BLASTX nr result

ID: Dioscorea21_contig00005590 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00005590
         (583 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004156647.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin...   163   2e-38
ref|XP_004137939.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin...   163   2e-38
ref|XP_003552169.1| PREDICTED: E3 ubiquitin-protein ligase UBR3-...   163   2e-38
ref|XP_003530206.1| PREDICTED: E3 ubiquitin-protein ligase UBR3-...   162   5e-38
ref|XP_002270537.2| PREDICTED: E3 ubiquitin-protein ligase UBR2-...   159   3e-37

>ref|XP_004156647.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
           UBR1-like [Cucumis sativus]
          Length = 2089

 Score =  163 bits (412), Expect = 2e-38
 Identities = 78/139 (56%), Positives = 98/139 (70%)
 Frame = +1

Query: 166 ILKRLAQRGVPQEYLDQCQPGLVAFVRENKSVLPELVCCILPSVRDMSVAWRKDKPETAI 345
           IL+RLA  GVP E LDQ   GLV FV++NK ++PELV  ILP+  ++    R   P    
Sbjct: 21  ILRRLAVLGVPDELLDQLFRGLVTFVKDNKFLIPELVSAILPTDVEVVEVIRDAIPGAKK 80

Query: 346 EQRRAKLKALFDESLLWMQWLMFEGEPHTFLKNLAEKSSGQRAVCGAVWGQKELAYKCRT 525
                 +KA F ES++W+QWLMFE EP   LKNL++ S GQR VCGAVWG  ++AY+CRT
Sbjct: 81  SLAGPTMKANFRESMMWLQWLMFESEPAYALKNLSKMSVGQRGVCGAVWGHNDIAYRCRT 140

Query: 526 CEYDPTCAICVPCFQNGDH 582
           CE+DPTCAICVPCFQ+G+H
Sbjct: 141 CEHDPTCAICVPCFQSGNH 159


>ref|XP_004137939.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
           UBR1-like [Cucumis sativus]
          Length = 2099

 Score =  163 bits (412), Expect = 2e-38
 Identities = 78/139 (56%), Positives = 98/139 (70%)
 Frame = +1

Query: 166 ILKRLAQRGVPQEYLDQCQPGLVAFVRENKSVLPELVCCILPSVRDMSVAWRKDKPETAI 345
           IL+RLA  GVP E LDQ   GLV FV++NK ++PELV  ILP+  ++    R   P    
Sbjct: 21  ILRRLAVLGVPDELLDQLFRGLVTFVKDNKFLIPELVSAILPTDVEVVEVIRDAIPGAKK 80

Query: 346 EQRRAKLKALFDESLLWMQWLMFEGEPHTFLKNLAEKSSGQRAVCGAVWGQKELAYKCRT 525
                 +KA F ES++W+QWLMFE EP   LKNL++ S GQR VCGAVWG  ++AY+CRT
Sbjct: 81  SLAGPTMKANFRESMMWLQWLMFESEPAYALKNLSKMSVGQRGVCGAVWGHNDIAYRCRT 140

Query: 526 CEYDPTCAICVPCFQNGDH 582
           CE+DPTCAICVPCFQ+G+H
Sbjct: 141 CEHDPTCAICVPCFQSGNH 159


>ref|XP_003552169.1| PREDICTED: E3 ubiquitin-protein ligase UBR3-like [Glycine max]
          Length = 2036

 Score =  163 bits (412), Expect = 2e-38
 Identities = 75/141 (53%), Positives = 107/141 (75%), Gaps = 2/141 (1%)
 Frame = +1

Query: 166 ILKRLAQRGVPQEYLDQCQPGLVAFVRENKSVLPELVCCILPSVRDMSVAWRK--DKPET 339
           +++RLAQ GVP+E LDQ  PGLVAFV++ ++++PELV  ILP+  +++ AW       +T
Sbjct: 18  VVRRLAQFGVPEEQLDQ--PGLVAFVKDKRALIPELVSVILPTDAEVADAWEAKFSSKKT 75

Query: 340 AIEQRRAKLKALFDESLLWMQWLMFEGEPHTFLKNLAEKSSGQRAVCGAVWGQKELAYKC 519
           A+      +K  F+ES++W+QWLMFEG+P   L+ L++ S GQR VCG+VWG  ++AY+C
Sbjct: 76  AVG---VIMKKRFNESMVWLQWLMFEGDPGGALRRLSKMSVGQRGVCGSVWGNSDIAYRC 132

Query: 520 RTCEYDPTCAICVPCFQNGDH 582
           RTCE+DPTCAICVPCF+NG+H
Sbjct: 133 RTCEHDPTCAICVPCFENGNH 153


>ref|XP_003530206.1| PREDICTED: E3 ubiquitin-protein ligase UBR3-like [Glycine max]
          Length = 2037

 Score =  162 bits (409), Expect = 5e-38
 Identities = 74/141 (52%), Positives = 107/141 (75%), Gaps = 2/141 (1%)
 Frame = +1

Query: 166 ILKRLAQRGVPQEYLDQCQPGLVAFVRENKSVLPELVCCILPSVRDMSVAWRK--DKPET 339
           +++RLAQ GVP+E LDQ  PGLVAFV++ ++++PELV  ILP+  +++ AW+      +T
Sbjct: 18  VVRRLAQFGVPEEQLDQ--PGLVAFVKDKRALIPELVSVILPTDAEVADAWQAKLSSKKT 75

Query: 340 AIEQRRAKLKALFDESLLWMQWLMFEGEPHTFLKNLAEKSSGQRAVCGAVWGQKELAYKC 519
           A+      +K  F+ES+ W+QWL+FEG+P   L+ L++ S GQR VCG+VWG  ++AY+C
Sbjct: 76  AVG---VIMKKRFNESMAWLQWLIFEGDPGGALRRLSKMSDGQRGVCGSVWGNSDIAYRC 132

Query: 520 RTCEYDPTCAICVPCFQNGDH 582
           RTCE+DPTCAICVPCF+NG+H
Sbjct: 133 RTCEHDPTCAICVPCFENGNH 153


>ref|XP_002270537.2| PREDICTED: E3 ubiquitin-protein ligase UBR2-like [Vitis vinifera]
          Length = 2048

 Score =  159 bits (402), Expect = 3e-37
 Identities = 72/139 (51%), Positives = 104/139 (74%)
 Frame = +1

Query: 166 ILKRLAQRGVPQEYLDQCQPGLVAFVRENKSVLPELVCCILPSVRDMSVAWRKDKPETAI 345
           I++RL+ +GVP+E+L++ +PGLVA+V+ENK  +PELV  ILP+  ++  A+++ K  +  
Sbjct: 18  IVQRLSLQGVPEEHLERLEPGLVAYVKENKFRVPELVSAILPTEEEVLEAYKECKASSKE 77

Query: 346 EQRRAKLKALFDESLLWMQWLMFEGEPHTFLKNLAEKSSGQRAVCGAVWGQKELAYKCRT 525
           +     +   F ES+  +QWLMF GEP + L  LA+ S+GQR VCG+VWG  ++AY+CRT
Sbjct: 78  DLVSPTMTEQFRESMRLLQWLMFYGEPLSALNKLAKISTGQRGVCGSVWGHNDIAYRCRT 137

Query: 526 CEYDPTCAICVPCFQNGDH 582
           CE+DPTCAICVPCFQNG+H
Sbjct: 138 CEHDPTCAICVPCFQNGNH 156


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