BLASTX nr result

ID: Dioscorea21_contig00005572 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00005572
         (812 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002460486.1| hypothetical protein SORBIDRAFT_02g029140 [S...   438   e-121
tpg|DAA62200.1| TPA: cyclin-C [Zea mays]                              436   e-120
gb|ACG44793.1| cyclin-C [Zea mays]                                    433   e-119
gb|ACF78432.1| unknown [Zea mays] gi|194703686|gb|ACF85927.1| un...   433   e-119
ref|XP_003578377.1| PREDICTED: cyclin-C1-1-like [Brachypodium di...   424   e-116

>ref|XP_002460486.1| hypothetical protein SORBIDRAFT_02g029140 [Sorghum bicolor]
           gi|241923863|gb|EER97007.1| hypothetical protein
           SORBIDRAFT_02g029140 [Sorghum bicolor]
          Length = 257

 Score =  438 bits (1126), Expect = e-121
 Identities = 216/261 (82%), Positives = 238/261 (91%), Gaps = 1/261 (0%)
 Frame = -2

Query: 790 MAANFWASSHCKQLLDPDDVGVLQPLDKERGLTQEEFKLIKIHMTNHIWKLAQQVKVRQR 611
           MAANFW SSHCKQLLDPDDV ++   D+ERG+T EEF+LIKIHM+ HIW+LAQQVKVRQR
Sbjct: 1   MAANFWTSSHCKQLLDPDDVDLVPAADRERGITPEEFRLIKIHMSFHIWRLAQQVKVRQR 60

Query: 610 VIATAVTYFRRVYTRKSMTEYDPRLVAPTCLYLASKAEESTVQARLLVFYIKKMC-PDEK 434
           VIATAVTYFRRVYTRKSM++YDPRLVAPTCLYLASK EESTVQARLLVFYIKKMC  D+K
Sbjct: 61  VIATAVTYFRRVYTRKSMSDYDPRLVAPTCLYLASKVEESTVQARLLVFYIKKMCGSDDK 120

Query: 433 YRFEIKDILEMEMKLLEALDYYLIVFHPYRALLQLLQDAGMTDLTHYAWGLVNDTYKMDL 254
           YRFEIKDILEMEMKLLEALDYYL+VFHPYR LLQLLQDAG+TDLT +AWGLVNDTYKMDL
Sbjct: 121 YRFEIKDILEMEMKLLEALDYYLVVFHPYRPLLQLLQDAGITDLTQFAWGLVNDTYKMDL 180

Query: 253 ILIYPPYMIALACIYIASVLKDKETTAWFEELRVDMNVVKNIAIEILDFYDYYKGDTCKG 74
           ILIYPPYMIALACIYIASVLKDK+TTAWFEELRVDMN+VKNI++EILDFYD YK D    
Sbjct: 181 ILIYPPYMIALACIYIASVLKDKDTTAWFEELRVDMNIVKNISMEILDFYDTYKID---- 236

Query: 73  EPARGIPEERINAALNKLATK 11
            P RGIPE++I++ +NKL  K
Sbjct: 237 -PQRGIPEDKISSVMNKLPAK 256


>tpg|DAA62200.1| TPA: cyclin-C [Zea mays]
          Length = 297

 Score =  436 bits (1120), Expect = e-120
 Identities = 214/265 (80%), Positives = 238/265 (89%), Gaps = 1/265 (0%)
 Frame = -2

Query: 802 RSSHMAANFWASSHCKQLLDPDDVGVLQPLDKERGLTQEEFKLIKIHMTNHIWKLAQQVK 623
           R S MAANFW SSHCKQLLDP+DV ++   D+ERG+T EEF+LIKIHM+ HIW+LAQQVK
Sbjct: 37  RGSTMAANFWTSSHCKQLLDPEDVDLVPAADRERGITPEEFRLIKIHMSFHIWRLAQQVK 96

Query: 622 VRQRVIATAVTYFRRVYTRKSMTEYDPRLVAPTCLYLASKAEESTVQARLLVFYIKKMC- 446
           VRQRV+ATA+ YFRRVYTRKSM++YDPRLVAPTCLYLASK EESTVQARLLVFYIKKMC 
Sbjct: 97  VRQRVVATAIAYFRRVYTRKSMSDYDPRLVAPTCLYLASKVEESTVQARLLVFYIKKMCG 156

Query: 445 PDEKYRFEIKDILEMEMKLLEALDYYLIVFHPYRALLQLLQDAGMTDLTHYAWGLVNDTY 266
            D+KYRFEIKDILEMEMKLLEALDYYL+VFHPYR LLQLLQDAG+TDLT +AWGLVNDTY
Sbjct: 157 SDDKYRFEIKDILEMEMKLLEALDYYLVVFHPYRPLLQLLQDAGITDLTQFAWGLVNDTY 216

Query: 265 KMDLILIYPPYMIALACIYIASVLKDKETTAWFEELRVDMNVVKNIAIEILDFYDYYKGD 86
           KMDLILIYPPYMIALACIYIASVLKDK+TTAWFEELRVDMN+VKNI++EILDFYD YK D
Sbjct: 217 KMDLILIYPPYMIALACIYIASVLKDKDTTAWFEELRVDMNIVKNISMEILDFYDTYKID 276

Query: 85  TCKGEPARGIPEERINAALNKLATK 11
                P RGIPE++I+  +NKL  K
Sbjct: 277 -----PQRGIPEDKISPVMNKLPAK 296


>gb|ACG44793.1| cyclin-C [Zea mays]
          Length = 257

 Score =  433 bits (1114), Expect = e-119
 Identities = 212/261 (81%), Positives = 237/261 (90%), Gaps = 1/261 (0%)
 Frame = -2

Query: 790 MAANFWASSHCKQLLDPDDVGVLQPLDKERGLTQEEFKLIKIHMTNHIWKLAQQVKVRQR 611
           MAANFW SSHCKQLLDP+DV ++   D+ERG+T EEF+LIKIHM+ HIW+LAQQVKVRQR
Sbjct: 1   MAANFWTSSHCKQLLDPEDVDLVPAADRERGITPEEFRLIKIHMSFHIWRLAQQVKVRQR 60

Query: 610 VIATAVTYFRRVYTRKSMTEYDPRLVAPTCLYLASKAEESTVQARLLVFYIKKMC-PDEK 434
           V+ATA++YFRRVYTRKSM++YDPRLVAPTCLYLASK EESTVQARLLVFYIKKMC  D+K
Sbjct: 61  VVATAISYFRRVYTRKSMSDYDPRLVAPTCLYLASKVEESTVQARLLVFYIKKMCGSDDK 120

Query: 433 YRFEIKDILEMEMKLLEALDYYLIVFHPYRALLQLLQDAGMTDLTHYAWGLVNDTYKMDL 254
           YRFEIKDILEMEMKLLEALDYYL+VFHPYR LLQLLQDAG+TDLT +AWGLVNDTYKMDL
Sbjct: 121 YRFEIKDILEMEMKLLEALDYYLVVFHPYRPLLQLLQDAGITDLTQFAWGLVNDTYKMDL 180

Query: 253 ILIYPPYMIALACIYIASVLKDKETTAWFEELRVDMNVVKNIAIEILDFYDYYKGDTCKG 74
           ILIYPPYMIALACIYIASVLKDK+TTAWFEELRVDMN+VKNI++EILDFYD YK D    
Sbjct: 181 ILIYPPYMIALACIYIASVLKDKDTTAWFEELRVDMNIVKNISMEILDFYDTYKID---- 236

Query: 73  EPARGIPEERINAALNKLATK 11
            P RGIPE++I+  +NKL  K
Sbjct: 237 -PQRGIPEDKISPVMNKLPAK 256


>gb|ACF78432.1| unknown [Zea mays] gi|194703686|gb|ACF85927.1| unknown [Zea mays]
          Length = 257

 Score =  433 bits (1113), Expect = e-119
 Identities = 212/261 (81%), Positives = 236/261 (90%), Gaps = 1/261 (0%)
 Frame = -2

Query: 790 MAANFWASSHCKQLLDPDDVGVLQPLDKERGLTQEEFKLIKIHMTNHIWKLAQQVKVRQR 611
           MAANFW SSHCKQLLDP+DV ++   D+ERG+T EEF+LIKIHM+ HIW+LAQQVKVRQR
Sbjct: 1   MAANFWTSSHCKQLLDPEDVDLVPAADRERGITPEEFRLIKIHMSFHIWRLAQQVKVRQR 60

Query: 610 VIATAVTYFRRVYTRKSMTEYDPRLVAPTCLYLASKAEESTVQARLLVFYIKKMC-PDEK 434
           V+ATA+ YFRRVYTRKSM++YDPRLVAPTCLYLASK EESTVQARLLVFYIKKMC  D+K
Sbjct: 61  VVATAIAYFRRVYTRKSMSDYDPRLVAPTCLYLASKVEESTVQARLLVFYIKKMCGSDDK 120

Query: 433 YRFEIKDILEMEMKLLEALDYYLIVFHPYRALLQLLQDAGMTDLTHYAWGLVNDTYKMDL 254
           YRFEIKDILEMEMKLLEALDYYL+VFHPYR LLQLLQDAG+TDLT +AWGLVNDTYKMDL
Sbjct: 121 YRFEIKDILEMEMKLLEALDYYLVVFHPYRPLLQLLQDAGITDLTQFAWGLVNDTYKMDL 180

Query: 253 ILIYPPYMIALACIYIASVLKDKETTAWFEELRVDMNVVKNIAIEILDFYDYYKGDTCKG 74
           ILIYPPYMIALACIYIASVLKDK+TTAWFEELRVDMN+VKNI++EILDFYD YK D    
Sbjct: 181 ILIYPPYMIALACIYIASVLKDKDTTAWFEELRVDMNIVKNISMEILDFYDTYKID---- 236

Query: 73  EPARGIPEERINAALNKLATK 11
            P RGIPE++I+  +NKL  K
Sbjct: 237 -PQRGIPEDKISPVMNKLPAK 256


>ref|XP_003578377.1| PREDICTED: cyclin-C1-1-like [Brachypodium distachyon]
          Length = 257

 Score =  424 bits (1089), Expect = e-116
 Identities = 208/261 (79%), Positives = 233/261 (89%), Gaps = 1/261 (0%)
 Frame = -2

Query: 790 MAANFWASSHCKQLLDPDDVGVLQPLDKERGLTQEEFKLIKIHMTNHIWKLAQQVKVRQR 611
           MAANFWASSH KQLLDP++V V+   D+ERG+T EEF+L+KIHM++HIW+LAQQVKVRQR
Sbjct: 1   MAANFWASSHSKQLLDPEEVDVVPAADRERGITAEEFRLVKIHMSSHIWRLAQQVKVRQR 60

Query: 610 VIATAVTYFRRVYTRKSMTEYDPRLVAPTCLYLASKAEESTVQARLLVFYIKKMC-PDEK 434
           VIATA+TYFRRVYTRKSMTEYDPRLVAP CLYLASK EESTVQARLLVFYIKKMC  D+K
Sbjct: 61  VIATAITYFRRVYTRKSMTEYDPRLVAPACLYLASKVEESTVQARLLVFYIKKMCGSDDK 120

Query: 433 YRFEIKDILEMEMKLLEALDYYLIVFHPYRALLQLLQDAGMTDLTHYAWGLVNDTYKMDL 254
           YRFEIKDILEMEMKLLEALDYYL+V+HPYR LL LLQDAG+TDLT +AWGLVNDTYKMDL
Sbjct: 121 YRFEIKDILEMEMKLLEALDYYLVVYHPYRPLLHLLQDAGITDLTQFAWGLVNDTYKMDL 180

Query: 253 ILIYPPYMIALACIYIASVLKDKETTAWFEELRVDMNVVKNIAIEILDFYDYYKGDTCKG 74
           ILIYPPYMIALACIYIASVLKDK+TT WFEELRVDMN+VKNI++EILDFY+ YK D    
Sbjct: 181 ILIYPPYMIALACIYIASVLKDKDTTTWFEELRVDMNIVKNISMEILDFYETYKVD---- 236

Query: 73  EPARGIPEERINAALNKLATK 11
            P RG+ E++I   +NKL  K
Sbjct: 237 -PQRGLSEDKIAPVMNKLPAK 256


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