi|449485133|ref|XP_004157078.1| PREDICTED: NADH
           dehydrogenase [ubiquinone] 1 beta subcomplex subunit
           2-like isoform 1 [Cucumis sativus]
           gi|449485137|ref|XP_004157079.1| PREDICTED: NADH
           dehydrogenase [ubiquinone] 1 beta subcomplex subunit
           2-like isoform 2 [Cucumis sativus]
          Length = 69

 Score = 96.3 bits (238), Expect = 4e-18
 Identities = 38/42 (90%), Positives = 40/42 (95%)
 Frame = -1

Query: 542 IPQPKRWHTITGKGLCAIMWFWVLYRAKQDGPVVLGWRHPWE 417
           I  PKRWHT+TGKGLCA+MWFWVLYRAKQDGPVVLGWRHPWE
Sbjct: 17  IHPPKRWHTVTGKGLCAVMWFWVLYRAKQDGPVVLGWRHPWE 58


>ref|XP_002301930.1| predicted protein [Populus trichocarpa] gi|222843656|gb|EEE81203.1|
           predicted protein [Populus trichocarpa]
          Length = 68

 Score = 96.3 bits (238), Expect = 4e-18
 Identities = 37/40 (92%), Positives = 40/40 (100%)
 Frame = -1

Query: 536 QPKRWHTITGKGLCAIMWFWVLYRAKQDGPVVLGWRHPWE 417
           +PKRWHT+TGKGLCA+MWFWVLYRAKQDGPVVLGWRHPWE
Sbjct: 18  KPKRWHTVTGKGLCAVMWFWVLYRAKQDGPVVLGWRHPWE 57


>gb|ABK96425.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 68

 Score = 96.3 bits (238), Expect = 4e-18
 Identities = 37/40 (92%), Positives = 40/40 (100%)
 Frame = -1

Query: 536 QPKRWHTITGKGLCAIMWFWVLYRAKQDGPVVLGWRHPWE 417
           +PKRWHT+TGKGLCA+MWFWVLYRAKQDGPVVLGWRHPWE
Sbjct: 18  KPKRWHTVTGKGLCAVMWFWVLYRAKQDGPVVLGWRHPWE 57


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