BLASTX nr result

ID: Dioscorea21_contig00005747 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00005747
         (813 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003637074.1| Cell wall-associated hydrolase, partial [Med...    70   6e-10
gb|ADZ93524.1| NADH dehydrogenase subunit B [Eleocharis palustris]     57   5e-06
gb|ADZ93523.1| NADH dehydrogenase subunit B [Carex cordillerana]       57   5e-06
gb|AFB18481.1| NADH-plastoquinone oxidoreductase subunit 2, part...    57   5e-06
gb|AFB18475.1| NADH-plastoquinone oxidoreductase subunit 2, part...    57   5e-06

>ref|XP_003637074.1| Cell wall-associated hydrolase, partial [Medicago truncatula]
           gi|355503009|gb|AES84212.1| Cell wall-associated
           hydrolase, partial [Medicago truncatula]
          Length = 733

 Score = 70.1 bits (170), Expect = 6e-10
 Identities = 45/91 (49%), Positives = 47/91 (51%)
 Frame = -1

Query: 813 SPMGVLFTFPSWYYFTIGHLGVFRLAQCGPCRLTWDSVCPHATRACA*ASDLSATGLSGI 634
           SPMGVLFT PS YYF IGH GVF LA+      T   V PHATR                
Sbjct: 547 SPMGVLFTLPSRYYFAIGHPGVFSLARWSLLIHTGFHV-PHATRV--------------- 590

Query: 633 *GAADV*FALPQTCFYNLGCSHFASH*YGNR 541
               D   ALPQ  F+ LGCSHFA   YGNR
Sbjct: 591 -RQHDACIALPQPRFHGLGCSHFARRYYGNR 620


>gb|ADZ93524.1| NADH dehydrogenase subunit B [Eleocharis palustris]
          Length = 464

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 28/31 (90%), Positives = 29/31 (93%)
 Frame = +2

Query: 446 SSHGQIGCVIIGMIAGDSNDGYASMITYMLF 538
           SS GQIG VIIG+IAGDSNDGYASMITYMLF
Sbjct: 304 SSIGQIGYVIIGIIAGDSNDGYASMITYMLF 334


>gb|ADZ93523.1| NADH dehydrogenase subunit B [Carex cordillerana]
          Length = 253

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 28/31 (90%), Positives = 29/31 (93%)
 Frame = +2

Query: 446 SSHGQIGCVIIGMIAGDSNDGYASMITYMLF 538
           SS GQIG VIIG+IAGDSNDGYASMITYMLF
Sbjct: 106 SSIGQIGYVIIGIIAGDSNDGYASMITYMLF 136


>gb|AFB18481.1| NADH-plastoquinone oxidoreductase subunit 2, partial [Cyperus
           alternifolius]
          Length = 509

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 28/31 (90%), Positives = 29/31 (93%)
 Frame = +2

Query: 446 SSHGQIGCVIIGMIAGDSNDGYASMITYMLF 538
           SS GQIG VIIG+IAGDSNDGYASMITYMLF
Sbjct: 326 SSIGQIGYVIIGIIAGDSNDGYASMITYMLF 356


>gb|AFB18475.1| NADH-plastoquinone oxidoreductase subunit 2, partial [Belosynapsis
           ciliata]
          Length = 510

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 28/31 (90%), Positives = 29/31 (93%)
 Frame = +2

Query: 446 SSHGQIGCVIIGMIAGDSNDGYASMITYMLF 538
           SS GQIG VIIG+IAGDSNDGYASMITYMLF
Sbjct: 327 SSIGQIGYVIIGIIAGDSNDGYASMITYMLF 357


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