BLASTX nr result

ID: Dioscorea21_contig00005809 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00005809
         (1087 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004142648.1| PREDICTED: tubulin-specific chaperone B-like...   363   3e-98
ref|XP_002274343.1| PREDICTED: tubulin-specific chaperone B isof...   363   5e-98
ref|XP_002529160.1| tubulin-specific chaperone B, putative [Rici...   362   1e-97
ref|XP_002274425.1| PREDICTED: tubulin-specific chaperone B isof...   355   1e-95
ref|XP_002307984.1| tubulin folding cofactor [Populus trichocarp...   353   4e-95

>ref|XP_004142648.1| PREDICTED: tubulin-specific chaperone B-like [Cucumis sativus]
          Length = 245

 Score =  363 bits (933), Expect = 3e-98
 Identities = 172/230 (74%), Positives = 205/230 (89%), Gaps = 1/230 (0%)
 Frame = -3

Query: 965 MASALQ-LPVDDSVLFQVTHANIKSFSTELRLSLQTTIESVKEKLWRKCGTSVASMLLQL 789
           MAS LQ +  D+SVL +VTHAN+KSF++++R SLQ ++ESVKEKLWRKCGTSV SM L+L
Sbjct: 1   MASRLQQIEKDESVLLRVTHANLKSFTSDVRFSLQMSVESVKEKLWRKCGTSVNSMCLEL 60

Query: 788 FDDSGSKICDLTDDSRPLGFFSPHDGYRLHIVDLDPSSVTSGGWLEDTSLVEKYTISEEA 609
           +DDSGSKI DLTD+  PLGF+SP DGYRLHI+DLDPSSVTSGGWLEDTSLVEK+ ISEEA
Sbjct: 61  YDDSGSKISDLTDNCIPLGFYSPLDGYRLHIIDLDPSSVTSGGWLEDTSLVEKFQISEEA 120

Query: 608 YDKLNNNFRKFKEKMASQHATGTQNKLSDNYMEDLCANIKVGDRCQIEPGEKRGVVKFVG 429
           YDK ++ FRKFKEK+ASQ+ +  ++K+SDNYME+LCANIKVGDRCQ+EPGEKRGVVKFVG
Sbjct: 121 YDKRDDTFRKFKEKLASQNPSAFESKISDNYMEELCANIKVGDRCQVEPGEKRGVVKFVG 180

Query: 428 KAETAGPGYWVGIQYDEPLGKHDGTVKGKRYFDCPPQHGALLRPDKVKVG 279
           +AE+  PG+WVG+QYDEPLGK+DGTVKG  YFDC P HGA++RPDKVKVG
Sbjct: 181 RAESLAPGFWVGVQYDEPLGKNDGTVKGIHYFDCSPFHGAMVRPDKVKVG 230


>ref|XP_002274343.1| PREDICTED: tubulin-specific chaperone B isoform 1 [Vitis vinifera]
           gi|359482231|ref|XP_003632738.1| PREDICTED:
           tubulin-specific chaperone B [Vitis vinifera]
           gi|297739921|emb|CBI30103.3| unnamed protein product
           [Vitis vinifera]
          Length = 242

 Score =  363 bits (931), Expect = 5e-98
 Identities = 167/229 (72%), Positives = 202/229 (88%)
 Frame = -3

Query: 965 MASALQLPVDDSVLFQVTHANIKSFSTELRLSLQTTIESVKEKLWRKCGTSVASMLLQLF 786
           MAS LQ+  D+SV  +VTH NIKSFS ++R SLQ T+ESVK+KLWRKCGTSV SM L+L+
Sbjct: 1   MASRLQIQEDESVSLRVTHGNIKSFSADVRFSLQMTVESVKDKLWRKCGTSVNSMCLELY 60

Query: 785 DDSGSKICDLTDDSRPLGFFSPHDGYRLHIVDLDPSSVTSGGWLEDTSLVEKYTISEEAY 606
           DD+G+KI  L+D+ RPLGF+SP DGYRLH++DLDPSSVTSGGWLEDTSLVEKY+ISEEAY
Sbjct: 61  DDTGAKISVLSDNLRPLGFYSPQDGYRLHVIDLDPSSVTSGGWLEDTSLVEKYSISEEAY 120

Query: 605 DKLNNNFRKFKEKMASQHATGTQNKLSDNYMEDLCANIKVGDRCQIEPGEKRGVVKFVGK 426
           +KL+  FRKFKEK+A Q+ +  ++K+SD+YM DLCANIKVGDRC++EPGEKRGVVKFVG+
Sbjct: 121 EKLDGTFRKFKEKLAFQNPSILESKISDHYMGDLCANIKVGDRCEVEPGEKRGVVKFVGR 180

Query: 425 AETAGPGYWVGIQYDEPLGKHDGTVKGKRYFDCPPQHGALLRPDKVKVG 279
           A++  PG+WVG+QYDEPLGKHDG VKG RYFDCPP HGA++RPDKVKVG
Sbjct: 181 AQSLAPGFWVGVQYDEPLGKHDGMVKGTRYFDCPPLHGAMVRPDKVKVG 229


>ref|XP_002529160.1| tubulin-specific chaperone B, putative [Ricinus communis]
           gi|223531384|gb|EEF33219.1| tubulin-specific chaperone
           B, putative [Ricinus communis]
          Length = 243

 Score =  362 bits (928), Expect = 1e-97
 Identities = 162/230 (70%), Positives = 202/230 (87%), Gaps = 1/230 (0%)
 Frame = -3

Query: 965 MASALQ-LPVDDSVLFQVTHANIKSFSTELRLSLQTTIESVKEKLWRKCGTSVASMLLQL 789
           M S LQ +  D+SV+ ++TH+N+K+FS ++R SL++T+ESVKEKLWRKCGTSV SM LQL
Sbjct: 1   MGSKLQKIEGDESVVLRITHSNLKTFSADVRFSLESTVESVKEKLWRKCGTSVNSMTLQL 60

Query: 788 FDDSGSKICDLTDDSRPLGFFSPHDGYRLHIVDLDPSSVTSGGWLEDTSLVEKYTISEEA 609
           +DD+ SKICDL+DDSRPLGF+SP DGYR+H++D+DPSSVTSGGWLEDTSLVEKYTISEEA
Sbjct: 61  YDDTNSKICDLSDDSRPLGFYSPLDGYRIHVIDVDPSSVTSGGWLEDTSLVEKYTISEEA 120

Query: 608 YDKLNNNFRKFKEKMASQHATGTQNKLSDNYMEDLCANIKVGDRCQIEPGEKRGVVKFVG 429
           Y+K    FRKFKEK+ SQ+ +  + K+++NYMEDLCANIK+GDRC++EPG KRG+VKFVG
Sbjct: 121 YEKRGGTFRKFKEKLVSQNPSAFEPKITENYMEDLCANIKLGDRCEVEPGAKRGIVKFVG 180

Query: 428 KAETAGPGYWVGIQYDEPLGKHDGTVKGKRYFDCPPQHGALLRPDKVKVG 279
           +AE+  PG+WVG+QYDEPLGKHDG VKG RYFDCPP HG ++RPDK+KVG
Sbjct: 181 RAESLAPGFWVGVQYDEPLGKHDGLVKGVRYFDCPPLHGGMIRPDKIKVG 230


>ref|XP_002274425.1| PREDICTED: tubulin-specific chaperone B isoform 2 [Vitis vinifera]
          Length = 243

 Score =  355 bits (911), Expect = 1e-95
 Identities = 166/230 (72%), Positives = 201/230 (87%), Gaps = 1/230 (0%)
 Frame = -3

Query: 965 MASALQLPVDDSVLFQVTHANIKSFSTELRLSLQTTIESVKEKLWRKCGTSVASMLLQLF 786
           MAS LQ+  D+SV  +VTH NIKSFS ++R SLQ T+ESVK+KLWRKCGTSV SM L+L+
Sbjct: 1   MASRLQIQEDESVSLRVTHGNIKSFSADVRFSLQMTVESVKDKLWRKCGTSVNSMCLELY 60

Query: 785 DDSGSKICDLTDDSRPLGFFSPHDGYRLHIVDLDPSSVTSGGWLEDTSLVEKYTISEEAY 606
           DD+G+KI  L+D+ RPLGF+SP DGYRLH++DLDPSSVTSGGWLEDTSLVEKY+ISEEAY
Sbjct: 61  DDTGAKISVLSDNLRPLGFYSPQDGYRLHVIDLDPSSVTSGGWLEDTSLVEKYSISEEAY 120

Query: 605 DKLNNNFRKFKEKMASQH-ATGTQNKLSDNYMEDLCANIKVGDRCQIEPGEKRGVVKFVG 429
           +KL+  FRKFKEK+A Q+ ++    ++SD+YM DLCANIKVGDRC++EPGEKRGVVKFVG
Sbjct: 121 EKLDGTFRKFKEKLAFQNPSSDLCLQISDHYMGDLCANIKVGDRCEVEPGEKRGVVKFVG 180

Query: 428 KAETAGPGYWVGIQYDEPLGKHDGTVKGKRYFDCPPQHGALLRPDKVKVG 279
           +A++  PG+WVG+QYDEPLGKHDG VKG RYFDCPP HGA++RPDKVKVG
Sbjct: 181 RAQSLAPGFWVGVQYDEPLGKHDGMVKGTRYFDCPPLHGAMVRPDKVKVG 230


>ref|XP_002307984.1| tubulin folding cofactor [Populus trichocarpa]
           gi|118483420|gb|ABK93610.1| unknown [Populus
           trichocarpa] gi|222853960|gb|EEE91507.1| tubulin folding
           cofactor [Populus trichocarpa]
          Length = 243

 Score =  353 bits (906), Expect = 4e-95
 Identities = 161/228 (70%), Positives = 199/228 (87%)
 Frame = -3

Query: 962 ASALQLPVDDSVLFQVTHANIKSFSTELRLSLQTTIESVKEKLWRKCGTSVASMLLQLFD 783
           +S  Q+  D++VL +VTH+NIKSFS E+R SLQ+++E+VK+KLWRKCGTSV SM L+L+D
Sbjct: 3   SSRFQIQPDEAVLLRVTHSNIKSFSAEIRFSLQSSVEAVKDKLWRKCGTSVNSMQLELYD 62

Query: 782 DSGSKICDLTDDSRPLGFFSPHDGYRLHIVDLDPSSVTSGGWLEDTSLVEKYTISEEAYD 603
           D+ SK+ +LTDDSRPLGF+SP DGYRLHI+DLDPSSVT+GGWLED S VEKY+ISEEAYD
Sbjct: 63  DANSKVSNLTDDSRPLGFYSPFDGYRLHIIDLDPSSVTAGGWLEDISSVEKYSISEEAYD 122

Query: 602 KLNNNFRKFKEKMASQHATGTQNKLSDNYMEDLCANIKVGDRCQIEPGEKRGVVKFVGKA 423
           K +  FRKFKEKMA+Q+ +    K++D+YMEDLCANIKVGDRC+I+PGEKRGVVK+VG+A
Sbjct: 123 KRDGTFRKFKEKMAAQNPSAFAPKITDDYMEDLCANIKVGDRCEIDPGEKRGVVKYVGRA 182

Query: 422 ETAGPGYWVGIQYDEPLGKHDGTVKGKRYFDCPPQHGALLRPDKVKVG 279
           E+  PG+WVG+Q+DEP GKHDG VKG RYFD PP HGA++RPDKVKVG
Sbjct: 183 ESLAPGFWVGVQFDEPFGKHDGMVKGVRYFDSPPLHGAMIRPDKVKVG 230


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