BLASTX nr result

ID: Dioscorea21_contig00005718 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00005718
         (298 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABI34274.1| IS10 transposase, putative [Solanum lycopersicum]       67   1e-09
gb|AFK47247.1| unknown [Medicago truncatula]                           65   8e-09
ref|XP_002864822.1| hypothetical protein ARALYDRAFT_496469 [Arab...    62   4e-08
ref|NP_001190601.1| uncharacterized protein [Arabidopsis thalian...    62   4e-08
ref|XP_002511430.1| conserved hypothetical protein [Ricinus comm...    62   5e-08

>gb|ABI34274.1| IS10 transposase, putative [Solanum lycopersicum]
          Length = 648

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 37/72 (51%), Positives = 43/72 (59%)
 Frame = -3

Query: 296 EWSEIVAGPRWKTXXXXXXXXXXIGRTVSRFQYDPLSYALNFXXXXXXXXXXQEEAAGIR 117
           EWSEIVAGPRWKT            R  ++FQYDPLSY+LNF          +EE   +R
Sbjct: 76  EWSEIVAGPRWKTFIRRFHRNKSGNRN-AKFQYDPLSYSLNFDEGRGNNGEEEEELV-LR 133

Query: 116 NFSARFASAPAS 81
           NFS R+AS PAS
Sbjct: 134 NFSTRYASIPAS 145


>gb|AFK47247.1| unknown [Medicago truncatula]
          Length = 143

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 36/79 (45%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
 Frame = -3

Query: 296 EWSEIVAGPRWKTXXXXXXXXXXIG-RTVSRFQYDPLSYALNFXXXXXXXXXXQEEAAGI 120
           EWSEIVAGPRWKT           G R   ++QYDPLSYALNF           +   G 
Sbjct: 54  EWSEIVAGPRWKTFIRRFNRNKSGGFRHAGKYQYDPLSYALNF-DEGQNGEFENDSPDGF 112

Query: 119 RNFSARFASAPASVDHDET 63
           RNFSAR+ +A  ++  D T
Sbjct: 113 RNFSARYVAAVPTLKSDST 131


>ref|XP_002864822.1| hypothetical protein ARALYDRAFT_496469 [Arabidopsis lyrata subsp.
           lyrata] gi|297310657|gb|EFH41081.1| hypothetical protein
           ARALYDRAFT_496469 [Arabidopsis lyrata subsp. lyrata]
          Length = 360

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 35/73 (47%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
 Frame = -3

Query: 296 EWSEIVAGPRWKTXXXXXXXXXXIGR---TVSRFQYDPLSYALNFXXXXXXXXXXQEEAA 126
           EWSEIVAGPRWKT           GR      +FQYDPLSY+LNF               
Sbjct: 265 EWSEIVAGPRWKTFIRRFNRDPRRGRDWDASEKFQYDPLSYSLNFDDDDEDEYVG---LG 321

Query: 125 GIRNFSARFASAP 87
           G+R+FS RFAS P
Sbjct: 322 GLRSFSTRFASVP 334


>ref|NP_001190601.1| uncharacterized protein [Arabidopsis thaliana]
           gi|10177465|dbj|BAB10856.1| unnamed protein product
           [Arabidopsis thaliana] gi|26450527|dbj|BAC42376.1|
           unknown protein [Arabidopsis thaliana]
           gi|332010283|gb|AED97666.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 167

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 35/73 (47%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
 Frame = -3

Query: 296 EWSEIVAGPRWKTXXXXXXXXXXIGR---TVSRFQYDPLSYALNFXXXXXXXXXXQEEAA 126
           EWSEIVAGPRWKT           GR      +FQYDPLSY+LNF               
Sbjct: 71  EWSEIVAGPRWKTFIRRFNRDPRRGRDWDASEKFQYDPLSYSLNFDDDDEEDEYVG--LG 128

Query: 125 GIRNFSARFASAP 87
           G+R+FS RFAS P
Sbjct: 129 GLRSFSTRFASVP 141


>ref|XP_002511430.1| conserved hypothetical protein [Ricinus communis]
           gi|223550545|gb|EEF52032.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 174

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 36/77 (46%), Positives = 43/77 (55%), Gaps = 5/77 (6%)
 Frame = -3

Query: 296 EWSEIVAGPRWKTXXXXXXXXXXI---GRTVSRFQYDPLSYALNFXXXXXXXXXXQE--E 132
           EWSEIVAGP+WKT              GR   +FQYDPLSYALNF          +E  +
Sbjct: 79  EWSEIVAGPKWKTFIRRFNRCNRGSGNGRHNGKFQYDPLSYALNFDEGQNGHFHDEENDD 138

Query: 131 AAGIRNFSARFASAPAS 81
             G R+FS+R+AS  AS
Sbjct: 139 YGGFRDFSSRYASVSAS 155


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