BLASTX nr result

ID: Dioscorea21_contig00005861 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00005861
         (1415 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299382.1| predicted protein [Populus trichocarpa] gi|2...   352   1e-94
ref|XP_002303720.1| predicted protein [Populus trichocarpa] gi|2...   347   3e-93
ref|XP_002263612.1| PREDICTED: uncharacterized protein LOC100256...   342   1e-91
emb|CAN68394.1| hypothetical protein VITISV_042519 [Vitis vinifera]   342   1e-91
ref|XP_002530111.1| DNA-3-methyladenine glycosylase, putative [R...   339   9e-91

>ref|XP_002299382.1| predicted protein [Populus trichocarpa] gi|222846640|gb|EEE84187.1|
            predicted protein [Populus trichocarpa]
          Length = 373

 Score =  352 bits (903), Expect = 1e-94
 Identities = 185/341 (54%), Positives = 232/341 (68%), Gaps = 22/341 (6%)
 Frame = -1

Query: 1328 VMDINGRPVLQPGGNRVSVL-----------VKKPVQKLIVNNNINEVMNAXXXXXXXXX 1182
            +  INGRPVLQP  N+V  L            K P Q+      I  +  A         
Sbjct: 19   IAKINGRPVLQPKSNQVPSLERRNSLKKNSPAKSPTQEPAAVPPIPLMQPAGNAAGTKTK 78

Query: 1181 XXPQLKRNNSTDVNG-----LKRFIGGVQVGFQFESCVTEMAPPGSIAAAQREQASLLQV 1017
                L    S  +       +KR      +    E   T +  PGSIAAA+RE  +++Q 
Sbjct: 79   QPSGLSPPISPKLKSPVPPAVKRGNDPDGLNTSAEKVWTPLESPGSIAAARREHVAVMQE 138

Query: 1016 QRKMKIAHYGRVSASK----VAPFDS--SHGVPQEEKRCSFITVNSDPVYVAYHDEEWGV 855
            QRKM+IAHYGR   +K    V P DS  ++ + +EEKRCSFIT NSDP+YVAYHDEEWGV
Sbjct: 139  QRKMRIAHYGRTKPAKYHGKVVPADSPATNTISREEKRCSFITPNSDPIYVAYHDEEWGV 198

Query: 854  PVHEDKMLFELLALAGAQVGSDWTTILKKRQSFREAFAGFDAEKVAMFTEKQILAISSDH 675
            PVH+DKMLFELL L GAQVGSDWT++LKKR++FREAF+GFDAE VA FTEK+I +IS+++
Sbjct: 199  PVHDDKMLFELLVLTGAQVGSDWTSVLKKREAFREAFSGFDAEVVAKFTEKKIASISAEY 258

Query: 674  RIDLAKVRGIIDNAKRILEVRKEFGSLDKYLWGFVNHKPIITNYKSCRKIPAKTSKSEAI 495
             ID ++VRG++DN+ +I+EV++EFGS DKYLW +VNHKPI T YKSC+KIP KTSKSE I
Sbjct: 259  GIDTSQVRGVVDNSNKIMEVKREFGSFDKYLWEYVNHKPIFTQYKSCQKIPVKTSKSETI 318

Query: 494  SKDLLRRGFRFVGPTIVHSFMQAAGLTNDHLVHCPRHHSLT 372
            SKD+++RGFRFVGPT++HSFMQA GL NDHL+ CPRH   T
Sbjct: 319  SKDMVKRGFRFVGPTVIHSFMQAGGLRNDHLITCPRHLQYT 359


>ref|XP_002303720.1| predicted protein [Populus trichocarpa] gi|222841152|gb|EEE78699.1|
            predicted protein [Populus trichocarpa]
          Length = 354

 Score =  347 bits (891), Expect = 3e-93
 Identities = 161/234 (68%), Positives = 204/234 (87%), Gaps = 6/234 (2%)
 Frame = -1

Query: 1067 PGSIAAAQREQASLLQVQRKMKIAHYGRVSASK----VAPFDS--SHGVPQEEKRCSFIT 906
            PGSIAAA+REQ + +Q QRKM+IAHYGR  ++K    + P +S  +  + +EEKRCSFIT
Sbjct: 95   PGSIAAARREQVAAMQEQRKMRIAHYGRTKSAKYQGKIVPANSPATSTITREEKRCSFIT 154

Query: 905  VNSDPVYVAYHDEEWGVPVHEDKMLFELLALAGAQVGSDWTTILKKRQSFREAFAGFDAE 726
             NSDPVYVAYHDEEWGVPVH+DK+LFELLAL GAQVGS+WT++LKKR++FREAF+GFDAE
Sbjct: 155  PNSDPVYVAYHDEEWGVPVHDDKLLFELLALTGAQVGSEWTSVLKKREAFREAFSGFDAE 214

Query: 725  KVAMFTEKQILAISSDHRIDLAKVRGIIDNAKRILEVRKEFGSLDKYLWGFVNHKPIITN 546
             VA FTEK+I +IS+++ +D+++VRG++DN+ RILEV++EFGS D+YLWG+VNHKPI T 
Sbjct: 215  IVAKFTEKKIASISAEYGLDISQVRGVVDNSNRILEVKREFGSFDEYLWGYVNHKPISTQ 274

Query: 545  YKSCRKIPAKTSKSEAISKDLLRRGFRFVGPTIVHSFMQAAGLTNDHLVHCPRH 384
            YKSC+KIP KTSKSE ISKD+++RGFRFVGPT++HSFMQA GL+NDHL+ CPRH
Sbjct: 275  YKSCQKIPVKTSKSETISKDMVKRGFRFVGPTVIHSFMQAGGLSNDHLITCPRH 328


>ref|XP_002263612.1| PREDICTED: uncharacterized protein LOC100256507 [Vitis vinifera]
            gi|297738175|emb|CBI27376.3| unnamed protein product
            [Vitis vinifera]
          Length = 398

 Score =  342 bits (878), Expect = 1e-91
 Identities = 190/384 (49%), Positives = 237/384 (61%), Gaps = 57/384 (14%)
 Frame = -1

Query: 1364 MCTSKIKSGHAGV------MDINGRPVLQPGGNRVSVLVKK------------------- 1260
            MC+SK K  H G+        INGRP LQP  NR+  L +                    
Sbjct: 1    MCSSKSKL-HQGIDITPSKAQINGRPALQPTCNRIPSLERHHSFKKISPKSPTSPLPASP 59

Query: 1259 -PVQKLIVNNNINEVMNAXXXXXXXXXXXPQLKRNNSTDVNGLKRFIGGVQVGF------ 1101
             P   +I        +             P LKR N  D NGL   +  V          
Sbjct: 60   PPPTTIINTTKTKPSLTPPASPNLKSPRQPALKRGN--DPNGLNSSLEKVLTPRGTTKSS 117

Query: 1100 ----QFESCVTEMAP-----------------PGSIAAAQREQASLLQVQRKMKIAHYGR 984
                + + C   +AP                 PGSIAAA+REQ +++QVQRKM+IAHYGR
Sbjct: 118  SSPKKTKKCSAGLAPSSDTSSLNYSSSLIVEAPGSIAAARREQMAIMQVQRKMRIAHYGR 177

Query: 983  VSASK----VAPFDSSHGVPQEEKRCSFITVNSDPVYVAYHDEEWGVPVHEDKMLFELLA 816
              ++K    + P D      +EEKRCSFIT NSDP YV YHDEEWGVPVH+DK LFELL 
Sbjct: 178  TKSAKYEEKIGPVDPLVITTREEKRCSFITPNSDPSYVEYHDEEWGVPVHDDKRLFELLV 237

Query: 815  LAGAQVGSDWTTILKKRQSFREAFAGFDAEKVAMFTEKQILAISSDHRIDLAKVRGIIDN 636
            + GAQVGSDWTT+LKKRQ +R+A +G+DAE V  F+EK+I +IS+ + IDL++VRG++DN
Sbjct: 238  MTGAQVGSDWTTVLKKRQEYRDALSGYDAEIVGKFSEKKITSISAYYGIDLSQVRGVVDN 297

Query: 635  AKRILEVRKEFGSLDKYLWGFVNHKPIITNYKSCRKIPAKTSKSEAISKDLLRRGFRFVG 456
            + RILE+++EFGS  KY+WGFVNHKPI T YKSC KIP KTSKSE+ISKD++RRGFR VG
Sbjct: 298  SNRILEIKREFGSFHKYIWGFVNHKPITTQYKSCHKIPVKTSKSESISKDMVRRGFRLVG 357

Query: 455  PTIVHSFMQAAGLTNDHLVHCPRH 384
            PT+++SFMQAAGLTNDHL+ CPRH
Sbjct: 358  PTVIYSFMQAAGLTNDHLISCPRH 381


>emb|CAN68394.1| hypothetical protein VITISV_042519 [Vitis vinifera]
          Length = 398

 Score =  342 bits (877), Expect = 1e-91
 Identities = 190/384 (49%), Positives = 238/384 (61%), Gaps = 57/384 (14%)
 Frame = -1

Query: 1364 MCTSKIKSGHAGV------MDINGRPVLQPGGNRVSVLVKK------------------- 1260
            MC+SK K  H G+        INGRP LQP  NR+  L +                    
Sbjct: 1    MCSSKSKL-HQGIDITPSKAQINGRPALQPTCNRIPSLERHHSFKKISPKSPTSPLPASL 59

Query: 1259 -PVQKLIVNNNINEVMNAXXXXXXXXXXXPQLKRNNSTDVNGLKRFIGGVQVGF------ 1101
             P   +I        +             P LKR N  D NGL   +  V          
Sbjct: 60   PPPTTIINTTKTKPSLTPPASPNLKSPRQPALKRGN--DPNGLNSSLEKVLTPRGTTKSS 117

Query: 1100 ----QFESCVTEMAP-----------------PGSIAAAQREQASLLQVQRKMKIAHYGR 984
                + + C   +AP                 PGSIAAA+REQ +++QVQRKM+IAHYGR
Sbjct: 118  SSPKKTKKCSAGLAPSSDTSSLNYSSSFIVEAPGSIAAARREQMAIMQVQRKMRIAHYGR 177

Query: 983  VSASK----VAPFDSSHGVPQEEKRCSFITVNSDPVYVAYHDEEWGVPVHEDKMLFELLA 816
              ++K    ++P D      +EEKRCSFIT NSDP YV YHDEEWGVPVH+DK LFELL 
Sbjct: 178  TKSAKYEEKISPVDPLVITTREEKRCSFITPNSDPSYVEYHDEEWGVPVHDDKRLFELLV 237

Query: 815  LAGAQVGSDWTTILKKRQSFREAFAGFDAEKVAMFTEKQILAISSDHRIDLAKVRGIIDN 636
            + GAQVGSDWTT+LKKRQ +R+AF+G+DAE V  F+EK+I +IS+ + IDL++VRG++DN
Sbjct: 238  MTGAQVGSDWTTVLKKRQEYRDAFSGYDAEIVGKFSEKKITSISAYYGIDLSQVRGVVDN 297

Query: 635  AKRILEVRKEFGSLDKYLWGFVNHKPIITNYKSCRKIPAKTSKSEAISKDLLRRGFRFVG 456
            + RILE+++EFGS  KY+WGFVNHKPI T  KSC KIP KTSKSE+ISKD++RRGFR VG
Sbjct: 298  SNRILEIKREFGSFHKYIWGFVNHKPITTQXKSCHKIPVKTSKSESISKDMVRRGFRLVG 357

Query: 455  PTIVHSFMQAAGLTNDHLVHCPRH 384
            PT+++SFMQAAGLTNDHL+ CPRH
Sbjct: 358  PTVIYSFMQAAGLTNDHLISCPRH 381


>ref|XP_002530111.1| DNA-3-methyladenine glycosylase, putative [Ricinus communis]
            gi|223530365|gb|EEF32255.1| DNA-3-methyladenine
            glycosylase, putative [Ricinus communis]
          Length = 403

 Score =  339 bits (870), Expect = 9e-91
 Identities = 156/238 (65%), Positives = 202/238 (84%), Gaps = 9/238 (3%)
 Frame = -1

Query: 1067 PGSIAAAQREQASLLQVQRKMKIAHYGRVSA-------SKVAPFDS--SHGVPQEEKRCS 915
            PGSIAAA+RE  + +Q QRK++ AHYGRV++       +K+ P DS  +  VPQEE+RCS
Sbjct: 159  PGSIAAARREHVATMQEQRKLRTAHYGRVNSGSKSKRDAKIVPVDSPAATAVPQEERRCS 218

Query: 914  FITVNSDPVYVAYHDEEWGVPVHEDKMLFELLALAGAQVGSDWTTILKKRQSFREAFAGF 735
            FIT +SDP+YVAYHD+EWGVPVH+DKMLFELL L GAQ+GSDWT++LKKR++FREAF+GF
Sbjct: 219  FITPSSDPIYVAYHDQEWGVPVHDDKMLFELLVLTGAQIGSDWTSVLKKREAFREAFSGF 278

Query: 734  DAEKVAMFTEKQILAISSDHRIDLAKVRGIIDNAKRILEVRKEFGSLDKYLWGFVNHKPI 555
            DAE VA F+EK+  +IS+++ +++++VRG++DN+ RIL+V+KEFGS DKYLWGFVNHKPI
Sbjct: 279  DAEIVAKFSEKKTTSISAEYGMEISQVRGVVDNSNRILQVKKEFGSFDKYLWGFVNHKPI 338

Query: 554  ITNYKSCRKIPAKTSKSEAISKDLLRRGFRFVGPTIVHSFMQAAGLTNDHLVHCPRHH 381
             T Y+S  KIP KTSKSE ISKD+++RGFR+VGPT++HSFMQAAGL+NDHL+ C RHH
Sbjct: 339  TTQYRSSNKIPVKTSKSETISKDMVKRGFRYVGPTVMHSFMQAAGLSNDHLISCSRHH 396


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