BLASTX nr result

ID: Dioscorea21_contig00005848 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00005848
         (209 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285183.1| PREDICTED: uncharacterized protein LOC100250...    85   5e-15
emb|CAN81656.1| hypothetical protein VITISV_042594 [Vitis vinifera]    85   5e-15
ref|XP_002465461.1| hypothetical protein SORBIDRAFT_01g039270 [S...    84   9e-15
gb|AFW88798.1| ATP synthase B chain [Zea mays]                         83   3e-14
gb|ACN27568.1| unknown [Zea mays]                                      83   3e-14

>ref|XP_002285183.1| PREDICTED: uncharacterized protein LOC100250997 [Vitis vinifera]
          Length = 215

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 48/67 (71%), Positives = 52/67 (77%)
 Frame = -2

Query: 202 VKDTSVEVKQLEEQAAAVMKAARAEITAALNKMKKETTAELEVKLIEGRKKVXXXXXXXX 23
           VKDTS EVKQLEEQAAAVMKA RAEI+AALN+MKKET AE+E+KL EGRKKV        
Sbjct: 124 VKDTSGEVKQLEEQAAAVMKAVRAEISAALNQMKKETAAEVEMKLAEGRKKVEAELQEAL 183

Query: 22  XXXEKQK 2
              EKQK
Sbjct: 184 AVLEKQK 190


>emb|CAN81656.1| hypothetical protein VITISV_042594 [Vitis vinifera]
          Length = 148

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 48/67 (71%), Positives = 52/67 (77%)
 Frame = -2

Query: 202 VKDTSVEVKQLEEQAAAVMKAARAEITAALNKMKKETTAELEVKLIEGRKKVXXXXXXXX 23
           VKDTS EVKQLEEQAAAVMKA RAEI+AALN+MKKET AE+E+KL EGRKKV        
Sbjct: 57  VKDTSGEVKQLEEQAAAVMKAVRAEISAALNQMKKETAAEVEMKLAEGRKKVEAELQEAL 116

Query: 22  XXXEKQK 2
              EKQK
Sbjct: 117 AVLEKQK 123


>ref|XP_002465461.1| hypothetical protein SORBIDRAFT_01g039270 [Sorghum bicolor]
           gi|241919315|gb|EER92459.1| hypothetical protein
           SORBIDRAFT_01g039270 [Sorghum bicolor]
          Length = 214

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 44/54 (81%), Positives = 48/54 (88%)
 Frame = -2

Query: 208 GEVKDTSVEVKQLEEQAAAVMKAARAEITAALNKMKKETTAELEVKLIEGRKKV 47
           G+VKD S EVKQLE+QAAA+MKAARAEI AALNKMKKETTAELE KL EGR +V
Sbjct: 120 GDVKDASEEVKQLEDQAAAIMKAARAEIAAALNKMKKETTAELEGKLEEGRSRV 173


>gb|AFW88798.1| ATP synthase B chain [Zea mays]
          Length = 216

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 43/54 (79%), Positives = 47/54 (87%)
 Frame = -2

Query: 208 GEVKDTSVEVKQLEEQAAAVMKAARAEITAALNKMKKETTAELEVKLIEGRKKV 47
           G+VK  S EVKQLE+QAAA+MKAARAEI AALNKMKKETTAELE KL EGR +V
Sbjct: 122 GDVKGASEEVKQLEDQAAAIMKAARAEIAAALNKMKKETTAELEAKLDEGRSRV 175


>gb|ACN27568.1| unknown [Zea mays]
          Length = 145

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 43/54 (79%), Positives = 47/54 (87%)
 Frame = -2

Query: 208 GEVKDTSVEVKQLEEQAAAVMKAARAEITAALNKMKKETTAELEVKLIEGRKKV 47
           G+VK  S EVKQLE+QAAA+MKAARAEI AALNKMKKETTAELE KL EGR +V
Sbjct: 51  GDVKGASEEVKQLEDQAAAIMKAARAEIAAALNKMKKETTAELEAKLDEGRSRV 104


Top