BLASTX nr result

ID: Dioscorea21_contig00005612 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00005612
         (372 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACF06437.1| ribosomal L28-like protein [Elaeis guineensis]          75   6e-12
gb|ACF06504.1| 60S ribosomal protein L28 [Elaeis guineensis]           74   2e-11
gb|AEO32764.1| hypothetical protein [Amblyomma maculatum]              73   2e-11
ref|XP_002281233.1| PREDICTED: 60S ribosomal protein L28-2 [Viti...    72   4e-11
gb|ABD65459.1| putative ribosomal protein L28 [Gossypium hirsutum]     72   6e-11

>gb|ACF06437.1| ribosomal L28-like protein [Elaeis guineensis]
          Length = 148

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 36/40 (90%), Positives = 40/40 (100%)
 Frame = -3

Query: 370 TDNFYRPDLTKAALARLSAVHRSLKVSKSGVKKRNRQALK 251
           TDN+YRPDLTKAALARLSAVHRSLKV+KSGVKKRNRQA++
Sbjct: 106 TDNYYRPDLTKAALARLSAVHRSLKVAKSGVKKRNRQAVQ 145


>gb|ACF06504.1| 60S ribosomal protein L28 [Elaeis guineensis]
          Length = 148

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 35/40 (87%), Positives = 39/40 (97%)
 Frame = -3

Query: 370 TDNFYRPDLTKAALARLSAVHRSLKVSKSGVKKRNRQALK 251
           T+N+YRPDLTKAALARLSAVHRSLKV+KSG KKRNRQA+K
Sbjct: 106 TENYYRPDLTKAALARLSAVHRSLKVAKSGAKKRNRQAVK 145


>gb|AEO32764.1| hypothetical protein [Amblyomma maculatum]
          Length = 168

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 34/41 (82%), Positives = 40/41 (97%)
 Frame = -3

Query: 370 TDNFYRPDLTKAALARLSAVHRSLKVSKSGVKKRNRQALKK 248
           T+N+YRPDLTKAALARLSAVHRSL+V+KSG KKRNRQA++K
Sbjct: 128 TENYYRPDLTKAALARLSAVHRSLRVAKSGAKKRNRQAVRK 168


>ref|XP_002281233.1| PREDICTED: 60S ribosomal protein L28-2 [Vitis vinifera]
           gi|147863559|emb|CAN84039.1| hypothetical protein
           VITISV_024169 [Vitis vinifera]
           gi|297743118|emb|CBI35985.3| unnamed protein product
           [Vitis vinifera]
          Length = 149

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 35/39 (89%), Positives = 38/39 (97%)
 Frame = -3

Query: 367 DNFYRPDLTKAALARLSAVHRSLKVSKSGVKKRNRQALK 251
           DN+YRPDL KAALARLSAVHRSLKV+KSGVKKRNRQA+K
Sbjct: 106 DNYYRPDLKKAALARLSAVHRSLKVAKSGVKKRNRQAVK 144


>gb|ABD65459.1| putative ribosomal protein L28 [Gossypium hirsutum]
          Length = 150

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 35/38 (92%), Positives = 38/38 (100%)
 Frame = -3

Query: 370 TDNFYRPDLTKAALARLSAVHRSLKVSKSGVKKRNRQA 257
           TDN+YRPDLTKAALARLSAV+RSLKV+KSGVKKRNRQA
Sbjct: 106 TDNYYRPDLTKAALARLSAVNRSLKVAKSGVKKRNRQA 143


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