BLASTX nr result

ID: Dioscorea21_contig00005782 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00005782
         (968 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001147741.1| ligatin [Zea mays] gi|195613408|gb|ACG28534....   260   4e-67
ref|XP_002457755.1| hypothetical protein SORBIDRAFT_03g012920 [S...   258   2e-66
ref|NP_001042871.1| Os01g0314300 [Oryza sativa Japonica Group] g...   255   1e-65
emb|CBI39540.3| unnamed protein product [Vitis vinifera]              253   4e-65
emb|CBI83390.1| MCT-1 like PUA RNA binding-domain containing pro...   252   8e-65

>ref|NP_001147741.1| ligatin [Zea mays] gi|195613408|gb|ACG28534.1| ligatin [Zea mays]
           gi|223945305|gb|ACN26736.1| unknown [Zea mays]
           gi|413947931|gb|AFW80580.1| ligatin [Zea mays]
          Length = 181

 Score =  260 bits (664), Expect = 4e-67
 Identities = 132/181 (72%), Positives = 140/181 (77%)
 Frame = -2

Query: 856 MFKKFSFEDISGQNQVKTSVQRKIRQSIAXXXXXXXXXXXXXXXXXXXXLVAKCQXXXXX 677
           MFKKFS EDISGQNQVK SVQRKIRQSIA                    +V KCQ     
Sbjct: 1   MFKKFSSEDISGQNQVKASVQRKIRQSIADEYPSLEPLLDDLLPKKSPMIVVKCQNHLNL 60

Query: 676 XXXXXXXXXXXVRDGPYMPTLRLLHQYPDIMKKFQVDRGAIKFVLAGANIMCPGLTSPGG 497
                      +RDGPYMPTLRLLHQYPDIMKKFQVDRGAIKFVL+GANIMCPGLTSPGG
Sbjct: 61  VVVNNVPLFFNIRDGPYMPTLRLLHQYPDIMKKFQVDRGAIKFVLSGANIMCPGLTSPGG 120

Query: 496 AMDDEVSEETPVAVMAEGKQHALAIGFTKLSAKDIRAVNKGIGVDNMHYLNDGLWKMERL 317
           A+DDEV EETPVA+MAEGKQHALAIG+TK+SAKDIR +NKGIGVDNMHYLNDGLWKMERL
Sbjct: 121 ALDDEVEEETPVAIMAEGKQHALAIGYTKMSAKDIRTINKGIGVDNMHYLNDGLWKMERL 180

Query: 316 E 314
           E
Sbjct: 181 E 181


>ref|XP_002457755.1| hypothetical protein SORBIDRAFT_03g012920 [Sorghum bicolor]
           gi|241929730|gb|EES02875.1| hypothetical protein
           SORBIDRAFT_03g012920 [Sorghum bicolor]
          Length = 181

 Score =  258 bits (659), Expect = 2e-66
 Identities = 131/181 (72%), Positives = 140/181 (77%)
 Frame = -2

Query: 856 MFKKFSFEDISGQNQVKTSVQRKIRQSIAXXXXXXXXXXXXXXXXXXXXLVAKCQXXXXX 677
           MFKKFS EDISGQNQVK SVQRKIRQSIA                    +V KCQ     
Sbjct: 1   MFKKFSSEDISGQNQVKASVQRKIRQSIADEYPSLEPLLDDLLPKKSPMIVVKCQNHLNL 60

Query: 676 XXXXXXXXXXXVRDGPYMPTLRLLHQYPDIMKKFQVDRGAIKFVLAGANIMCPGLTSPGG 497
                      +RDGPYMPTLRLLHQYP+IMKKFQVDRGAIKFVL+GANIMCPGLTSPGG
Sbjct: 61  VVVNNVPLFFNIRDGPYMPTLRLLHQYPNIMKKFQVDRGAIKFVLSGANIMCPGLTSPGG 120

Query: 496 AMDDEVSEETPVAVMAEGKQHALAIGFTKLSAKDIRAVNKGIGVDNMHYLNDGLWKMERL 317
           A+DDEV EETPVA+MAEGKQHALAIG+TK+SAKDIR +NKGIGVDNMHYLNDGLWKMERL
Sbjct: 121 ALDDEVEEETPVAIMAEGKQHALAIGYTKMSAKDIRTINKGIGVDNMHYLNDGLWKMERL 180

Query: 316 E 314
           E
Sbjct: 181 E 181


>ref|NP_001042871.1| Os01g0314300 [Oryza sativa Japonica Group]
           gi|20161407|dbj|BAB90331.1| MCT-1 protein-like [Oryza
           sativa Japonica Group] gi|20805113|dbj|BAB92785.1| MCT-1
           protein-like [Oryza sativa Japonica Group]
           gi|113532402|dbj|BAF04785.1| Os01g0314300 [Oryza sativa
           Japonica Group] gi|215706987|dbj|BAG93447.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|215740876|dbj|BAG97032.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|218188082|gb|EEC70509.1| hypothetical protein
           OsI_01604 [Oryza sativa Indica Group]
           gi|222618296|gb|EEE54428.1| hypothetical protein
           OsJ_01493 [Oryza sativa Japonica Group]
          Length = 181

 Score =  255 bits (651), Expect = 1e-65
 Identities = 129/181 (71%), Positives = 139/181 (76%)
 Frame = -2

Query: 856 MFKKFSFEDISGQNQVKTSVQRKIRQSIAXXXXXXXXXXXXXXXXXXXXLVAKCQXXXXX 677
           MFKKFSFEDIS QNQVK SVQRKIRQSIA                    +V KCQ     
Sbjct: 1   MFKKFSFEDISAQNQVKASVQRKIRQSIADEYPGLEPLLDDLLPKKSPMIVVKCQNHLNL 60

Query: 676 XXXXXXXXXXXVRDGPYMPTLRLLHQYPDIMKKFQVDRGAIKFVLAGANIMCPGLTSPGG 497
                      +RDGPYMPTLRLLHQYPDIMKKFQVDRGAIKFVL+GANIMCPGLTSPGG
Sbjct: 61  VVVNNVPLFFNIRDGPYMPTLRLLHQYPDIMKKFQVDRGAIKFVLSGANIMCPGLTSPGG 120

Query: 496 AMDDEVSEETPVAVMAEGKQHALAIGFTKLSAKDIRAVNKGIGVDNMHYLNDGLWKMERL 317
           ++D EV EETPVA+MAEGKQHALAIG+TK+SAKDI+ +NKGIGVDNMHYLNDGLWKMERL
Sbjct: 121 SLDVEVEEETPVAIMAEGKQHALAIGYTKMSAKDIKTINKGIGVDNMHYLNDGLWKMERL 180

Query: 316 E 314
           E
Sbjct: 181 E 181


>emb|CBI39540.3| unnamed protein product [Vitis vinifera]
          Length = 181

 Score =  253 bits (647), Expect = 4e-65
 Identities = 129/181 (71%), Positives = 140/181 (77%)
 Frame = -2

Query: 856 MFKKFSFEDISGQNQVKTSVQRKIRQSIAXXXXXXXXXXXXXXXXXXXXLVAKCQXXXXX 677
           MFKKFS ED+S QNQVK SVQRKIRQSIA                    +VAKCQ     
Sbjct: 1   MFKKFSSEDVSSQNQVKASVQRKIRQSIADEYPGLEPVLDDLLPKKSPLIVAKCQNHLNL 60

Query: 676 XXXXXXXXXXXVRDGPYMPTLRLLHQYPDIMKKFQVDRGAIKFVLAGANIMCPGLTSPGG 497
                      VRDGPYMPTLRLLHQYP+IMKK QVDRGAIKFVLAGANIMCPGLTSPGG
Sbjct: 61  VLVNNVPLFFNVRDGPYMPTLRLLHQYPNIMKKLQVDRGAIKFVLAGANIMCPGLTSPGG 120

Query: 496 AMDDEVSEETPVAVMAEGKQHALAIGFTKLSAKDIRAVNKGIGVDNMHYLNDGLWKMERL 317
            +DD+V+EE+PVA+MAEGKQHALAIGFTK+SAKDIRA+NKGIGVDNMHYLNDGLWKMERL
Sbjct: 121 VLDDDVAEESPVAIMAEGKQHALAIGFTKMSAKDIRAINKGIGVDNMHYLNDGLWKMERL 180

Query: 316 E 314
           +
Sbjct: 181 D 181


>emb|CBI83390.1| MCT-1 like PUA RNA binding-domain containing protein [Hordeum
           vulgare subsp. vulgare]
          Length = 181

 Score =  252 bits (644), Expect = 8e-65
 Identities = 128/181 (70%), Positives = 138/181 (76%)
 Frame = -2

Query: 856 MFKKFSFEDISGQNQVKTSVQRKIRQSIAXXXXXXXXXXXXXXXXXXXXLVAKCQXXXXX 677
           MFKKFS EDISGQNQVK SVQR+IRQSIA                    +V KCQ     
Sbjct: 1   MFKKFSSEDISGQNQVKASVQRRIRQSIAEEYPLLEPLLEDMLPKKSPMIVVKCQNHLNL 60

Query: 676 XXXXXXXXXXXVRDGPYMPTLRLLHQYPDIMKKFQVDRGAIKFVLAGANIMCPGLTSPGG 497
                      +RDGPYMPTLRLLHQYP+IMKKFQVDRGAIKFVL+GANIMCPGLTSPGG
Sbjct: 61  VVVNNVPLFFNIRDGPYMPTLRLLHQYPNIMKKFQVDRGAIKFVLSGANIMCPGLTSPGG 120

Query: 496 AMDDEVSEETPVAVMAEGKQHALAIGFTKLSAKDIRAVNKGIGVDNMHYLNDGLWKMERL 317
            +D+EV EETPVA+MAEGKQHALAIGFTK+SAKDI  +NKGIGVDNMHYLNDGLWKMERL
Sbjct: 121 VLDNEVGEETPVAIMAEGKQHALAIGFTKMSAKDISTINKGIGVDNMHYLNDGLWKMERL 180

Query: 316 E 314
           E
Sbjct: 181 E 181


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