BLASTX nr result

ID: Dioscorea21_contig00005877 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00005877
         (545 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003570126.1| PREDICTED: glycine cleavage system H protein...   229   2e-58
ref|XP_002278252.1| PREDICTED: glycine cleavage system H protein...   229   3e-58
ref|NP_001058315.1| Os06g0667600 [Oryza sativa Japonica Group] g...   227   1e-57
gb|AFK36203.1| unknown [Lotus japonicus]                              227   1e-57
ref|XP_002451618.1| hypothetical protein SORBIDRAFT_04g004720 [S...   227   1e-57

>ref|XP_003570126.1| PREDICTED: glycine cleavage system H protein, mitochondrial-like
           [Brachypodium distachyon]
          Length = 158

 Score =  229 bits (585), Expect = 2e-58
 Identities = 111/139 (79%), Positives = 123/139 (88%)
 Frame = +1

Query: 70  ISTFNRSFSSVLKDLKYAETHEWVKVDGSSATIGITDHAQDHLGDVVYVELPDVGNAVSQ 249
           ISTF R+FS+VLKDLKYAETHEWVKV+G  AT+GITDHAQDHLGDVVYVELP+VG  VSQ
Sbjct: 20  ISTFPRAFSTVLKDLKYAETHEWVKVEGDLATVGITDHAQDHLGDVVYVELPEVGTCVSQ 79

Query: 250 GKSFGAVESVKATSDINSPISGEVIDVNTELNGSPGLVNASPYDKGWIIKVQIKDEHELD 429
           G +FGAVESVKATSDINSPISGEVI VN EL   PGLVNA+PY+ GWIIKV++KD  EL+
Sbjct: 80  GNNFGAVESVKATSDINSPISGEVIAVNDELTEKPGLVNANPYEGGWIIKVKVKDAGELN 139

Query: 430 SLMDSEKYAKFCEEEDAKH 486
           SLMD EKY+KFCEEED KH
Sbjct: 140 SLMDDEKYSKFCEEEDGKH 158


>ref|XP_002278252.1| PREDICTED: glycine cleavage system H protein, mitochondrial [Vitis
           vinifera] gi|297737954|emb|CBI27155.3| unnamed protein
           product [Vitis vinifera]
          Length = 154

 Score =  229 bits (583), Expect = 3e-58
 Identities = 106/139 (76%), Positives = 125/139 (89%)
 Frame = +1

Query: 70  ISTFNRSFSSVLKDLKYAETHEWVKVDGSSATIGITDHAQDHLGDVVYVELPDVGNAVSQ 249
           +S F+R FSSV+KDLKYA++HEWVK+DG+SA +GITDHAQDHLGDVVYVELP+ G AV+Q
Sbjct: 16  LSVFHRGFSSVVKDLKYADSHEWVKIDGNSAIVGITDHAQDHLGDVVYVELPEAGAAVNQ 75

Query: 250 GKSFGAVESVKATSDINSPISGEVIDVNTELNGSPGLVNASPYDKGWIIKVQIKDEHELD 429
           G  FGAVESVKATSDINSP+SG+V++VN ELN SPGLVNASPY+ GWIIKV++ D  EL+
Sbjct: 76  GSGFGAVESVKATSDINSPVSGKVVEVNEELNSSPGLVNASPYENGWIIKVEMSDTGELN 135

Query: 430 SLMDSEKYAKFCEEEDAKH 486
           SLMDSE+Y KFCEEEDAKH
Sbjct: 136 SLMDSEQYTKFCEEEDAKH 154


>ref|NP_001058315.1| Os06g0667600 [Oryza sativa Japonica Group]
           gi|52075823|dbj|BAD45431.1| putative glycine
           decarboxylase complex H-protein [Oryza sativa Japonica
           Group] gi|52076539|dbj|BAD45416.1| putative glycine
           decarboxylase complex H-protein [Oryza sativa Japonica
           Group] gi|113596355|dbj|BAF20229.1| Os06g0667600 [Oryza
           sativa Japonica Group] gi|215701162|dbj|BAG92586.1|
           unnamed protein product [Oryza sativa Japonica Group]
           gi|215765054|dbj|BAG86751.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|218198716|gb|EEC81143.1| hypothetical protein
           OsI_24045 [Oryza sativa Indica Group]
           gi|222636053|gb|EEE66185.1| hypothetical protein
           OsJ_22296 [Oryza sativa Japonica Group]
          Length = 160

 Score =  227 bits (578), Expect = 1e-57
 Identities = 106/139 (76%), Positives = 123/139 (88%)
 Frame = +1

Query: 70  ISTFNRSFSSVLKDLKYAETHEWVKVDGSSATIGITDHAQDHLGDVVYVELPDVGNAVSQ 249
           IS+F R+FS+VLKDLKYA+THEWVKV+G SATIG+TDHAQDHLGDVVYVELP+VG+ VSQ
Sbjct: 22  ISSFPRAFSTVLKDLKYADTHEWVKVEGDSATIGVTDHAQDHLGDVVYVELPEVGSTVSQ 81

Query: 250 GKSFGAVESVKATSDINSPISGEVIDVNTELNGSPGLVNASPYDKGWIIKVQIKDEHELD 429
           G +FGAVESVKATSDIN+P+SGE+I VN EL+  PG +N SPY+KGWIIKV+I D  EL+
Sbjct: 82  GTNFGAVESVKATSDINAPVSGEIIQVNDELSEKPGFINGSPYEKGWIIKVKISDPSELN 141

Query: 430 SLMDSEKYAKFCEEEDAKH 486
           SLMD EKY KFCEEED KH
Sbjct: 142 SLMDDEKYKKFCEEEDGKH 160


>gb|AFK36203.1| unknown [Lotus japonicus]
          Length = 155

 Score =  227 bits (578), Expect = 1e-57
 Identities = 105/139 (75%), Positives = 125/139 (89%)
 Frame = +1

Query: 70  ISTFNRSFSSVLKDLKYAETHEWVKVDGSSATIGITDHAQDHLGDVVYVELPDVGNAVSQ 249
           IS FNR+FSSV+KDLKYA++HEWVKVDG+SAT+GITDHAQDHLGDVVYVELP+VG  V+Q
Sbjct: 17  ISVFNRAFSSVVKDLKYADSHEWVKVDGNSATVGITDHAQDHLGDVVYVELPEVGTEVTQ 76

Query: 250 GKSFGAVESVKATSDINSPISGEVIDVNTELNGSPGLVNASPYDKGWIIKVQIKDEHELD 429
           G  FGAVESVKATSDINSP+SG+V++VN ELN SP  VN+SPY+ GWIIKV++ D  EL 
Sbjct: 77  GGGFGAVESVKATSDINSPVSGKVVEVNEELNSSPAKVNSSPYEDGWIIKVELSDSSELS 136

Query: 430 SLMDSEKYAKFCEEEDAKH 486
           +LMDSE+Y+KFCEEED+KH
Sbjct: 137 NLMDSEQYSKFCEEEDSKH 155


>ref|XP_002451618.1| hypothetical protein SORBIDRAFT_04g004720 [Sorghum bicolor]
           gi|241931449|gb|EES04594.1| hypothetical protein
           SORBIDRAFT_04g004720 [Sorghum bicolor]
          Length = 158

 Score =  227 bits (578), Expect = 1e-57
 Identities = 107/136 (78%), Positives = 126/136 (92%)
 Frame = +1

Query: 70  ISTFNRSFSSVLKDLKYAETHEWVKVDGSSATIGITDHAQDHLGDVVYVELPDVGNAVSQ 249
           ISTF R+FS+VLKDLKYA+THEWVKV+G SAT+GITDHAQDHLGDVVYVELP+VG +VSQ
Sbjct: 21  ISTFPRAFSTVLKDLKYADTHEWVKVEGDSATVGITDHAQDHLGDVVYVELPEVGISVSQ 80

Query: 250 GKSFGAVESVKATSDINSPISGEVIDVNTELNGSPGLVNASPYDKGWIIKVQIKDEHELD 429
           GK+FGAVESVKATSDINSP+SGEV++VN +L+  PGLVNASPY+KGWIIKV++ D  EL+
Sbjct: 81  GKNFGAVESVKATSDINSPVSGEVVEVNNKLSEEPGLVNASPYEKGWIIKVKLSDSGELN 140

Query: 430 SLMDSEKYAKFCEEED 477
           SLM+ EKY+KFCEEED
Sbjct: 141 SLMNDEKYSKFCEEED 156


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