BLASTX nr result

ID: Dioscorea21_contig00005876 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00005876
         (2048 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321296.1| predicted protein [Populus trichocarpa] gi|2...   527   e-147
ref|XP_002271401.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1...   523   e-146
ref|XP_002526534.1| NADH-ubiquinone oxidoreductase 39 kD subunit...   519   e-144
ref|XP_002301843.1| predicted protein [Populus trichocarpa] gi|2...   517   e-144
gb|ABK94679.1| unknown [Populus trichocarpa]                          513   e-143

>ref|XP_002321296.1| predicted protein [Populus trichocarpa] gi|222862069|gb|EEE99611.1|
            predicted protein [Populus trichocarpa]
          Length = 394

 Score =  527 bits (1357), Expect = e-147
 Identities = 274/383 (71%), Positives = 304/383 (79%)
 Frame = -2

Query: 1501 SGRLLDQSPAIAALKSQWPIFSSGAGCEFEQCRYGSTLSVKGTGHLVRKGTGGRSSVSGI 1322
            S RL  +SP I++ KS +P+     G +    RYGSTL+ +G GHL+RKGTGGRSSVSGI
Sbjct: 5    SRRLGHRSP-ISSFKSIYPLSDHLYGADHP--RYGSTLATRGVGHLIRKGTGGRSSVSGI 61

Query: 1321 VSTVFGATGFLGRYVVQQLAKMGSQVLVPFRGSEDSHRHLKLMGDLGQIVPMKYNPRDEN 1142
            V+TVFGATGFLGRYVVQQLAKMGSQVLVPFRGS+D  RHLKLMGDLGQIVPMKYNPRDEN
Sbjct: 62   VATVFGATGFLGRYVVQQLAKMGSQVLVPFRGSDDDPRHLKLMGDLGQIVPMKYNPRDEN 121

Query: 1141 SIXXXXXXXXXXXNLIGREYETRNFSFEEVNHHIAEHLAVIAKEHGGIARFIQIXXXXXX 962
            SI           NLIGR+YETRN+SFEE+NH +A  LA+I+KEHGGI RFIQ+      
Sbjct: 122  SIKAVMAKANVVINLIGRDYETRNYSFEELNHAMAGQLAMISKEHGGIMRFIQVSCLGAS 181

Query: 961  XXXXXXXXXXXXXAEEAVLREFPEATVMKPATMIGTEDRILNTWAHFVKKWSFLPLVGDG 782
                          EEAVLRE PEATVMKPA MIGTEDRILN WAHF KK+SFLPL+GDG
Sbjct: 182  ASSPSRLLRAKAAGEEAVLREMPEATVMKPAVMIGTEDRILNRWAHFTKKYSFLPLIGDG 241

Query: 781  STKIQPVHVVDVAAAIMASLKDDGTSMGKTYELGGPEIFTVHQLAELMYDTIREWPRYVN 602
            STKIQPV+VVD+AAAI+A+LKDDGTSMGK YELGGPEIFTVH+LAELMYD IREWPRYV 
Sbjct: 242  STKIQPVYVVDIAAAIIAALKDDGTSMGKVYELGGPEIFTVHELAELMYDVIREWPRYVK 301

Query: 601  VPVPIAKAFATPREFLLKKVXXXXXXXXXXXLDQIESLTVDTVVSEKALTFNDLGIVPHK 422
            VP PIAKAFATPRE LL KV           LD+I SLT+DTVVSE ALTF+DLGIVPHK
Sbjct: 302  VPFPIAKAFATPREILLNKVPFPLPNPKMFNLDEINSLTMDTVVSENALTFSDLGIVPHK 361

Query: 421  LKGYPVEYLISYRKGGPAFGSTV 353
            LKGYPVE+LISYRKGGP FGST+
Sbjct: 362  LKGYPVEFLISYRKGGPQFGSTI 384


>ref|XP_002271401.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit
            9, mitochondrial [Vitis vinifera]
            gi|297744229|emb|CBI37199.3| unnamed protein product
            [Vitis vinifera]
          Length = 399

 Score =  523 bits (1347), Expect = e-146
 Identities = 272/386 (70%), Positives = 301/386 (77%), Gaps = 1/386 (0%)
 Frame = -2

Query: 1507 RRSG-RLLDQSPAIAALKSQWPIFSSGAGCEFEQCRYGSTLSVKGTGHLVRKGTGGRSSV 1331
            RR G +  +QSPAI++LKS +P+     G +    R GSTL+ KG GHLVRKGTGGRSSV
Sbjct: 6    RRLGHQSFNQSPAISSLKSIYPLSDHYYGADHP--RLGSTLAPKGVGHLVRKGTGGRSSV 63

Query: 1330 SGIVSTVFGATGFLGRYVVQQLAKMGSQVLVPFRGSEDSHRHLKLMGDLGQIVPMKYNPR 1151
            SGIV+ VFGATGFLGRYVVQQLAKMGSQVLVPFRGSEDSHRHLKLMGDLGQIVPMKYNPR
Sbjct: 64   SGIVAVVFGATGFLGRYVVQQLAKMGSQVLVPFRGSEDSHRHLKLMGDLGQIVPMKYNPR 123

Query: 1150 DENSIXXXXXXXXXXXNLIGREYETRNFSFEEVNHHIAEHLAVIAKEHGGIARFIQIXXX 971
            DENSI           NLIGREYETRN+SFEEVNHH+AE LA+I+KEHGGI RFIQ+   
Sbjct: 124  DENSIKAVMAKANVVLNLIGREYETRNYSFEEVNHHMAEQLAMISKEHGGIMRFIQVSCL 183

Query: 970  XXXXXXXXXXXXXXXXAEEAVLREFPEATVMKPATMIGTEDRILNTWAHFVKKWSFLPLV 791
                            AEEAVLRE PEAT+M+PA MIGTEDRILN WA F KK+ FLPL 
Sbjct: 184  GASPSSPSRMLMAKAAAEEAVLRELPEATIMRPAVMIGTEDRILNRWAQFAKKYGFLPLY 243

Query: 790  GDGSTKIQPVHVVDVAAAIMASLKDDGTSMGKTYELGGPEIFTVHQLAELMYDTIREWPR 611
            GDGSTK QPV+V+DVAAAIMA+LKDDGTSMGK YELGGPEIFT+H+LA +MYDTIREWPR
Sbjct: 244  GDGSTKFQPVYVIDVAAAIMAALKDDGTSMGKVYELGGPEIFTMHELAAVMYDTIREWPR 303

Query: 610  YVNVPVPIAKAFATPREFLLKKVXXXXXXXXXXXLDQIESLTVDTVVSEKALTFNDLGIV 431
            YV VP PIAKA   PRE LL KV           LD I + T DTVVSE ALTF+DLGIV
Sbjct: 304  YVKVPFPIAKAMTLPREILLNKVPFPLPTPGLFNLDLINAFTSDTVVSENALTFDDLGIV 363

Query: 430  PHKLKGYPVEYLISYRKGGPAFGSTV 353
            PHKLKGYP+E+L+SYRKGGP FGST+
Sbjct: 364  PHKLKGYPIEFLLSYRKGGPQFGSTI 389


>ref|XP_002526534.1| NADH-ubiquinone oxidoreductase 39 kD subunit, putative [Ricinus
            communis] gi|223534095|gb|EEF35812.1| NADH-ubiquinone
            oxidoreductase 39 kD subunit, putative [Ricinus communis]
          Length = 394

 Score =  519 bits (1337), Expect = e-144
 Identities = 275/387 (71%), Positives = 307/387 (79%), Gaps = 3/387 (0%)
 Frame = -2

Query: 1507 RRSG-RLLDQSPAIAALKSQWPIFS--SGAGCEFEQCRYGSTLSVKGTGHLVRKGTGGRS 1337
            RR G ++++   +IA LKS +P+    +G G   +Q RY STL+ KG  HLVRKGTGGRS
Sbjct: 6    RRLGHKVVNSDGSIACLKSIYPLSHHYNGGG---DQSRYVSTLTPKGVAHLVRKGTGGRS 62

Query: 1336 SVSGIVSTVFGATGFLGRYVVQQLAKMGSQVLVPFRGSEDSHRHLKLMGDLGQIVPMKYN 1157
            SVSGIV+TVFGATGFLGRYVVQ+LAKMGSQVLVPFRGSEDSHRHLKLMGDLGQIVPMKYN
Sbjct: 63   SVSGIVATVFGATGFLGRYVVQRLAKMGSQVLVPFRGSEDSHRHLKLMGDLGQIVPMKYN 122

Query: 1156 PRDENSIXXXXXXXXXXXNLIGREYETRNFSFEEVNHHIAEHLAVIAKEHGGIARFIQIX 977
            PRDE SI           NLIGREYETRN+SFEEVNH +AE LA+IAKEHGGI R+IQ+ 
Sbjct: 123  PRDEASIKAVMAKANVVINLIGREYETRNYSFEEVNHGMAEQLAMIAKEHGGIMRYIQVS 182

Query: 976  XXXXXXXXXXXXXXXXXXAEEAVLREFPEATVMKPATMIGTEDRILNTWAHFVKKWSFLP 797
                              AEEAVLRE PEATVMKPA MIGTEDRILN WAHFVKK+SFLP
Sbjct: 183  CLGSSSSSPSRMLRAKAAAEEAVLREIPEATVMKPAAMIGTEDRILNKWAHFVKKYSFLP 242

Query: 796  LVGDGSTKIQPVHVVDVAAAIMASLKDDGTSMGKTYELGGPEIFTVHQLAELMYDTIREW 617
            L GDGSTK+QPV+VVDVAAAI+A+LKDDG+SMGK YELGGPEI TVH+LAE+M+D IREW
Sbjct: 243  LFGDGSTKLQPVYVVDVAAAIIAALKDDGSSMGKIYELGGPEILTVHELAEIMFDMIREW 302

Query: 616  PRYVNVPVPIAKAFATPREFLLKKVXXXXXXXXXXXLDQIESLTVDTVVSEKALTFNDLG 437
            PRYV VP PIAKA ATPRE L+ KV           LD+I +LT+DTVVSE ALTF+DLG
Sbjct: 303  PRYVKVPFPIAKAIATPREVLINKVPFPLPTPNIFNLDEIIALTMDTVVSENALTFHDLG 362

Query: 436  IVPHKLKGYPVEYLISYRKGGPAFGST 356
            I+PHKLKGYPVEYLISYRKGGP FGST
Sbjct: 363  IMPHKLKGYPVEYLISYRKGGPQFGST 389


>ref|XP_002301843.1| predicted protein [Populus trichocarpa] gi|222843569|gb|EEE81116.1|
            predicted protein [Populus trichocarpa]
          Length = 399

 Score =  517 bits (1331), Expect = e-144
 Identities = 265/386 (68%), Positives = 304/386 (78%), Gaps = 1/386 (0%)
 Frame = -2

Query: 1507 RRSG-RLLDQSPAIAALKSQWPIFSSGAGCEFEQCRYGSTLSVKGTGHLVRKGTGGRSSV 1331
            RR G + L  + ++++ KS +P+     G +    R+ S+L+ KG GHL+RKGTGGRSSV
Sbjct: 6    RRLGHQSLKPAASLSSFKSIYPLSDHHYGADHP--RHASSLAAKGVGHLIRKGTGGRSSV 63

Query: 1330 SGIVSTVFGATGFLGRYVVQQLAKMGSQVLVPFRGSEDSHRHLKLMGDLGQIVPMKYNPR 1151
            SGIV+TVFGATGFLGRYVVQQLAKMGSQVLVPFRGSEDSHRHLKLMGDLGQIVPMKYNPR
Sbjct: 64   SGIVATVFGATGFLGRYVVQQLAKMGSQVLVPFRGSEDSHRHLKLMGDLGQIVPMKYNPR 123

Query: 1150 DENSIXXXXXXXXXXXNLIGREYETRNFSFEEVNHHIAEHLAVIAKEHGGIARFIQIXXX 971
            DENSI           NLIGR++ETRN+SFEE+NH + E LA+I+KEHGGI RFIQ+   
Sbjct: 124  DENSIKAVMAKANVVINLIGRDHETRNYSFEELNHGMTEQLAMISKEHGGIMRFIQVSCL 183

Query: 970  XXXXXXXXXXXXXXXXAEEAVLREFPEATVMKPATMIGTEDRILNTWAHFVKKWSFLPLV 791
                             EEAVLRE PEATVMKPA MIGTEDRILN WAHF KK+SFLPL+
Sbjct: 184  GASASSPSRMLRAKAAGEEAVLREMPEATVMKPAVMIGTEDRILNRWAHFAKKYSFLPLI 243

Query: 790  GDGSTKIQPVHVVDVAAAIMASLKDDGTSMGKTYELGGPEIFTVHQLAELMYDTIREWPR 611
            GDGSTKIQPV+VVDVAAAI+A+LKDDG+SMGK YELGGPEIFTVH+LA+LM+D IREWPR
Sbjct: 244  GDGSTKIQPVYVVDVAAAIIAALKDDGSSMGKVYELGGPEIFTVHELADLMHDVIREWPR 303

Query: 610  YVNVPVPIAKAFATPREFLLKKVXXXXXXXXXXXLDQIESLTVDTVVSEKALTFNDLGIV 431
            YV VP PIAKA ATPR  L+ KV           LD+I +LT+D+VVSE ALTFNDLGIV
Sbjct: 304  YVKVPFPIAKALATPRAVLINKVPFPLPAPKIFNLDEINALTIDSVVSENALTFNDLGIV 363

Query: 430  PHKLKGYPVEYLISYRKGGPAFGSTV 353
            PHKLKGYP+E+LISYRKGGP FGST+
Sbjct: 364  PHKLKGYPIEFLISYRKGGPQFGSTI 389


>gb|ABK94679.1| unknown [Populus trichocarpa]
          Length = 399

 Score =  513 bits (1322), Expect = e-143
 Identities = 264/386 (68%), Positives = 303/386 (78%), Gaps = 1/386 (0%)
 Frame = -2

Query: 1507 RRSG-RLLDQSPAIAALKSQWPIFSSGAGCEFEQCRYGSTLSVKGTGHLVRKGTGGRSSV 1331
            RR G + L  + ++++ KS +P+     G +    R+ S+L+ KG  HL+RKGTGGRSSV
Sbjct: 6    RRLGHQSLKPAASLSSFKSIYPLSDHHYGADHP--RHASSLAAKGVCHLIRKGTGGRSSV 63

Query: 1330 SGIVSTVFGATGFLGRYVVQQLAKMGSQVLVPFRGSEDSHRHLKLMGDLGQIVPMKYNPR 1151
            SGIV+TVFGATGFLGRYVVQQLAKMGSQVLVPFRGSEDSHRHLKLMGDLGQIVPMKYNPR
Sbjct: 64   SGIVATVFGATGFLGRYVVQQLAKMGSQVLVPFRGSEDSHRHLKLMGDLGQIVPMKYNPR 123

Query: 1150 DENSIXXXXXXXXXXXNLIGREYETRNFSFEEVNHHIAEHLAVIAKEHGGIARFIQIXXX 971
            DENSI           NLIGR++ETRN+SFEE+NH + E LA+I+KEHGGI RFIQ+   
Sbjct: 124  DENSIKAVMAKANVVINLIGRDHETRNYSFEELNHGMTEQLAMISKEHGGIMRFIQVSCL 183

Query: 970  XXXXXXXXXXXXXXXXAEEAVLREFPEATVMKPATMIGTEDRILNTWAHFVKKWSFLPLV 791
                             EEAVLRE PEATVMKPA MIGTEDRILN WAHF KK+SFLPL+
Sbjct: 184  GASASSPSRMLRAKAAGEEAVLREMPEATVMKPAVMIGTEDRILNRWAHFAKKYSFLPLI 243

Query: 790  GDGSTKIQPVHVVDVAAAIMASLKDDGTSMGKTYELGGPEIFTVHQLAELMYDTIREWPR 611
            GDGSTKIQPV+VVDVAAAI+A+LKDDG+SMGK YELGGPEIFTVH+LA+LM+D IREWPR
Sbjct: 244  GDGSTKIQPVYVVDVAAAIIAALKDDGSSMGKVYELGGPEIFTVHELADLMHDVIREWPR 303

Query: 610  YVNVPVPIAKAFATPREFLLKKVXXXXXXXXXXXLDQIESLTVDTVVSEKALTFNDLGIV 431
            YV VP PIAKA ATPR  L+ KV           LD+I +LT+D+VVSE ALTFNDLGIV
Sbjct: 304  YVKVPFPIAKALATPRAVLINKVPFPLPAPKIFNLDEINALTIDSVVSENALTFNDLGIV 363

Query: 430  PHKLKGYPVEYLISYRKGGPAFGSTV 353
            PHKLKGYP+E+LISYRKGGP FGST+
Sbjct: 364  PHKLKGYPIEFLISYRKGGPQFGSTI 389


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