BLASTX nr result

ID: Dioscorea21_contig00005672 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00005672
         (1218 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298194.1| chromatin remodeling complex subunit [Populu...   280   5e-73
ref|XP_002303178.1| hypothetical protein POPTRDRAFT_756569 [Popu...   274   3e-71
ref|XP_003557609.1| PREDICTED: uncharacterized protein LOC100821...   268   3e-69
ref|XP_003518059.1| PREDICTED: uncharacterized protein LOC100794...   267   4e-69
emb|CBI30029.3| unnamed protein product [Vitis vinifera]              264   4e-68

>ref|XP_002298194.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222845452|gb|EEE82999.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 323

 Score =  280 bits (716), Expect = 5e-73
 Identities = 161/302 (53%), Positives = 184/302 (60%), Gaps = 20/302 (6%)
 Frame = +3

Query: 369  MASKGPRSKLDHDTRARRQKALEAPKEPPRPKAHWDHVLEEMVWLSKDFESERKWKLTQA 548
            MASKGPRSKLDH+TRARRQKALEAP+EP RPK HWDHVLEEMVWLSKDFESERKWKL QA
Sbjct: 1    MASKGPRSKLDHETRARRQKALEAPREPRRPKTHWDHVLEEMVWLSKDFESERKWKLAQA 60

Query: 549  KKVAVRASKSILEHATRGXXXXXXXXXXXXXVAANISKDVKKFWMKVEKLVLYKHQLELE 728
            KKVA+RASK +L+ ATRG             VA NISKDVKKFW+K+EKLVLYKHQ+EL+
Sbjct: 61   KKVALRASKGMLDQATRGEKKLKEEEQRLRKVALNISKDVKKFWVKIEKLVLYKHQMELD 120

Query: 729  ERKKKALDKQLNFLLGQTERYSTMLAENLVDKPNSFKQAPVDSGIEQTCILDRER--DKN 902
            E+KKKALDKQL FLLGQTERYSTMLAENLVDKP+           EQ    D+ R   K 
Sbjct: 121  EKKKKALDKQLEFLLGQTERYSTMLAENLVDKPS-----------EQYAAQDKPRIAYKK 169

Query: 903  GPTESTPEPVN------------------HLEKMESDDDYGLRSEDEPGDDEQTIDXXXX 1028
            G   + PE VN                   L+  ++DD+Y ++SEDE  DDE TI+    
Sbjct: 170  GDDANIPEQVNDGKRQISLPNVWHNCLEPQLDTTDNDDEYDVQSEDEVEDDEHTIEEDEA 229

Query: 1029 XXXXXXXXXXXXXXXXXXDQPLEEILKSYMNNTVSREVSPEGVQDVTEPVMKPKDHINDS 1208
                              D PLEE+L  Y     S E S  G     +P    +DH    
Sbjct: 230  LITAEERQEELEALHNETDIPLEELLNRYPVEKGSGESSENG----AKPSANGEDHCERK 285

Query: 1209 WN 1214
             N
Sbjct: 286  GN 287


>ref|XP_002303178.1| hypothetical protein POPTRDRAFT_756569 [Populus trichocarpa]
            gi|222840610|gb|EEE78157.1| hypothetical protein
            POPTRDRAFT_756569 [Populus trichocarpa]
          Length = 418

 Score =  274 bits (701), Expect = 3e-71
 Identities = 155/279 (55%), Positives = 178/279 (63%), Gaps = 15/279 (5%)
 Frame = +3

Query: 369  MASKGPRSKLDHDTRARRQKALEAPKEPPRPKAHWDHVLEEMVWLSKDFESERKWKLTQA 548
            MASKGPRSKLDH+TRARRQKALEAP+EP RPK HWDHVLEEMVWLSKDFESERKWKL QA
Sbjct: 1    MASKGPRSKLDHETRARRQKALEAPREPRRPKTHWDHVLEEMVWLSKDFESERKWKLAQA 60

Query: 549  KKVAVRASKSILEHATRGXXXXXXXXXXXXXVAANISKDVKKFWMKVEKLVLYKHQLELE 728
            KKVA+RASK +L+ ATRG             VA NISKDVKKFW+K+EKLVLYKHQ+EL+
Sbjct: 61   KKVALRASKGMLDQATRGEKKLKEEEQRLRKVAVNISKDVKKFWVKIEKLVLYKHQMELD 120

Query: 729  ERKKKALDKQLNFLLGQTERYSTMLAENLVDKPNSFKQAPVDSGIEQTCILDR-ERDKNG 905
            E+KKKALDK L FLLGQTERYSTMLAENLV+KP     AP     E+  I DR   D N 
Sbjct: 121  EKKKKALDKHLEFLLGQTERYSTMLAENLVEKPPEQYFAP-----EKPSIADRVGDDANT 175

Query: 906  PTE--------------STPEPVNHLEKMESDDDYGLRSEDEPGDDEQTIDXXXXXXXXX 1043
            P +              S       ++  ++DD+Y ++SEDE  DDE TI+         
Sbjct: 176  PLQVVDAGQWADILIKFSAHCLEAQVDTADNDDEYDVQSEDEVEDDEHTIEEDEALITKE 235

Query: 1044 XXXXXXXXXXXXXDQPLEEILKSYMNNTVSREVSPEGVQ 1160
                         D PLEE+LK Y      RE S  G +
Sbjct: 236  ERQEELEALHNEMDIPLEELLKRYAVEKGGRESSENGAK 274


>ref|XP_003557609.1| PREDICTED: uncharacterized protein LOC100821638 [Brachypodium
            distachyon]
          Length = 2015

 Score =  268 bits (684), Expect = 3e-69
 Identities = 148/274 (54%), Positives = 179/274 (65%), Gaps = 2/274 (0%)
 Frame = +3

Query: 369  MASKGPRSKLDHDTRARRQKALEAPKEPPRPKAHWDHVLEEMVWLSKDFESERKWKLTQA 548
            MASKG RSKLDH+TRARR+KALEAP+EP +PK HWDHVL EMVWL+K+FESERKWKL+ A
Sbjct: 1    MASKGARSKLDHETRARRKKALEAPREPRKPKVHWDHVLGEMVWLAKEFESERKWKLSMA 60

Query: 549  KKVAVRASKSILEHATRGXXXXXXXXXXXXXVAANISKDVKKFWMKVEKLVLYKHQLELE 728
            KK+A RA+  I++ AT+              VA NISKDVKKFW K+EKLVLYK+QLE+E
Sbjct: 61   KKIAQRANMGIVDQATKDEKKQKEGEYRLRKVALNISKDVKKFWTKIEKLVLYKNQLEVE 120

Query: 729  ERKKKALDKQLNFLLGQTERYSTMLAENLVDKPNSFKQAPVDSGIEQTCILDRERDKNGP 908
            ERKKKALDKQL+FLLGQTERYSTMLAENLVD P+   Q   ++G  QT +  +E +    
Sbjct: 121  ERKKKALDKQLDFLLGQTERYSTMLAENLVDVPHLQTQ---ENGPLQTNLPSQEEE---V 174

Query: 909  TESTPEPVNH--LEKMESDDDYGLRSEDEPGDDEQTIDXXXXXXXXXXXXXXXXXXXXXX 1082
             E     + H  L+KME DDDY     +EP DDE TID                      
Sbjct: 175  AEENTNALMHDDLDKMEIDDDYNSSLNEEPEDDEHTIDEDEAQITEAERNEELAALQAEA 234

Query: 1083 DQPLEEILKSYMNNTVSREVSPEGVQDVTEPVMK 1184
            D PL++ILK Y    VSRE SP+     ++  +K
Sbjct: 235  DLPLDDILKLYAKTKVSRESSPDSKDTFSKSDLK 268


>ref|XP_003518059.1| PREDICTED: uncharacterized protein LOC100794898 [Glycine max]
          Length = 2041

 Score =  267 bits (683), Expect = 4e-69
 Identities = 145/268 (54%), Positives = 178/268 (66%), Gaps = 3/268 (1%)
 Frame = +3

Query: 369  MASKGPRSKLDHDTRARRQKALEAPKEPPRPKAHWDHVLEEMVWLSKDFESERKWKLTQA 548
            MASKGPRS++DH++RA+RQKALEAP+EP RPK HWDHVLEEMVWLSKDFESERKWKL QA
Sbjct: 1    MASKGPRSRIDHESRAKRQKALEAPREPRRPKTHWDHVLEEMVWLSKDFESERKWKLAQA 60

Query: 549  KKVAVRASKSILEHATRGXXXXXXXXXXXXXVAANISKDVKKFWMKVEKLVLYKHQLELE 728
            KKVA+RASK +L+ ATRG             VA NISKDVKKFW K+EKLVLYKHQ+EL+
Sbjct: 61   KKVALRASKGMLDQATRGEKKMKEEEQRLRKVALNISKDVKKFWTKIEKLVLYKHQMELD 120

Query: 729  ERKKKALDKQLNFLLGQTERYSTMLAENLVDKPNSFKQAPVDSGIEQTCILDRERDKNGP 908
            E+KKKALDKQL FLLGQTERYSTMLAENLVD   S +    +  +   C  D     N P
Sbjct: 121  EKKKKALDKQLEFLLGQTERYSTMLAENLVDPYKSAENNSAEHHMSIQC-KDVHDVINEP 179

Query: 909  TESTPEPVNHLEKMESDDDYGLRSEDEPGDDEQTIDXXXXXXXXXXXXXXXXXXXXXXDQ 1088
             E+        +  ++D++Y ++ +DE  DDE+TI+                      D 
Sbjct: 180  KEADVVEYQS-DAADNDEEYDVQYDDESEDDERTIEQDEALITKEERQEELAALRDEMDL 238

Query: 1089 PLEEILKSYMNN---TVSREVSPEGVQD 1163
            P+EE+LK Y  +   +V +E SPE  +D
Sbjct: 239  PIEELLKRYAGDKGESVMKESSPEHSED 266


>emb|CBI30029.3| unnamed protein product [Vitis vinifera]
          Length = 1695

 Score =  264 bits (674), Expect = 4e-68
 Identities = 145/255 (56%), Positives = 169/255 (66%)
 Frame = +3

Query: 369  MASKGPRSKLDHDTRARRQKALEAPKEPPRPKAHWDHVLEEMVWLSKDFESERKWKLTQA 548
            MASKGPRSKLDH+TRARRQKALEAP+EP RPK HWDHVL+EMVWLSKDFESERKWKL QA
Sbjct: 1    MASKGPRSKLDHETRARRQKALEAPREPRRPKTHWDHVLDEMVWLSKDFESERKWKLAQA 60

Query: 549  KKVAVRASKSILEHATRGXXXXXXXXXXXXXVAANISKDVKKFWMKVEKLVLYKHQLELE 728
            KKVA+RASK +L+ ATRG             VA  ISKDVKKFW+K+EKLVLYKHQ+EL+
Sbjct: 61   KKVALRASKGMLDQATRGEKRVKEEEQRLRKVALTISKDVKKFWIKIEKLVLYKHQMELD 120

Query: 729  ERKKKALDKQLNFLLGQTERYSTMLAENLVDKPNSFKQAPVDSGIEQTCILDRERDKNGP 908
            E+KKKALDKQL FLLGQTERYSTMLAENL D   +++        E+  I  +E D  G 
Sbjct: 121  EKKKKALDKQLEFLLGQTERYSTMLAENLAD---TYQPTQQYLPKERCSIQYKEVDDPGF 177

Query: 909  TESTPEPVNHLEKMESDDDYGLRSEDEPGDDEQTIDXXXXXXXXXXXXXXXXXXXXXXDQ 1088
             E     +      + D+DY ++SE+E  DDE TI+                      D 
Sbjct: 178  KEVPQSGI-----ADVDEDYDMQSEEELEDDEHTIEEDEALITEEERQEELEALHNEIDL 232

Query: 1089 PLEEILKSYMNNTVS 1133
            PLEE+LK Y    VS
Sbjct: 233  PLEELLKRYAMKKVS 247


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