BLASTX nr result

ID: Dioscorea21_contig00005830 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00005830
         (565 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280012.1| PREDICTED: 40S ribosomal protein S13 [Vitis ...   172   3e-41
ref|NP_001234162.1| cytoplasmic ribosomal protein S13 [Solanum l...   171   6e-41
gb|ABB86273.1| cytoplasmic ribosomal protein S13-like [Solanum t...   171   6e-41
gb|AEC32112.1| cytoplasmic ribosomal protein [Camellia sinensis]      171   6e-41
ref|XP_002511695.1| 40S ribosomal protein S13, putative [Ricinus...   171   6e-41

>ref|XP_002280012.1| PREDICTED: 40S ribosomal protein S13 [Vitis vinifera]
           gi|147820740|emb|CAN69640.1| hypothetical protein
           VITISV_028568 [Vitis vinifera]
           gi|296089171|emb|CBI38874.3| unnamed protein product
           [Vitis vinifera]
          Length = 151

 Score =  172 bits (437), Expect = 3e-41
 Identities = 85/85 (100%), Positives = 85/85 (100%)
 Frame = +2

Query: 2   HGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLIL 181
           HGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLIL
Sbjct: 58  HGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLIL 117

Query: 182 VESRIHRLARYYKRTKKLPPVWKYE 256
           VESRIHRLARYYKRTKKLPPVWKYE
Sbjct: 118 VESRIHRLARYYKRTKKLPPVWKYE 142


>ref|NP_001234162.1| cytoplasmic ribosomal protein S13 [Solanum lycopersicum]
           gi|68449762|gb|AAY97868.1| cytoplasmic ribosomal protein
           S13 [Solanum lycopersicum]
          Length = 151

 Score =  171 bits (434), Expect = 6e-41
 Identities = 84/85 (98%), Positives = 85/85 (100%)
 Frame = +2

Query: 2   HGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLIL 181
           HGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLIL
Sbjct: 58  HGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLIL 117

Query: 182 VESRIHRLARYYKRTKKLPPVWKYE 256
           VESRIHRLARYYK+TKKLPPVWKYE
Sbjct: 118 VESRIHRLARYYKKTKKLPPVWKYE 142


>gb|ABB86273.1| cytoplasmic ribosomal protein S13-like [Solanum tuberosum]
          Length = 151

 Score =  171 bits (434), Expect = 6e-41
 Identities = 84/85 (98%), Positives = 85/85 (100%)
 Frame = +2

Query: 2   HGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLIL 181
           HGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLIL
Sbjct: 58  HGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLIL 117

Query: 182 VESRIHRLARYYKRTKKLPPVWKYE 256
           VESRIHRLARYYK+TKKLPPVWKYE
Sbjct: 118 VESRIHRLARYYKKTKKLPPVWKYE 142


>gb|AEC32112.1| cytoplasmic ribosomal protein [Camellia sinensis]
          Length = 151

 Score =  171 bits (434), Expect = 6e-41
 Identities = 84/85 (98%), Positives = 85/85 (100%)
 Frame = +2

Query: 2   HGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLIL 181
           HGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLIL
Sbjct: 58  HGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLIL 117

Query: 182 VESRIHRLARYYKRTKKLPPVWKYE 256
           VESRIHRLARYYK+TKKLPPVWKYE
Sbjct: 118 VESRIHRLARYYKKTKKLPPVWKYE 142


>ref|XP_002511695.1| 40S ribosomal protein S13, putative [Ricinus communis]
           gi|223548875|gb|EEF50364.1| 40S ribosomal protein S13,
           putative [Ricinus communis]
          Length = 151

 Score =  171 bits (434), Expect = 6e-41
 Identities = 84/85 (98%), Positives = 85/85 (100%)
 Frame = +2

Query: 2   HGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLIL 181
           HGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLIL
Sbjct: 58  HGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLIL 117

Query: 182 VESRIHRLARYYKRTKKLPPVWKYE 256
           VESRIHRLARYYK+TKKLPPVWKYE
Sbjct: 118 VESRIHRLARYYKKTKKLPPVWKYE 142


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