BLASTX nr result

ID: Dioscorea21_contig00005653 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00005653
         (308 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003546295.1| PREDICTED: UDP-arabinose 4-epimerase 1-like ...   196   2e-48
ref|XP_003533104.1| PREDICTED: UDP-arabinose 4-epimerase 1-like ...   195   3e-48
ref|XP_002264946.1| PREDICTED: UDP-arabinose 4-epimerase 1 [Viti...   191   4e-47
ref|XP_002300551.1| predicted protein [Populus trichocarpa] gi|2...   189   2e-46
ref|XP_002307918.1| predicted protein [Populus trichocarpa] gi|2...   188   3e-46

>ref|XP_003546295.1| PREDICTED: UDP-arabinose 4-epimerase 1-like [Glycine max]
          Length = 415

 Score =  196 bits (498), Expect = 2e-48
 Identities = 92/102 (90%), Positives = 97/102 (95%)
 Frame = -3

Query: 306 DVTDLVDAHVKALAKAQPKKVGIYNVGTGKGRSVNEFVKACKKATGVDIKVEYLDRRPGD 127
           DVTDLVDAHVKAL KAQP KVGIYNVGTGKGRSV EFV ACKKATGVDIKV+YL RRPGD
Sbjct: 308 DVTDLVDAHVKALEKAQPGKVGIYNVGTGKGRSVKEFVNACKKATGVDIKVDYLPRRPGD 367

Query: 126 YAEVYSDPSKINRELNWTAQYTDLEKSLRIAWQWQKNHRNGY 1
           YAEVYSDPSKINRELNWTAQYTDLEKSL++AW+WQK+HRNGY
Sbjct: 368 YAEVYSDPSKINRELNWTAQYTDLEKSLQVAWKWQKSHRNGY 409


>ref|XP_003533104.1| PREDICTED: UDP-arabinose 4-epimerase 1-like [Glycine max]
          Length = 415

 Score =  195 bits (496), Expect = 3e-48
 Identities = 92/102 (90%), Positives = 96/102 (94%)
 Frame = -3

Query: 306 DVTDLVDAHVKALAKAQPKKVGIYNVGTGKGRSVNEFVKACKKATGVDIKVEYLDRRPGD 127
           DVTDLVDAHVKAL KAQP KVGIYNVGTGKGRSV EFV ACKKATGVDIKV+YL RRPGD
Sbjct: 308 DVTDLVDAHVKALEKAQPAKVGIYNVGTGKGRSVKEFVNACKKATGVDIKVDYLPRRPGD 367

Query: 126 YAEVYSDPSKINRELNWTAQYTDLEKSLRIAWQWQKNHRNGY 1
           YAEVYSDPSKINRELNWTAQYTDLEKSL++AW+WQK HRNGY
Sbjct: 368 YAEVYSDPSKINRELNWTAQYTDLEKSLQVAWKWQKAHRNGY 409


>ref|XP_002264946.1| PREDICTED: UDP-arabinose 4-epimerase 1 [Vitis vinifera]
           gi|296087462|emb|CBI34051.3| unnamed protein product
           [Vitis vinifera]
          Length = 417

 Score =  191 bits (486), Expect = 4e-47
 Identities = 90/102 (88%), Positives = 98/102 (96%)
 Frame = -3

Query: 306 DVTDLVDAHVKALAKAQPKKVGIYNVGTGKGRSVNEFVKACKKATGVDIKVEYLDRRPGD 127
           DVTDLVDAHVKALA A+PKKVGIYNVGTGKGRSV EFV+ACKKATGVDIKVEYLDRRPGD
Sbjct: 308 DVTDLVDAHVKALAHAKPKKVGIYNVGTGKGRSVKEFVEACKKATGVDIKVEYLDRRPGD 367

Query: 126 YAEVYSDPSKINRELNWTAQYTDLEKSLRIAWQWQKNHRNGY 1
           YAEVYSDPSKI RELNWTAQYT+L++SL+ AW+WQK+HRNGY
Sbjct: 368 YAEVYSDPSKILRELNWTAQYTNLQESLQTAWRWQKSHRNGY 409


>ref|XP_002300551.1| predicted protein [Populus trichocarpa] gi|222847809|gb|EEE85356.1|
           predicted protein [Populus trichocarpa]
          Length = 417

 Score =  189 bits (481), Expect = 2e-46
 Identities = 88/102 (86%), Positives = 96/102 (94%)
 Frame = -3

Query: 306 DVTDLVDAHVKALAKAQPKKVGIYNVGTGKGRSVNEFVKACKKATGVDIKVEYLDRRPGD 127
           DVTDLVDAHVKAL KA P KVGIYNVGTG GRSVNEFV ACKKATGVDIKV+YL RRPGD
Sbjct: 308 DVTDLVDAHVKALEKAMPGKVGIYNVGTGMGRSVNEFVHACKKATGVDIKVDYLPRRPGD 367

Query: 126 YAEVYSDPSKINRELNWTAQYTDLEKSLRIAWQWQKNHRNGY 1
           YAEV+SDPSKINRELNWTAQYTDL+KSL++AW+WQK+H+NGY
Sbjct: 368 YAEVFSDPSKINRELNWTAQYTDLQKSLQVAWRWQKSHQNGY 409


>ref|XP_002307918.1| predicted protein [Populus trichocarpa] gi|222853894|gb|EEE91441.1|
           predicted protein [Populus trichocarpa]
          Length = 390

 Score =  188 bits (478), Expect = 3e-46
 Identities = 88/102 (86%), Positives = 97/102 (95%)
 Frame = -3

Query: 306 DVTDLVDAHVKALAKAQPKKVGIYNVGTGKGRSVNEFVKACKKATGVDIKVEYLDRRPGD 127
           DVTDLVDAHVKALA A+P+KVGIYNVGTGKGRSV EFV ACKKATGVDIKVEYLDRRPGD
Sbjct: 289 DVTDLVDAHVKALAHAKPRKVGIYNVGTGKGRSVKEFVDACKKATGVDIKVEYLDRRPGD 348

Query: 126 YAEVYSDPSKINRELNWTAQYTDLEKSLRIAWQWQKNHRNGY 1
           YAEV+SDPSKI +EL+WTAQYTDL+KSL+IAW+WQK+H NGY
Sbjct: 349 YAEVFSDPSKIKQELSWTAQYTDLQKSLQIAWKWQKSHLNGY 390


Top