BLASTX nr result

ID: Dioscorea21_contig00005673 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00005673
         (373 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEO32741.1| hypothetical protein [Amblyomma maculatum]             168   5e-40
ref|XP_002279684.1| PREDICTED: uncharacterized RNA-binding prote...   158   5e-37
ref|XP_002509834.1| Arginine/serine-rich-splicing factor, putati...   156   2e-36
ref|XP_002304510.1| predicted protein [Populus trichocarpa] gi|2...   156   2e-36
emb|CBI34365.3| unnamed protein product [Vitis vinifera]              147   1e-33

>gb|AEO32741.1| hypothetical protein [Amblyomma maculatum]
          Length = 212

 Score =  168 bits (425), Expect = 5e-40
 Identities = 87/124 (70%), Positives = 96/124 (77%)
 Frame = -1

Query: 373 RYTSRSITPPPKXXXXXXXXXXXXXXXXXXSQDVEGARNPGNNLYVTGLSTRVTSSDLEK 194
           RYTSRSITPPPK                  SQD   A NPGNNLY+TGLSTRVTSSDLE+
Sbjct: 13  RYTSRSITPPPKRHSRSRSPQRSRARSRSRSQDSGHASNPGNNLYITGLSTRVTSSDLEE 72

Query: 193 YFNKEGKVLECHVVVDPRTRESRGFGFVTMETMKDADRCVKYLDRSVLEGRLIKVEKAKR 14
           YF+KEGKV EC VV+DPR+RESRGF FVTMET++DADRCVK+L+RSVLEGRLI VEKAKR
Sbjct: 73  YFSKEGKVRECEVVLDPRSRESRGFAFVTMETVEDADRCVKHLNRSVLEGRLITVEKAKR 132

Query: 13  SRGR 2
             GR
Sbjct: 133 KCGR 136


>ref|XP_002279684.1| PREDICTED: uncharacterized RNA-binding protein C25G10.01 [Vitis
           vinifera]
          Length = 211

 Score =  158 bits (399), Expect = 5e-37
 Identities = 76/93 (81%), Positives = 84/93 (90%)
 Frame = -1

Query: 280 QDVEGARNPGNNLYVTGLSTRVTSSDLEKYFNKEGKVLECHVVVDPRTRESRGFGFVTME 101
           +D   A NPGNNLYVTGLSTRV +SDLEKYFN EGKV+ECH+V DPRTRESRGFGFVTME
Sbjct: 44  RDSVDAVNPGNNLYVTGLSTRVNASDLEKYFNSEGKVVECHLVTDPRTRESRGFGFVTME 103

Query: 100 TMKDADRCVKYLDRSVLEGRLIKVEKAKRSRGR 2
           T++DADRC+KYL+RSVLEGRLI VEKAKR RGR
Sbjct: 104 TVEDADRCIKYLNRSVLEGRLITVEKAKRRRGR 136


>ref|XP_002509834.1| Arginine/serine-rich-splicing factor, putative [Ricinus communis]
           gi|223549733|gb|EEF51221.1|
           Arginine/serine-rich-splicing factor, putative [Ricinus
           communis]
          Length = 204

 Score =  156 bits (394), Expect = 2e-36
 Identities = 75/88 (85%), Positives = 81/88 (92%)
 Frame = -1

Query: 265 ARNPGNNLYVTGLSTRVTSSDLEKYFNKEGKVLECHVVVDPRTRESRGFGFVTMETMKDA 86
           A NPGNNLYVTGLSTRVT+ DLEKYF KEGKVLECH+V DPRTRESRGF FVTMET++DA
Sbjct: 42  AANPGNNLYVTGLSTRVTTGDLEKYFGKEGKVLECHLVTDPRTRESRGFAFVTMETLEDA 101

Query: 85  DRCVKYLDRSVLEGRLIKVEKAKRSRGR 2
           +RCVKYL+RSVLEGRLI VEKAKR RGR
Sbjct: 102 ERCVKYLNRSVLEGRLITVEKAKRRRGR 129


>ref|XP_002304510.1| predicted protein [Populus trichocarpa] gi|222841942|gb|EEE79489.1|
           predicted protein [Populus trichocarpa]
          Length = 208

 Score =  156 bits (394), Expect = 2e-36
 Identities = 76/92 (82%), Positives = 83/92 (90%)
 Frame = -1

Query: 277 DVEGARNPGNNLYVTGLSTRVTSSDLEKYFNKEGKVLECHVVVDPRTRESRGFGFVTMET 98
           D   A NPGNNLYVTGLSTRVTSSDLEKYF+ EGKVLECH+V DPRTRESRGF FVTMET
Sbjct: 39  DSGDASNPGNNLYVTGLSTRVTSSDLEKYFSSEGKVLECHLVTDPRTRESRGFAFVTMET 98

Query: 97  MKDADRCVKYLDRSVLEGRLIKVEKAKRSRGR 2
           ++DA+RCVKYL+RSVLEGR+I VEKAKR RGR
Sbjct: 99  VEDANRCVKYLNRSVLEGRVITVEKAKRKRGR 130


>emb|CBI34365.3| unnamed protein product [Vitis vinifera]
          Length = 133

 Score =  147 bits (370), Expect = 1e-33
 Identities = 70/86 (81%), Positives = 78/86 (90%)
 Frame = -1

Query: 280 QDVEGARNPGNNLYVTGLSTRVTSSDLEKYFNKEGKVLECHVVVDPRTRESRGFGFVTME 101
           +D   A NPGNNLYVTGLSTRV +SDLEKYFN EGKV+ECH+V DPRTRESRGFGFVTME
Sbjct: 44  RDSVDAVNPGNNLYVTGLSTRVNASDLEKYFNSEGKVVECHLVTDPRTRESRGFGFVTME 103

Query: 100 TMKDADRCVKYLDRSVLEGRLIKVEK 23
           T++DADRC+KYL+RSVLEGRLI VEK
Sbjct: 104 TVEDADRCIKYLNRSVLEGRLITVEK 129


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