BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00005740
         (425 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528814.1| 50S ribosomal protein L28, chloroplast precu...   134   8e-30
ref|NP_565765.1| 50S ribosomal protein L28 [Arabidopsis thaliana...   132   2e-29
gb|AFK44373.1| unknown [Medicago truncatula]                          132   3e-29
ref|XP_002879453.1| 50S ribosomal protein L28, chloroplast [Arab...   132   4e-29
ref|XP_002315574.1| predicted protein [Populus trichocarpa] gi|2...   132   4e-29

>ref|XP_002528814.1| 50S ribosomal protein L28, chloroplast precursor, putative [Ricinus
           communis] gi|223531726|gb|EEF33548.1| 50S ribosomal
           protein L28, chloroplast precursor, putative [Ricinus
           communis]
          Length = 143

 Score =  134 bits (337), Expect = 8e-30
 Identities = 66/97 (68%), Positives = 74/97 (76%)
 Frame = +1

Query: 133 LGFSRSEFGGSRISISXXXXXXXXXXXXXXXXARRVCRFTGKKANRANKVSFSNHKTKKL 312
           +GF  S+  G +IS +                ARRVC FTGKKANRANKVSFSNHKTKKL
Sbjct: 34  IGFVTSQLSGIKISYNLPYLSNPTTPPLQSIVARRVCPFTGKKANRANKVSFSNHKTKKL 93

Query: 313 QFVNLQYKRVWWEAGKRFLKLRLSTKALKTIEKNGLD 423
           QFVNLQYK++WWEAGKR++KLRLSTKALKTIEKNGLD
Sbjct: 94  QFVNLQYKKIWWEAGKRYVKLRLSTKALKTIEKNGLD 130


>ref|NP_565765.1| 50S ribosomal protein L28 [Arabidopsis thaliana]
           gi|21542433|sp|O22795.2|RK28_ARATH RecName: Full=50S
           ribosomal protein L28, chloroplastic; AltName:
           Full=CL28; Flags: Precursor gi|18252877|gb|AAL62365.1|
           putative chloroplast 50S ribosomal protein L28
           [Arabidopsis thaliana] gi|20196843|gb|AAB80662.2|
           putative chloroplast 50S ribosomal protein L28
           [Arabidopsis thaliana] gi|21387067|gb|AAM47937.1|
           putative chloroplast 50S ribosomal protein L28
           [Arabidopsis thaliana] gi|21592705|gb|AAM64654.1|
           putative chloroplast 50S ribosomal protein L28
           [Arabidopsis thaliana] gi|330253742|gb|AEC08836.1| 50S
           ribosomal protein L28 [Arabidopsis thaliana]
          Length = 143

 Score =  132 bits (333), Expect = 2e-29
 Identities = 70/101 (69%), Positives = 74/101 (73%), Gaps = 4/101 (3%)
 Frame = +1

Query: 133 LGFSRSEFGGSRISISXXXXXXXXXXXXXXXX----ARRVCRFTGKKANRANKVSFSNHK 300
           LGF  S+  G RIS +                    ARR+C FTGKKANRANKVSFSNHK
Sbjct: 30  LGFLTSQLSGLRISYTPSDVINRISLPSFPGIQPIVARRICPFTGKKANRANKVSFSNHK 89

Query: 301 TKKLQFVNLQYKRVWWEAGKRFLKLRLSTKALKTIEKNGLD 423
           TKKLQFVNLQYKRVWWEAGKRF+KLRLSTKALKTIEKNGLD
Sbjct: 90  TKKLQFVNLQYKRVWWEAGKRFVKLRLSTKALKTIEKNGLD 130


>gb|AFK44373.1| unknown [Medicago truncatula]
          Length = 146

 Score =  132 bits (332), Expect = 3e-29
 Identities = 69/100 (69%), Positives = 75/100 (75%), Gaps = 2/100 (2%)
 Frame = +1

Query: 130 RLGFSRSEFGGSRIS--ISXXXXXXXXXXXXXXXXARRVCRFTGKKANRANKVSFSNHKT 303
           +LGF  S+  G +IS   S                A+RVC FTGKK+NRANKVSFSNHKT
Sbjct: 34  QLGFLNSQLSGLKISSQTSLKLPTPIVASPFQPIVAKRVCPFTGKKSNRANKVSFSNHKT 93

Query: 304 KKLQFVNLQYKRVWWEAGKRFLKLRLSTKALKTIEKNGLD 423
           KKLQFVNLQYKRVWWEAGKRF+KLRLSTKALKTIEKNGLD
Sbjct: 94  KKLQFVNLQYKRVWWEAGKRFVKLRLSTKALKTIEKNGLD 133


>ref|XP_002879453.1| 50S ribosomal protein L28, chloroplast [Arabidopsis lyrata subsp.
           lyrata] gi|297325292|gb|EFH55712.1| 50S ribosomal
           protein L28, chloroplast [Arabidopsis lyrata subsp.
           lyrata]
          Length = 143

 Score =  132 bits (331), Expect = 4e-29
 Identities = 70/101 (69%), Positives = 74/101 (73%), Gaps = 4/101 (3%)
 Frame = +1

Query: 133 LGFSRSEFGGSRISISXXXXXXXXXXXXXXXX----ARRVCRFTGKKANRANKVSFSNHK 300
           LGF  S+  G RIS +                    ARR+C FTGKKANRANKVSFSNHK
Sbjct: 30  LGFLTSQLSGVRISHAPSDVINRISVPSFPGIQPIVARRICPFTGKKANRANKVSFSNHK 89

Query: 301 TKKLQFVNLQYKRVWWEAGKRFLKLRLSTKALKTIEKNGLD 423
           TKKLQFVNLQYKRVWWEAGKRF+KLRLSTKALKTIEKNGLD
Sbjct: 90  TKKLQFVNLQYKRVWWEAGKRFVKLRLSTKALKTIEKNGLD 130


>ref|XP_002315574.1| predicted protein [Populus trichocarpa] gi|222864614|gb|EEF01745.1|
           predicted protein [Populus trichocarpa]
          Length = 118

 Score =  132 bits (331), Expect = 4e-29
 Identities = 68/98 (69%), Positives = 74/98 (75%), Gaps = 1/98 (1%)
 Frame = +1

Query: 133 LGFSRSEFGGSRISISXXXXXXXXXXXXXXXX-ARRVCRFTGKKANRANKVSFSNHKTKK 309
           +GF  S+  G RIS +                 ARR+C FTGKKANRANKVSFSNHKTKK
Sbjct: 8   IGFVTSQLSGIRISYNPPKPLSAPFSPALQPVIARRICPFTGKKANRANKVSFSNHKTKK 67

Query: 310 LQFVNLQYKRVWWEAGKRFLKLRLSTKALKTIEKNGLD 423
           LQFVNLQYKRVWWEAGKR++KLRLSTKALKTIEKNGLD
Sbjct: 68  LQFVNLQYKRVWWEAGKRYVKLRLSTKALKTIEKNGLD 105