BLASTX nr result

ID: Dioscorea21_contig00005654 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00005654
         (416 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003533104.1| PREDICTED: UDP-arabinose 4-epimerase 1-like ...   154   9e-36
ref|XP_003546295.1| PREDICTED: UDP-arabinose 4-epimerase 1-like ...   153   2e-35
ref|XP_002300551.1| predicted protein [Populus trichocarpa] gi|2...   152   2e-35
ref|XP_002317687.1| predicted protein [Populus trichocarpa] gi|2...   150   1e-34
ref|XP_002264946.1| PREDICTED: UDP-arabinose 4-epimerase 1 [Viti...   147   7e-34

>ref|XP_003533104.1| PREDICTED: UDP-arabinose 4-epimerase 1-like [Glycine max]
          Length = 415

 Score =  154 bits (388), Expect = 9e-36
 Identities = 71/80 (88%), Positives = 75/80 (93%)
 Frame = -2

Query: 415 GTGKGRSVNEFVKACKKATGVDIKVEYLDRRPGDYAEVYSDPSKINRELNWTAQYTDLEK 236
           GTGKGRSV EFV ACKKATGVDIKV+YL RRPGDYAEVYSDPSKINRELNWTAQYTDLEK
Sbjct: 334 GTGKGRSVKEFVNACKKATGVDIKVDYLPRRPGDYAEVYSDPSKINRELNWTAQYTDLEK 393

Query: 235 SLRIAWQWQKNHRNGYGQSS 176
           SL++AW+WQK HRNGYG SS
Sbjct: 394 SLQVAWKWQKAHRNGYGISS 413


>ref|XP_003546295.1| PREDICTED: UDP-arabinose 4-epimerase 1-like [Glycine max]
          Length = 415

 Score =  153 bits (386), Expect = 2e-35
 Identities = 69/77 (89%), Positives = 74/77 (96%)
 Frame = -2

Query: 415 GTGKGRSVNEFVKACKKATGVDIKVEYLDRRPGDYAEVYSDPSKINRELNWTAQYTDLEK 236
           GTGKGRSV EFV ACKKATGVDIKV+YL RRPGDYAEVYSDPSKINRELNWTAQYTDLEK
Sbjct: 334 GTGKGRSVKEFVNACKKATGVDIKVDYLPRRPGDYAEVYSDPSKINRELNWTAQYTDLEK 393

Query: 235 SLRIAWQWQKNHRNGYG 185
           SL++AW+WQK+HRNGYG
Sbjct: 394 SLQVAWKWQKSHRNGYG 410


>ref|XP_002300551.1| predicted protein [Populus trichocarpa] gi|222847809|gb|EEE85356.1|
           predicted protein [Populus trichocarpa]
          Length = 417

 Score =  152 bits (385), Expect = 2e-35
 Identities = 69/84 (82%), Positives = 78/84 (92%)
 Frame = -2

Query: 415 GTGKGRSVNEFVKACKKATGVDIKVEYLDRRPGDYAEVYSDPSKINRELNWTAQYTDLEK 236
           GTG GRSVNEFV ACKKATGVDIKV+YL RRPGDYAEV+SDPSKINRELNWTAQYTDL+K
Sbjct: 334 GTGMGRSVNEFVHACKKATGVDIKVDYLPRRPGDYAEVFSDPSKINRELNWTAQYTDLQK 393

Query: 235 SLRIAWQWQKNHRNGYGQSSLMAS 164
           SL++AW+WQK+H+NGYG   +MAS
Sbjct: 394 SLQVAWRWQKSHQNGYGSPLVMAS 417


>ref|XP_002317687.1| predicted protein [Populus trichocarpa] gi|222860752|gb|EEE98299.1|
           predicted protein [Populus trichocarpa]
          Length = 417

 Score =  150 bits (379), Expect = 1e-34
 Identities = 69/84 (82%), Positives = 77/84 (91%)
 Frame = -2

Query: 415 GTGKGRSVNEFVKACKKATGVDIKVEYLDRRPGDYAEVYSDPSKINRELNWTAQYTDLEK 236
           GTGKGRSV EFVKACKKATGVDIKV+YL RRPGDYAEV+SDPSKI RELNWTAQYTDL+K
Sbjct: 334 GTGKGRSVKEFVKACKKATGVDIKVDYLPRRPGDYAEVFSDPSKIYRELNWTAQYTDLQK 393

Query: 235 SLRIAWQWQKNHRNGYGQSSLMAS 164
           SL+ AW+WQK+H+NGYG   +MAS
Sbjct: 394 SLQTAWRWQKSHQNGYGSPLVMAS 417


>ref|XP_002264946.1| PREDICTED: UDP-arabinose 4-epimerase 1 [Vitis vinifera]
           gi|296087462|emb|CBI34051.3| unnamed protein product
           [Vitis vinifera]
          Length = 417

 Score =  147 bits (372), Expect = 7e-34
 Identities = 67/77 (87%), Positives = 74/77 (96%)
 Frame = -2

Query: 415 GTGKGRSVNEFVKACKKATGVDIKVEYLDRRPGDYAEVYSDPSKINRELNWTAQYTDLEK 236
           GTGKGRSV EFV+ACKKATGVDIKVEYLDRRPGDYAEVYSDPSKI RELNWTAQYT+L++
Sbjct: 334 GTGKGRSVKEFVEACKKATGVDIKVEYLDRRPGDYAEVYSDPSKILRELNWTAQYTNLQE 393

Query: 235 SLRIAWQWQKNHRNGYG 185
           SL+ AW+WQK+HRNGYG
Sbjct: 394 SLQTAWRWQKSHRNGYG 410


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