BLASTX nr result
ID: Dioscorea21_contig00005604
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00005604
(524 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AFW80636.1| hypothetical protein ZEAMMB73_312807 [Zea mays] 100 1e-33
ref|XP_003561987.1| PREDICTED: Werner Syndrome-like exonuclease-... 108 4e-32
ref|NP_001042816.1| Os01g0300000 [Oryza sativa Japonica Group] g... 106 7e-32
ref|XP_002271430.1| PREDICTED: Werner Syndrome-like exonuclease-... 83 5e-30
ref|XP_002457724.1| hypothetical protein SORBIDRAFT_03g012385 [S... 81 7e-28
>gb|AFW80636.1| hypothetical protein ZEAMMB73_312807 [Zea mays]
Length = 214
Score = 100 bits (248), Expect(2) = 1e-33
Identities = 51/95 (53%), Positives = 62/95 (65%), Gaps = 1/95 (1%)
Frame = +3
Query: 198 GVGIMADVSKLFDDYDLQCGNPVDLDPLCCSYLGL-DNRRSLGLKGYAKEILGLTMVKPR 374
G+G+ D +KL DY L C +PV+L+ C YLG LGLKGYA+E+LGL M KPR
Sbjct: 116 GIGVGEDAAKLATDYGLTCASPVELESRCNDYLGYYTGGPRLGLKGYAREVLGLVMEKPR 175
Query: 375 RVTLSNWESRVLSYCQIEYACIDACASYYLGCRLL 479
VT+SNWE L QI YACIDA SY LG ++L
Sbjct: 176 GVTMSNWEKHDLEDAQIRYACIDAYVSYKLGEKVL 210
Score = 68.6 bits (166), Expect(2) = 1e-33
Identities = 28/54 (51%), Positives = 41/54 (75%)
Frame = +1
Query: 1 DCEWRPNFTAGSSNLVATLQLCFSNQCLILQLQYMDSIPRILRDFLSDPSISFV 162
DCEW+PN+ + +++ VA LQLC ++CL+LQL Y+D IP +R FL+DP + FV
Sbjct: 62 DCEWKPNYRSWTTSKVAILQLCAGDRCLVLQLFYVDRIPASIRSFLADPDVFFV 115
>ref|XP_003561987.1| PREDICTED: Werner Syndrome-like exonuclease-like [Brachypodium
distachyon]
Length = 199
Score = 108 bits (269), Expect(2) = 4e-32
Identities = 55/96 (57%), Positives = 66/96 (68%), Gaps = 2/96 (2%)
Frame = +3
Query: 198 GVGIMADVSKLFDDYDLQCGNPVDLDPLCCSYLGLDN--RRSLGLKGYAKEILGLTMVKP 371
G+G+ D KL DY + C PVDL+ C +LG+ + R LGLKGY +EILGLTM KP
Sbjct: 102 GIGVGEDCGKLAVDYGIVCAAPVDLEDRCNQHLGIRSLFRNRLGLKGYTREILGLTMAKP 161
Query: 372 RRVTLSNWESRVLSYCQIEYACIDACASYYLGCRLL 479
R VT+SNWE+R LS Q+ YACIDA SY LG RLL
Sbjct: 162 RHVTMSNWETRDLSVAQVVYACIDAYVSYKLGERLL 197
Score = 55.1 bits (131), Expect(2) = 4e-32
Identities = 25/54 (46%), Positives = 33/54 (61%)
Frame = +1
Query: 1 DCEWRPNFTAGSSNLVATLQLCFSNQCLILQLQYMDSIPRILRDFLSDPSISFV 162
DCEW+P + VA LQLC CLILQ+ Y+D +P +R FL DP++ V
Sbjct: 48 DCEWKPCDHLPVPSKVAILQLCVGTSCLILQMFYVDRVPAGIRSFLGDPTVRCV 101
>ref|NP_001042816.1| Os01g0300000 [Oryza sativa Japonica Group]
gi|14495214|dbj|BAB60933.1| unknown protein [Oryza
sativa Japonica Group] gi|15623802|dbj|BAB67862.1|
unknown protein [Oryza sativa Japonica Group]
gi|113532347|dbj|BAF04730.1| Os01g0300000 [Oryza sativa
Japonica Group] gi|125525536|gb|EAY73650.1| hypothetical
protein OsI_01539 [Oryza sativa Indica Group]
gi|125570051|gb|EAZ11566.1| hypothetical protein
OsJ_01433 [Oryza sativa Japonica Group]
gi|215686527|dbj|BAG88780.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 201
Score = 106 bits (265), Expect(2) = 7e-32
Identities = 54/96 (56%), Positives = 66/96 (68%), Gaps = 1/96 (1%)
Frame = +3
Query: 198 GVGIMADVSKLFDDYDLQCGNPVDLDPLCCSYLGL-DNRRSLGLKGYAKEILGLTMVKPR 374
G+G+ D +KL DY + C PVDL+ C LGL R LGLKGYA+E+LG+ M KPR
Sbjct: 105 GIGVGEDAAKLEADYGVWCAAPVDLEDACNRRLGLVGTGRRLGLKGYAREVLGMAMEKPR 164
Query: 375 RVTLSNWESRVLSYCQIEYACIDACASYYLGCRLLS 482
RVT+SNWE R L Q+EYACIDA SY LG R+L+
Sbjct: 165 RVTMSNWEKRELDPAQVEYACIDAYVSYKLGERVLA 200
Score = 55.8 bits (133), Expect(2) = 7e-32
Identities = 25/55 (45%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Frame = +1
Query: 1 DCEWRPNFTAGSSNLVATLQLCFSNQ-CLILQLQYMDSIPRILRDFLSDPSISFV 162
DCEW+PN + ++ VA LQLC + CL+LQL Y + +P + D L DPS+ V
Sbjct: 50 DCEWKPNHVSWKTSKVAVLQLCAGERFCLVLQLFYANRVPPAVADLLGDPSVRLV 104
>ref|XP_002271430.1| PREDICTED: Werner Syndrome-like exonuclease-like [Vitis vinifera]
Length = 196
Score = 82.8 bits (203), Expect(2) = 5e-30
Identities = 46/96 (47%), Positives = 59/96 (61%)
Frame = +3
Query: 198 GVGIMADVSKLFDDYDLQCGNPVDLDPLCCSYLGLDNRRSLGLKGYAKEILGLTMVKPRR 377
GV + +D KL D+Y+L C ++ L CS+ R GLK A +I+GL M KP
Sbjct: 100 GVEVESDAMKLRDEYELDCQETSNIRALACSFWPNRWYRRPGLKDLAFQIVGLLMQKPIH 159
Query: 378 VTLSNWESRVLSYCQIEYACIDACASYYLGCRLLSE 485
V SNWE+R+LS Q+EYA IDA ASY +G RLL E
Sbjct: 160 VCSSNWEARILSNEQVEYASIDAYASYRIGHRLLKE 195
Score = 73.6 bits (179), Expect(2) = 5e-30
Identities = 31/54 (57%), Positives = 42/54 (77%)
Frame = +1
Query: 1 DCEWRPNFTAGSSNLVATLQLCFSNQCLILQLQYMDSIPRILRDFLSDPSISFV 162
DCEW P F +G+SN +ATLQLC +CLILQL Y D IP+ ++FLS+P+++FV
Sbjct: 46 DCEWSPTFLSGTSNRIATLQLCVDTKCLILQLFYTDYIPQSFKNFLSNPAVTFV 99
>ref|XP_002457724.1| hypothetical protein SORBIDRAFT_03g012385 [Sorghum bicolor]
gi|241929699|gb|EES02844.1| hypothetical protein
SORBIDRAFT_03g012385 [Sorghum bicolor]
Length = 183
Score = 81.3 bits (199), Expect(2) = 7e-28
Identities = 46/94 (48%), Positives = 56/94 (59%), Gaps = 4/94 (4%)
Frame = +3
Query: 198 GVGIMADVSKLFDDYDLQCGNPVDLDPLCCSYLGLDNR--RSLGLKGYAKEILGLTMVKP 371
G+G+ DV+KL DY L C VDL+ C YLG R LGLKGYA+E+LGL M KP
Sbjct: 89 GIGVGEDVAKLDADYGLTCAAHVDLESRCNDYLGRYTGVGRRLGLKGYAEEVLGLFMEKP 148
Query: 372 RRVTLSNWESRVLSYCQIEYA--CIDACASYYLG 467
R VT+SNWE L QI Y + A ++Y G
Sbjct: 149 RGVTMSNWEKHDLEEAQIRYKWHAVLAFGNHYFG 182
Score = 67.8 bits (164), Expect(2) = 7e-28
Identities = 27/54 (50%), Positives = 40/54 (74%)
Frame = +1
Query: 1 DCEWRPNFTAGSSNLVATLQLCFSNQCLILQLQYMDSIPRILRDFLSDPSISFV 162
DCEW+PN+ + +++ VA LQLC +CL+LQL Y+D +P +R FL+DP + FV
Sbjct: 35 DCEWKPNYRSWTTSKVAILQLCAGTRCLVLQLLYVDRVPASVRSFLADPDVLFV 88