BLASTX nr result

ID: Dioscorea21_contig00005728 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00005728
         (220 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274985.1| PREDICTED: 60S ribosomal protein L21-1 [Viti...   149   3e-34
tpg|DAA49694.1| TPA: 60S ribosomal protein L21 [Zea mays]             146   2e-33
gb|AFW68643.1| hypothetical protein ZEAMMB73_659156 [Zea mays]        146   2e-33
ref|XP_002464508.1| hypothetical protein SORBIDRAFT_01g019840 [S...   146   2e-33
gb|ACR36408.1| unknown [Zea mays] gi|413934091|gb|AFW68642.1| 60...   146   2e-33

>ref|XP_002274985.1| PREDICTED: 60S ribosomal protein L21-1 [Vitis vinifera]
           gi|147844300|emb|CAN82115.1| hypothetical protein
           VITISV_031340 [Vitis vinifera]
          Length = 164

 Score =  149 bits (375), Expect = 3e-34
 Identities = 66/69 (95%), Positives = 69/69 (100%)
 Frame = -3

Query: 209 MPAGHGVRSRTRDLFARPFRKKGYIPLTIYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGR 30
           MPAGHG+RSRTRDLFARPFRKKGYIPLT+YLRTYKIGDYVDIKVNGA+HKGMPHKFYHGR
Sbjct: 1   MPAGHGLRSRTRDLFARPFRKKGYIPLTVYLRTYKIGDYVDIKVNGAIHKGMPHKFYHGR 60

Query: 29  TGKVWNVTK 3
           TGKVWNVTK
Sbjct: 61  TGKVWNVTK 69


>tpg|DAA49694.1| TPA: 60S ribosomal protein L21 [Zea mays]
          Length = 164

 Score =  146 bits (368), Expect = 2e-33
 Identities = 65/69 (94%), Positives = 68/69 (98%)
 Frame = -3

Query: 209 MPAGHGVRSRTRDLFARPFRKKGYIPLTIYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGR 30
           MPAGHG+RSRTRDLFARPFRKKGYIPLT YLRTYKIGDYVD+KVNGAVHKGMPHKFYHGR
Sbjct: 1   MPAGHGLRSRTRDLFARPFRKKGYIPLTTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGR 60

Query: 29  TGKVWNVTK 3
           TG+VWNVTK
Sbjct: 61  TGRVWNVTK 69


>gb|AFW68643.1| hypothetical protein ZEAMMB73_659156 [Zea mays]
          Length = 90

 Score =  146 bits (368), Expect = 2e-33
 Identities = 65/69 (94%), Positives = 68/69 (98%)
 Frame = -3

Query: 209 MPAGHGVRSRTRDLFARPFRKKGYIPLTIYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGR 30
           MPAGHG+RSRTRDLFARPFRKKGYIPLT YLRTYKIGDYVD+KVNGAVHKGMPHKFYHGR
Sbjct: 1   MPAGHGLRSRTRDLFARPFRKKGYIPLTTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGR 60

Query: 29  TGKVWNVTK 3
           TG+VWNVTK
Sbjct: 61  TGRVWNVTK 69


>ref|XP_002464508.1| hypothetical protein SORBIDRAFT_01g019840 [Sorghum bicolor]
           gi|241918362|gb|EER91506.1| hypothetical protein
           SORBIDRAFT_01g019840 [Sorghum bicolor]
          Length = 164

 Score =  146 bits (368), Expect = 2e-33
 Identities = 65/69 (94%), Positives = 68/69 (98%)
 Frame = -3

Query: 209 MPAGHGVRSRTRDLFARPFRKKGYIPLTIYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGR 30
           MPAGHG+RSRTRDLFARPFRKKGYIPLT YLRTYKIGDYVD+KVNGAVHKGMPHKFYHGR
Sbjct: 1   MPAGHGLRSRTRDLFARPFRKKGYIPLTTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGR 60

Query: 29  TGKVWNVTK 3
           TG+VWNVTK
Sbjct: 61  TGRVWNVTK 69


>gb|ACR36408.1| unknown [Zea mays] gi|413934091|gb|AFW68642.1| 60S ribosomal
           protein L21 [Zea mays]
          Length = 164

 Score =  146 bits (368), Expect = 2e-33
 Identities = 65/69 (94%), Positives = 68/69 (98%)
 Frame = -3

Query: 209 MPAGHGVRSRTRDLFARPFRKKGYIPLTIYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGR 30
           MPAGHG+RSRTRDLFARPFRKKGYIPLT YLRTYKIGDYVD+KVNGAVHKGMPHKFYHGR
Sbjct: 1   MPAGHGLRSRTRDLFARPFRKKGYIPLTTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGR 60

Query: 29  TGKVWNVTK 3
           TG+VWNVTK
Sbjct: 61  TGRVWNVTK 69


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