BLASTX nr result
ID: Dioscorea21_contig00005801
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00005801
(2179 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002278934.2| PREDICTED: zinc finger CCCH domain-containin... 630 e-178
ref|XP_002512627.1| nucleic acid binding protein, putative [Rici... 617 e-174
ref|XP_003534518.1| PREDICTED: zinc finger CCCH domain-containin... 613 e-173
ref|XP_003534517.1| PREDICTED: zinc finger CCCH domain-containin... 613 e-173
ref|XP_002328972.1| predicted protein [Populus trichocarpa] gi|2... 610 e-172
>ref|XP_002278934.2| PREDICTED: zinc finger CCCH domain-containing protein ZFN-like
isoform 1 [Vitis vinifera]
Length = 441
Score = 630 bits (1625), Expect = e-178
Identities = 297/393 (75%), Positives = 335/393 (85%), Gaps = 6/393 (1%)
Frame = +1
Query: 1 EPDCAYYIRTGLCRFGMTCRFNHPPNRKLAVAAARIKGGYPERVGQPECQYYLKTGTCKF 180
EPDC+YYIRTGLCRFG+TCRFNHPPNRKLA+A AR+KG +PER+GQPECQYYLKTGTCKF
Sbjct: 51 EPDCSYYIRTGLCRFGITCRFNHPPNRKLAIATARMKGEFPERMGQPECQYYLKTGTCKF 110
Query: 181 GATCKFHHPKDKAGIAGKVQLNILGYPLRLNEKECAYYLRTGQCKFGNTCKFHHPQPSNS 360
GATCKFHHP+DKAGIAG+V LNILGYPLR +E +CAYYLRTGQCKFG+TCKFHHPQPS+
Sbjct: 111 GATCKFHHPRDKAGIAGRVSLNILGYPLRPDEIDCAYYLRTGQCKFGSTCKFHHPQPSSM 170
Query: 361 MLSLRGSPGYPSVHSPTTPGQQSYPGAITNWPISRASFIPSPRWQGPSSYAQLILPQGLV 540
M+SLRGSP YPSV SPTTPGQQSY G ITNWP+SRASFIPSPRWQ PSSYA L+LPQG+V
Sbjct: 171 MVSLRGSPVYPSVPSPTTPGQQSYAGGITNWPLSRASFIPSPRWQAPSSYAPLMLPQGVV 230
Query: 541 QVPGWNAYPGQLGSVXXXXXXXXXXXXXXYYGISRQNE--TNGTQGTYPYHRSGSIPMGL 714
VPGWNAY GQLGS YG SRQ+E G+QGT+ +RSGS+P+G
Sbjct: 231 SVPGWNAYSGQLGS--PSESQQQTGGNNQIYGTSRQSEQPNTGSQGTFSPYRSGSVPIGF 288
Query: 715 YALQREHVFPERPDQPECQFYMKTGDCKFGAVCKFHHPRERLIPAPNCLLSPMGLPLRPG 894
YALQRE+VFPERP QPECQFYMKTGDCKFGAVC+FHHPRERLIP P+C+LSP+GLPLRPG
Sbjct: 289 YALQRENVFPERPGQPECQFYMKTGDCKFGAVCRFHHPRERLIPTPDCVLSPIGLPLRPG 348
Query: 895 EPLCIFYSRYGICKFGPNCKFDHPM---MYS-PAAPTADVPVVRRLLGSSTGSPALTLTS 1062
EPLCIFYSRYGICKFGP+CKFDHPM Y+ A+ +AD PVVRRLLGSS+GS ALTL+S
Sbjct: 349 EPLCIFYSRYGICKFGPSCKFDHPMGIFAYNLSASSSADAPVVRRLLGSSSGSAALTLSS 408
Query: 1063 EGPVEAGPGKSRRLSLSESRQMASGEENTEAEG 1161
+G VEAG K RRLSL E+RQM G++N + EG
Sbjct: 409 DGLVEAGSTKPRRLSLPETRQMPPGDDNIDTEG 441
Score = 82.4 bits (202), Expect = 5e-13
Identities = 33/76 (43%), Positives = 47/76 (61%)
Frame = +1
Query: 739 FPERPDQPECQFYMKTGDCKFGAVCKFHHPRERLIPAPNCLLSPMGLPLRPGEPLCIFYS 918
+PERP +P+C +Y++TG C+FG C+F+HP R + + P R G+P C +Y
Sbjct: 45 YPERPGEPDCSYYIRTGLCRFGITCRFNHPPNRKLAIATARMKG-EFPERMGQPECQYYL 103
Query: 919 RYGICKFGPNCKFDHP 966
+ G CKFG CKF HP
Sbjct: 104 KTGTCKFGATCKFHHP 119
>ref|XP_002512627.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223548588|gb|EEF50079.1| nucleic acid binding protein,
putative [Ricinus communis]
Length = 448
Score = 617 bits (1590), Expect = e-174
Identities = 293/392 (74%), Positives = 330/392 (84%), Gaps = 5/392 (1%)
Frame = +1
Query: 1 EPDCAYYIRTGLCRFGMTCRFNHPPNRKLAVAAARIKGGYPERVGQPECQYYLKTGTCKF 180
EPDC+YYIRTGLCRFG TCRFNHPPNRKLA+AAAR+KG +PER+GQPECQYYLKTGTCKF
Sbjct: 60 EPDCSYYIRTGLCRFGATCRFNHPPNRKLAIAAARMKGEFPERIGQPECQYYLKTGTCKF 119
Query: 181 GATCKFHHPKDKAGIAGKVQLNILGYPLRLNEKECAYYLRTGQCKFGNTCKFHHPQPSNS 360
GATCKFHHPKDKAGIAG+V LNILGYPLR NE ECAYYLRTGQCKFG+TCKFHHPQP+N
Sbjct: 120 GATCKFHHPKDKAGIAGRVSLNILGYPLRPNEIECAYYLRTGQCKFGSTCKFHHPQPTNV 179
Query: 361 MLSLRGSPGYPSVHSPTTPGQQSYPGAITNWPISRASFIPSPRWQGPSSYAQLILPQGLV 540
M+ LRGSP YP+V SPTTPGQQSY G +TNW SRASFI SPRWQ PSSY LILPQG+V
Sbjct: 180 MVPLRGSPVYPTVQSPTTPGQQSYTGGVTNW--SRASFITSPRWQAPSSYTPLILPQGVV 237
Query: 541 QVPGWNAYPGQLGSVXXXXXXXXXXXXXXYYGISRQNET--NGTQGTYPYHRSGSIPMGL 714
VPGWNAY GQLGSV YG SRQ+E+ G+QGT R+GS+P+G
Sbjct: 238 SVPGWNAYSGQLGSV-SSPEGQQQTGNSQIYGTSRQSESVNTGSQGTLSPLRAGSMPVGF 296
Query: 715 YALQREHVFPERPDQPECQFYMKTGDCKFGAVCKFHHPRERLIPAPNCLLSPMGLPLRPG 894
YALQR++VFPERP QPECQFYMKTGDCKFGAVC+FHHPRERLIPAP+C+LSP+GLPLRPG
Sbjct: 297 YALQRDNVFPERPGQPECQFYMKTGDCKFGAVCRFHHPRERLIPAPDCVLSPIGLPLRPG 356
Query: 895 EPLCIFYSRYGICKFGPNCKFDHPM---MYSPAAPTADVPVVRRLLGSSTGSPALTLTSE 1065
EPLCIFYSRYG+CKFGP+CKFDHPM Y+ +AP++ VRRLLGSS+GS ALTL++E
Sbjct: 357 EPLCIFYSRYGVCKFGPSCKFDHPMGIFTYNLSAPSSADAPVRRLLGSSSGSAALTLSTE 416
Query: 1066 GPVEAGPGKSRRLSLSESRQMASGEENTEAEG 1161
G V+AG K RRLSLSE RQM SG++N + EG
Sbjct: 417 GLVDAGSTKPRRLSLSEPRQMPSGDDNIDTEG 448
Score = 81.3 bits (199), Expect = 1e-12
Identities = 33/76 (43%), Positives = 47/76 (61%)
Frame = +1
Query: 739 FPERPDQPECQFYMKTGDCKFGAVCKFHHPRERLIPAPNCLLSPMGLPLRPGEPLCIFYS 918
+PE P +P+C +Y++TG C+FGA C+F+HP R + + P R G+P C +Y
Sbjct: 54 YPEHPGEPDCSYYIRTGLCRFGATCRFNHPPNRKLAIAAARMKG-EFPERIGQPECQYYL 112
Query: 919 RYGICKFGPNCKFDHP 966
+ G CKFG CKF HP
Sbjct: 113 KTGTCKFGATCKFHHP 128
>ref|XP_003534518.1| PREDICTED: zinc finger CCCH domain-containing protein ZFN-like
isoform 2 [Glycine max]
Length = 426
Score = 613 bits (1581), Expect = e-173
Identities = 287/393 (73%), Positives = 332/393 (84%), Gaps = 6/393 (1%)
Frame = +1
Query: 1 EPDCAYYIRTGLCRFGMTCRFNHPPNRKLAVAAARIKGGYPERVGQPECQYYLKTGTCKF 180
EPDC+YYIRTGLCRFG TCRFNHPPNRKLA+AAAR+KG +PER+GQPECQYYLKTGTCKF
Sbjct: 41 EPDCSYYIRTGLCRFGATCRFNHPPNRKLAIAAARMKGEFPERIGQPECQYYLKTGTCKF 100
Query: 181 GATCKFHHPKDKAGIAGKVQLNILGYPLRLNEKECAYYLRTGQCKFGNTCKFHHPQPSNS 360
GATC+FHHP+DKAGIAG+V +NILGYPLR NE ECAYYLRTGQCKFGNTCKFHHPQP+N
Sbjct: 101 GATCRFHHPRDKAGIAGRVAMNILGYPLRPNEPECAYYLRTGQCKFGNTCKFHHPQPNNM 160
Query: 361 MLSLRGSPGYPSVHSPTTPGQQSYPGAITNWPISRASFIPSPRWQGPSSYAQLILPQGLV 540
+LS+R SP YP+VHSPTTPGQQSY ITNW S +S+IPSPRWQGPSSYA LILPQG+V
Sbjct: 161 VLSMRSSPVYPTVHSPTTPGQQSYATGITNW--SSSSYIPSPRWQGPSSYAPLILPQGMV 218
Query: 541 QVPGWNAYPGQLGSVXXXXXXXXXXXXXXYYGISRQNE--TNGTQGTYPYHRSGSIPMGL 714
VPGW+AY GQ+GS YG SRQ+E +G+QG Y RSGS+P+G
Sbjct: 219 SVPGWSAYSGQMGS----DSPQQTMGNGQSYGTSRQSEPANSGSQGAYSQFRSGSVPVGF 274
Query: 715 YALQREHVFPERPDQPECQFYMKTGDCKFGAVCKFHHPRERLIPAPNCLLSPMGLPLRPG 894
YALQRE++FPERPDQPECQFYMKTGDCKFGAVC+FHHPRER+IPAP+C+LSP+GLPLRPG
Sbjct: 275 YALQRENIFPERPDQPECQFYMKTGDCKFGAVCRFHHPRERMIPAPDCVLSPIGLPLRPG 334
Query: 895 EPLCIFYSRYGICKFGPNCKFDHPM---MYS-PAAPTADVPVVRRLLGSSTGSPALTLTS 1062
EPLC+FYSRYGICKFGP+CKFDHPM Y+ A+P+AD P RR+LGSS+G+ AL L+S
Sbjct: 335 EPLCVFYSRYGICKFGPSCKFDHPMGVFTYNISASPSADAP-GRRMLGSSSGTSALNLSS 393
Query: 1063 EGPVEAGPGKSRRLSLSESRQMASGEENTEAEG 1161
EG VE+G RRLSLSE+RQ+ SG++N + EG
Sbjct: 394 EGLVESGSANPRRLSLSETRQIPSGDDNIDEEG 426
Score = 82.8 bits (203), Expect = 3e-13
Identities = 54/185 (29%), Positives = 72/185 (38%), Gaps = 53/185 (28%)
Frame = +1
Query: 739 FPERPDQPECQFYMKTGDCKFGAV------------------------------------ 810
+PE P +P+C +Y++TG C+FGA
Sbjct: 35 YPEHPGEPDCSYYIRTGLCRFGATCRFNHPPNRKLAIAAARMKGEFPERIGQPECQYYLK 94
Query: 811 ---------CKFHHPRERLIPAPNCLLSPMGLPLRPGEPLCIFYSRYGICKFGPNCKFDH 963
C+FHHPR++ A ++ +G PLRP EP C +Y R G CKFG CKF H
Sbjct: 95 TGTCKFGATCRFHHPRDKAGIAGRVAMNILGYPLRPNEPECAYYLRTGQCKFGNTCKFHH 154
Query: 964 P--------MMYSPAAPTADVPVVRRLLGSSTGSPALTLTSEGPVEAGPGKSRRLSLSES 1119
P M SP PT P +TG + +S P G S L
Sbjct: 155 PQPNNMVLSMRSSPVYPTVHSPTTPGQQSYATGITNWSSSSYIPSPRWQGPSSYAPLILP 214
Query: 1120 RQMAS 1134
+ M S
Sbjct: 215 QGMVS 219
>ref|XP_003534517.1| PREDICTED: zinc finger CCCH domain-containing protein ZFN-like
isoform 1 [Glycine max]
Length = 428
Score = 613 bits (1581), Expect = e-173
Identities = 287/393 (73%), Positives = 332/393 (84%), Gaps = 6/393 (1%)
Frame = +1
Query: 1 EPDCAYYIRTGLCRFGMTCRFNHPPNRKLAVAAARIKGGYPERVGQPECQYYLKTGTCKF 180
EPDC+YYIRTGLCRFG TCRFNHPPNRKLA+AAAR+KG +PER+GQPECQYYLKTGTCKF
Sbjct: 43 EPDCSYYIRTGLCRFGATCRFNHPPNRKLAIAAARMKGEFPERIGQPECQYYLKTGTCKF 102
Query: 181 GATCKFHHPKDKAGIAGKVQLNILGYPLRLNEKECAYYLRTGQCKFGNTCKFHHPQPSNS 360
GATC+FHHP+DKAGIAG+V +NILGYPLR NE ECAYYLRTGQCKFGNTCKFHHPQP+N
Sbjct: 103 GATCRFHHPRDKAGIAGRVAMNILGYPLRPNEPECAYYLRTGQCKFGNTCKFHHPQPNNM 162
Query: 361 MLSLRGSPGYPSVHSPTTPGQQSYPGAITNWPISRASFIPSPRWQGPSSYAQLILPQGLV 540
+LS+R SP YP+VHSPTTPGQQSY ITNW S +S+IPSPRWQGPSSYA LILPQG+V
Sbjct: 163 VLSMRSSPVYPTVHSPTTPGQQSYATGITNW--SSSSYIPSPRWQGPSSYAPLILPQGMV 220
Query: 541 QVPGWNAYPGQLGSVXXXXXXXXXXXXXXYYGISRQNE--TNGTQGTYPYHRSGSIPMGL 714
VPGW+AY GQ+GS YG SRQ+E +G+QG Y RSGS+P+G
Sbjct: 221 SVPGWSAYSGQMGS----DSPQQTMGNGQSYGTSRQSEPANSGSQGAYSQFRSGSVPVGF 276
Query: 715 YALQREHVFPERPDQPECQFYMKTGDCKFGAVCKFHHPRERLIPAPNCLLSPMGLPLRPG 894
YALQRE++FPERPDQPECQFYMKTGDCKFGAVC+FHHPRER+IPAP+C+LSP+GLPLRPG
Sbjct: 277 YALQRENIFPERPDQPECQFYMKTGDCKFGAVCRFHHPRERMIPAPDCVLSPIGLPLRPG 336
Query: 895 EPLCIFYSRYGICKFGPNCKFDHPM---MYS-PAAPTADVPVVRRLLGSSTGSPALTLTS 1062
EPLC+FYSRYGICKFGP+CKFDHPM Y+ A+P+AD P RR+LGSS+G+ AL L+S
Sbjct: 337 EPLCVFYSRYGICKFGPSCKFDHPMGVFTYNISASPSADAP-GRRMLGSSSGTSALNLSS 395
Query: 1063 EGPVEAGPGKSRRLSLSESRQMASGEENTEAEG 1161
EG VE+G RRLSLSE+RQ+ SG++N + EG
Sbjct: 396 EGLVESGSANPRRLSLSETRQIPSGDDNIDEEG 428
Score = 82.8 bits (203), Expect = 3e-13
Identities = 54/185 (29%), Positives = 72/185 (38%), Gaps = 53/185 (28%)
Frame = +1
Query: 739 FPERPDQPECQFYMKTGDCKFGAV------------------------------------ 810
+PE P +P+C +Y++TG C+FGA
Sbjct: 37 YPEHPGEPDCSYYIRTGLCRFGATCRFNHPPNRKLAIAAARMKGEFPERIGQPECQYYLK 96
Query: 811 ---------CKFHHPRERLIPAPNCLLSPMGLPLRPGEPLCIFYSRYGICKFGPNCKFDH 963
C+FHHPR++ A ++ +G PLRP EP C +Y R G CKFG CKF H
Sbjct: 97 TGTCKFGATCRFHHPRDKAGIAGRVAMNILGYPLRPNEPECAYYLRTGQCKFGNTCKFHH 156
Query: 964 P--------MMYSPAAPTADVPVVRRLLGSSTGSPALTLTSEGPVEAGPGKSRRLSLSES 1119
P M SP PT P +TG + +S P G S L
Sbjct: 157 PQPNNMVLSMRSSPVYPTVHSPTTPGQQSYATGITNWSSSSYIPSPRWQGPSSYAPLILP 216
Query: 1120 RQMAS 1134
+ M S
Sbjct: 217 QGMVS 221
>ref|XP_002328972.1| predicted protein [Populus trichocarpa] gi|222839206|gb|EEE77557.1|
predicted protein [Populus trichocarpa]
Length = 425
Score = 610 bits (1574), Expect = e-172
Identities = 295/394 (74%), Positives = 329/394 (83%), Gaps = 7/394 (1%)
Frame = +1
Query: 1 EPDCAYYIRTGLCRFGMTCRFNHPPNRKLAVAAARIKGGYPERVGQPECQYYLKTGTCKF 180
EPDC+YYIRTGLCRFG TCRFNHPPNRKLA+AAAR+KG +PER+GQPECQYYLKTGTCKF
Sbjct: 36 EPDCSYYIRTGLCRFGATCRFNHPPNRKLAIAAARMKGEFPERIGQPECQYYLKTGTCKF 95
Query: 181 GATCKFHHPKDKAGIAGKVQLNILGYPLRLNEKECAYYLRTGQCKFGNTCKFHHPQPSNS 360
GATCKFHHP+DKAGI+G+V LNILGYPL+ NE ECAYYLRTGQCKFG+TCKFHHPQP+N
Sbjct: 96 GATCKFHHPRDKAGISGRVSLNILGYPLQPNEIECAYYLRTGQCKFGSTCKFHHPQPTNM 155
Query: 361 MLSLRGSPGYPSVHSPTTPGQQSYPGAI-TNWPISRASFIPSPRWQGPSSYAQLILPQGL 537
M+ LRGSP YP+V SPTTPGQQSYPG + T W SRASFI SPRWQ PSSY LILPQG+
Sbjct: 156 MVPLRGSPIYPTVSSPTTPGQQSYPGGLATTW--SRASFITSPRWQAPSSYTPLILPQGV 213
Query: 538 VQVPGWNAYPGQLGSVXXXXXXXXXXXXXXYYGISRQNET--NGTQGTYPYHRSGSIPMG 711
V VPGWNAY GQLGSV YG SR +E+ G+QGT+ +RSGS P+G
Sbjct: 214 VSVPGWNAYSGQLGSV-SSPESQQQTGNSQIYGTSRHSESVNAGSQGTFSPYRSGSAPLG 272
Query: 712 LYALQREHVFPERPDQPECQFYMKTGDCKFGAVCKFHHPRERLIPAPNCLLSPMGLPLRP 891
YALQRE VFPERP QPECQFYMKTGDCKFGAVC+FHHPRERLIPAP+C+LSP+GLPLRP
Sbjct: 273 FYALQRESVFPERPGQPECQFYMKTGDCKFGAVCRFHHPRERLIPAPDCVLSPIGLPLRP 332
Query: 892 GEPLCIFYSRYGICKFGPNCKFDHPM---MYS-PAAPTADVPVVRRLLGSSTGSPALTLT 1059
GEPLCIFYSRYGICKFGP+CKFDHPM Y+ A+ +AD P VRRLLGSS+GSP LTL+
Sbjct: 333 GEPLCIFYSRYGICKFGPSCKFDHPMGVFTYNLTASSSADAP-VRRLLGSSSGSPGLTLS 391
Query: 1060 SEGPVEAGPGKSRRLSLSESRQMASGEENTEAEG 1161
SEG VEAGP K RRLSLSE RQM G++N + G
Sbjct: 392 SEGLVEAGPTKPRRLSLSEPRQMPPGDDNIDTGG 425
Score = 83.2 bits (204), Expect = 3e-13
Identities = 34/76 (44%), Positives = 48/76 (63%)
Frame = +1
Query: 739 FPERPDQPECQFYMKTGDCKFGAVCKFHHPRERLIPAPNCLLSPMGLPLRPGEPLCIFYS 918
+PERP +P+C +Y++TG C+FGA C+F+HP R + + P R G+P C +Y
Sbjct: 30 YPERPGEPDCSYYIRTGLCRFGATCRFNHPPNRKLAIAAARMKG-EFPERIGQPECQYYL 88
Query: 919 RYGICKFGPNCKFDHP 966
+ G CKFG CKF HP
Sbjct: 89 KTGTCKFGATCKFHHP 104