BLASTX nr result

ID: Dioscorea21_contig00005719 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00005719
         (218 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004145426.1| PREDICTED: ubiquinol oxidase 4, chloroplasti...    64   2e-08
ref|XP_002317190.1| predicted protein [Populus trichocarpa] gi|2...    59   5e-07
ref|XP_002518411.1| Alternative oxidase 4, chloroplast precursor...    57   1e-06
ref|NP_001234511.1| plastid quinol oxidase [Solanum lycopersicum...    56   3e-06
emb|CCK49809.1| PTOX protein, partial [Solanum lycopersicum]           56   3e-06

>ref|XP_004145426.1| PREDICTED: ubiquinol oxidase 4, chloroplastic/chromoplastic-like
           [Cucumis sativus] gi|449525172|ref|XP_004169592.1|
           PREDICTED: ubiquinol oxidase 4,
           chloroplastic/chromoplastic-like [Cucumis sativus]
          Length = 355

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 28/42 (66%), Positives = 34/42 (80%)
 Frame = -2

Query: 217 GNLRSPHSYMNTDPDEDEPEPGCSTPEADCEGIIDCVKKSLT 92
           GNLRSPHSY  + P+EDEP   C+  EADCEGI+DC+KKS+T
Sbjct: 307 GNLRSPHSYSESCPEEDEPL--CNLAEADCEGIVDCIKKSIT 346


>ref|XP_002317190.1| predicted protein [Populus trichocarpa] gi|222860255|gb|EEE97802.1|
           predicted protein [Populus trichocarpa]
          Length = 358

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 26/42 (61%), Positives = 31/42 (73%)
 Frame = -2

Query: 217 GNLRSPHSYMNTDPDEDEPEPGCSTPEADCEGIIDCVKKSLT 92
           GNLRSPHSY     D  E + GC  P+ADCEGI+DC+KKS+T
Sbjct: 312 GNLRSPHSYPE---DAFEDDTGCDLPQADCEGIVDCIKKSVT 350


>ref|XP_002518411.1| Alternative oxidase 4, chloroplast precursor, putative [Ricinus
           communis] gi|223542256|gb|EEF43798.1| Alternative
           oxidase 4, chloroplast precursor, putative [Ricinus
           communis]
          Length = 356

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 26/42 (61%), Positives = 32/42 (76%)
 Frame = -2

Query: 217 GNLRSPHSYMNTDPDEDEPEPGCSTPEADCEGIIDCVKKSLT 92
           GNLRSPHS++  D ++     GC  PEADCEGI+DC+KKSLT
Sbjct: 307 GNLRSPHSHVENDIEDVS---GCILPEADCEGIVDCMKKSLT 345


>ref|NP_001234511.1| plastid quinol oxidase [Solanum lycopersicum]
           gi|9937099|gb|AAG02286.1|AF177979_1 plastid terminal
           oxidase [Solanum lycopersicum]
           gi|9937101|gb|AAG02287.1|AF177980_1 plastid terminal
           oxidase [Solanum lycopersicum]
           gi|10505366|gb|AAG18449.1|AF302931_1 plastid quinol
           oxidase [Solanum lycopersicum]
           gi|10505368|gb|AAG18450.1|AF302932_1 plastid quinol
           oxidase [Solanum lycopersicum]
          Length = 366

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 26/43 (60%), Positives = 33/43 (76%), Gaps = 1/43 (2%)
 Frame = -2

Query: 217 GNLRSPHSYMNTDP-DEDEPEPGCSTPEADCEGIIDCVKKSLT 92
           G+LRSPH    TDP D+ E + GCS P+ADC GI+DC+KKS+T
Sbjct: 321 GSLRSPH----TDPCDDSEDDTGCSVPQADCIGIVDCIKKSVT 359


>emb|CCK49809.1| PTOX protein, partial [Solanum lycopersicum]
          Length = 88

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 26/43 (60%), Positives = 33/43 (76%), Gaps = 1/43 (2%)
 Frame = -2

Query: 217 GNLRSPHSYMNTDP-DEDEPEPGCSTPEADCEGIIDCVKKSLT 92
           G+LRSPH    TDP D+ E + GCS P+ADC GI+DC+KKS+T
Sbjct: 43  GSLRSPH----TDPCDDSEDDTGCSVPQADCIGIVDCIKKSVT 81


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