BLASTX nr result

ID: Dioscorea21_contig00005727 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00005727
         (370 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280685.1| PREDICTED: 60S ribosomal protein L21-1 [Viti...   239   1e-61
ref|XP_002322741.1| predicted protein [Populus trichocarpa] gi|2...   239   2e-61
ref|XP_002531173.1| 60S ribosomal protein L21, putative [Ricinus...   238   5e-61
ref|XP_002309287.1| predicted protein [Populus trichocarpa] gi|1...   237   8e-61
gb|AEO32485.1| hypothetical protein [Amblyomma maculatum]             236   2e-60

>ref|XP_002280685.1| PREDICTED: 60S ribosomal protein L21-1 [Vitis vinifera]
           gi|147828042|emb|CAN68510.1| hypothetical protein
           VITISV_043838 [Vitis vinifera]
           gi|297739802|emb|CBI29984.3| unnamed protein product
           [Vitis vinifera]
          Length = 165

 Score =  239 bits (611), Expect = 1e-61
 Identities = 113/119 (94%), Positives = 117/119 (98%)
 Frame = -3

Query: 359 MPAGHGVRSRTRDLFARPFRKKGYIPLTTYLRTFKIGDYVDVKVNGAVHKGMPHKFYHGR 180
           MPAGHG+RSRTRDLFARPFRKKGYIPLTTYLRTF+IGDYVD+KVNGAVHKGMPHKFYHGR
Sbjct: 1   MPAGHGLRSRTRDLFARPFRKKGYIPLTTYLRTFRIGDYVDIKVNGAVHKGMPHKFYHGR 60

Query: 179 TGKVWNVTKRAIGVEVNKQVGNRIIRKRIHVRVEHVMPSRCTEEFRLRKKKNDELKAEA 3
           TGKVWNVTKRAIGVEVNKQVGNRII+KRIHVRVEHV PSRCTEEFRLRK KNDELKAEA
Sbjct: 61  TGKVWNVTKRAIGVEVNKQVGNRIIKKRIHVRVEHVQPSRCTEEFRLRKLKNDELKAEA 119


>ref|XP_002322741.1| predicted protein [Populus trichocarpa] gi|222867371|gb|EEF04502.1|
           predicted protein [Populus trichocarpa]
          Length = 164

 Score =  239 bits (610), Expect = 2e-61
 Identities = 112/119 (94%), Positives = 119/119 (100%)
 Frame = -3

Query: 359 MPAGHGVRSRTRDLFARPFRKKGYIPLTTYLRTFKIGDYVDVKVNGAVHKGMPHKFYHGR 180
           MPAGHG+RSRTRDLFARPFRKKGYIPLTTYLRT+KIGD+VDVKVNGAVHKGMPHKFYHGR
Sbjct: 1   MPAGHGLRSRTRDLFARPFRKKGYIPLTTYLRTYKIGDHVDVKVNGAVHKGMPHKFYHGR 60

Query: 179 TGKVWNVTKRAIGVEVNKQVGNRIIRKRIHVRVEHVMPSRCTEEFRLRKKKNDELKAEA 3
           TG+VWNVTKRAIGVEVNKQVGNRIIRKRIHVRVEH++PSRCTEEFRLRKKKND+LKAEA
Sbjct: 61  TGRVWNVTKRAIGVEVNKQVGNRIIRKRIHVRVEHLLPSRCTEEFRLRKKKNDQLKAEA 119


>ref|XP_002531173.1| 60S ribosomal protein L21, putative [Ricinus communis]
           gi|223529243|gb|EEF31216.1| 60S ribosomal protein L21,
           putative [Ricinus communis]
          Length = 164

 Score =  238 bits (606), Expect = 5e-61
 Identities = 112/119 (94%), Positives = 117/119 (98%)
 Frame = -3

Query: 359 MPAGHGVRSRTRDLFARPFRKKGYIPLTTYLRTFKIGDYVDVKVNGAVHKGMPHKFYHGR 180
           MPAGHG+RSRTRDLFARPFRKKGYIPLTTYLRTFKIGDYVDVKVNGAVHKGMPHKFYHGR
Sbjct: 1   MPAGHGLRSRTRDLFARPFRKKGYIPLTTYLRTFKIGDYVDVKVNGAVHKGMPHKFYHGR 60

Query: 179 TGKVWNVTKRAIGVEVNKQVGNRIIRKRIHVRVEHVMPSRCTEEFRLRKKKNDELKAEA 3
           TG+VWNVTKRA+GVEVNKQVGNRII+KRIHVRVEH+  SRCTEEFRLRKKKNDELKAEA
Sbjct: 61  TGRVWNVTKRAVGVEVNKQVGNRIIKKRIHVRVEHLQVSRCTEEFRLRKKKNDELKAEA 119


>ref|XP_002309287.1| predicted protein [Populus trichocarpa] gi|118488898|gb|ABK96258.1|
           unknown [Populus trichocarpa x Populus deltoides]
           gi|222855263|gb|EEE92810.1| predicted protein [Populus
           trichocarpa]
          Length = 164

 Score =  237 bits (604), Expect = 8e-61
 Identities = 110/119 (92%), Positives = 118/119 (99%)
 Frame = -3

Query: 359 MPAGHGVRSRTRDLFARPFRKKGYIPLTTYLRTFKIGDYVDVKVNGAVHKGMPHKFYHGR 180
           MPAGHG+RSRTRDLFARPFRKKGYIPLTTYLRT+KIGD VD+KVNGAVHKGMPHKFYHGR
Sbjct: 1   MPAGHGLRSRTRDLFARPFRKKGYIPLTTYLRTYKIGDNVDIKVNGAVHKGMPHKFYHGR 60

Query: 179 TGKVWNVTKRAIGVEVNKQVGNRIIRKRIHVRVEHVMPSRCTEEFRLRKKKNDELKAEA 3
           TG+VWNVTKRAIGVE+NKQVGNRIIRKRIHVRVEH++PSRCTEEFRLRKKKND+LKAEA
Sbjct: 61  TGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHLLPSRCTEEFRLRKKKNDQLKAEA 119


>gb|AEO32485.1| hypothetical protein [Amblyomma maculatum]
          Length = 128

 Score =  236 bits (601), Expect = 2e-60
 Identities = 111/119 (93%), Positives = 116/119 (97%)
 Frame = -3

Query: 359 MPAGHGVRSRTRDLFARPFRKKGYIPLTTYLRTFKIGDYVDVKVNGAVHKGMPHKFYHGR 180
           MPAGHG+RSRTRDLFARPFRKKGYIPLTTYLRT+K GDYVDVKVNGAVHKGMPHKFYHGR
Sbjct: 1   MPAGHGLRSRTRDLFARPFRKKGYIPLTTYLRTYKTGDYVDVKVNGAVHKGMPHKFYHGR 60

Query: 179 TGKVWNVTKRAIGVEVNKQVGNRIIRKRIHVRVEHVMPSRCTEEFRLRKKKNDELKAEA 3
           TGKVWNVTKRAIGVE+NKQVGNRIIRKRIHVRVEHV PSRCTE+FRLRK KND+LKAEA
Sbjct: 61  TGKVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRCTEDFRLRKIKNDKLKAEA 119


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