BLASTX nr result
ID: Dioscorea21_contig00005537
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00005537 (1171 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003581622.1| PREDICTED: E3 ubiquitin-protein ligase RNF13... 266 1e-68 gb|AFW57911.1| putative protease-associated RING zinc finger dom... 264 3e-68 ref|NP_001143559.1| uncharacterized protein LOC100276255 precurs... 264 3e-68 dbj|BAK06864.1| predicted protein [Hordeum vulgare subsp. vulgare] 260 5e-67 emb|CBI17361.3| unnamed protein product [Vitis vinifera] 250 6e-64 >ref|XP_003581622.1| PREDICTED: E3 ubiquitin-protein ligase RNF13-like [Brachypodium distachyon] Length = 270 Score = 266 bits (679), Expect = 1e-68 Identities = 130/252 (51%), Positives = 159/252 (63%) Frame = +2 Query: 191 SFLDAPARFAVPVGDRGVCGALYIADPIDACLPIGDFQLXXXXXXXXXXXXXFVLIERGA 370 SFLDAPARF V G+CG+L ADP DAC PI + FVL+ RG Sbjct: 27 SFLDAPARFGPRVSGDGICGSLRSADPSDACTPIKN--------SAGSGGRAFVLVVRGN 78 Query: 371 CSFEEKVRNAQNGGFGAAIVYDNQEKSGLYSMIGDPTGIHVHAVFVSKMAGETLKRFAQG 550 CSFE+KVR AQ GF A +VYD++EK+ LYSM+GD GIH+ AVF+SKMAGETLK+FA+G Sbjct: 79 CSFEDKVREAQRAGFNAVVVYDDEEKASLYSMVGDSEGIHIPAVFLSKMAGETLKKFARG 138 Query: 551 EEGECCIGSSMNETAGTXXXXXXXXXXXXXXXXXXXXXXRNCILLRQVAQRRPSSMNKEA 730 E+ ECCI SSM+ETAGT RNC LLR RP + K Sbjct: 139 EDSECCIESSMDETAGTVLVMSFVSLVVIISVLASFLFARNCRLLRHGVDNRPPYIKKHV 198 Query: 731 VEVFPCLTFSTSFLNSKCTAETCAICLEDYKDGERLRVLPCNHEFHSACVDSWLTKWGTF 910 V+ PCL + + + + CAICLEDY +G+ LR+LPC HEFH+ CVD WLTKWGTF Sbjct: 199 VDKLPCLVYKAPCSSGSTSEDACAICLEDYDNGDMLRLLPCRHEFHTVCVDPWLTKWGTF 258 Query: 911 CPVCKHDLSSGE 946 CPVCK ++ +GE Sbjct: 259 CPVCKLEVITGE 270 >gb|AFW57911.1| putative protease-associated RING zinc finger domain family protein [Zea mays] Length = 296 Score = 264 bits (675), Expect = 3e-68 Identities = 132/254 (51%), Positives = 159/254 (62%) Frame = +2 Query: 182 FSFSFLDAPARFAVPVGDRGVCGALYIADPIDACLPIGDFQLXXXXXXXXXXXXXFVLIE 361 FSF+FLDAPARF V G+CG+L ADP +AC I D FVLI Sbjct: 47 FSFTFLDAPARFGPRVSGDGICGSLRAADPAEACETIKD-----RGGRRGAGRKAFVLIA 101 Query: 362 RGACSFEEKVRNAQNGGFGAAIVYDNQEKSGLYSMIGDPTGIHVHAVFVSKMAGETLKRF 541 RG CSFEEKVR AQ GF A+IVYD++EK+ LYSM+G+ GIH+ A+FVSKMAGETLK+F Sbjct: 102 RGNCSFEEKVRAAQQAGFDASIVYDDEEKASLYSMVGESDGIHIPAIFVSKMAGETLKKF 161 Query: 542 AQGEEGECCIGSSMNETAGTXXXXXXXXXXXXXXXXXXXXXXRNCILLRQVAQRRPSSMN 721 A+GE+ ECCI SSM+ETAGT RNC LLR P + Sbjct: 162 ARGEDEECCINSSMDETAGTVLVMSFVSLVVIMSVLASFLFARNCRLLRHGVDNHPPYVK 221 Query: 722 KEAVEVFPCLTFSTSFLNSKCTAETCAICLEDYKDGERLRVLPCNHEFHSACVDSWLTKW 901 K+ VE FPC +S + E CAICLEDY +G+ LR LPC HEFH C+DSWLTKW Sbjct: 222 KQVVEKFPCSAYSAPCSSEDNFQEACAICLEDYNNGDMLRHLPCKHEFHKICIDSWLTKW 281 Query: 902 GTFCPVCKHDLSSG 943 G FCP+CK +++ G Sbjct: 282 GIFCPICKLEVTLG 295 >ref|NP_001143559.1| uncharacterized protein LOC100276255 precursor [Zea mays] gi|195622502|gb|ACG33081.1| hypothetical protein [Zea mays] Length = 276 Score = 264 bits (675), Expect = 3e-68 Identities = 132/254 (51%), Positives = 159/254 (62%) Frame = +2 Query: 182 FSFSFLDAPARFAVPVGDRGVCGALYIADPIDACLPIGDFQLXXXXXXXXXXXXXFVLIE 361 FSF+FLDAPARF V G+CG+L ADP +AC I D FVLI Sbjct: 27 FSFTFLDAPARFGPRVSGDGICGSLRAADPAEACETIKD-----RGGRRGAGRKAFVLIA 81 Query: 362 RGACSFEEKVRNAQNGGFGAAIVYDNQEKSGLYSMIGDPTGIHVHAVFVSKMAGETLKRF 541 RG CSFEEKVR AQ GF A+IVYD++EK+ LYSM+G+ GIH+ A+FVSKMAGETLK+F Sbjct: 82 RGNCSFEEKVRAAQQAGFDASIVYDDEEKASLYSMVGESDGIHIPAIFVSKMAGETLKKF 141 Query: 542 AQGEEGECCIGSSMNETAGTXXXXXXXXXXXXXXXXXXXXXXRNCILLRQVAQRRPSSMN 721 A+GE+ ECCI SSM+ETAGT RNC LLR P + Sbjct: 142 ARGEDEECCINSSMDETAGTVLVMSFVSLVVIMSVLASFLFARNCRLLRHGVDNHPPYVK 201 Query: 722 KEAVEVFPCLTFSTSFLNSKCTAETCAICLEDYKDGERLRVLPCNHEFHSACVDSWLTKW 901 K+ VE FPC +S + E CAICLEDY +G+ LR LPC HEFH C+DSWLTKW Sbjct: 202 KQVVEKFPCSAYSAPCSSEDNFQEACAICLEDYNNGDMLRHLPCKHEFHKICIDSWLTKW 261 Query: 902 GTFCPVCKHDLSSG 943 G FCP+CK +++ G Sbjct: 262 GIFCPICKLEVTLG 275 >dbj|BAK06864.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 277 Score = 260 bits (664), Expect = 5e-67 Identities = 129/252 (51%), Positives = 157/252 (62%) Frame = +2 Query: 191 SFLDAPARFAVPVGDRGVCGALYIADPIDACLPIGDFQLXXXXXXXXXXXXXFVLIERGA 370 +FLDAPARF V G+CG+L ADP DAC P+ FVLI RG Sbjct: 34 TFLDAPARFGPRVTSDGICGSLRAADPADACTPV--------RAAPGSGGMAFVLIARGN 85 Query: 371 CSFEEKVRNAQNGGFGAAIVYDNQEKSGLYSMIGDPTGIHVHAVFVSKMAGETLKRFAQG 550 CSFE KVR AQ GF AA+V+D+++K+ LYSM+GDP GIH+ AVFVSKMAG+TLK+FA+G Sbjct: 86 CSFEGKVRAAQLAGFDAALVHDDEDKASLYSMVGDPEGIHIPAVFVSKMAGQTLKKFARG 145 Query: 551 EEGECCIGSSMNETAGTXXXXXXXXXXXXXXXXXXXXXXRNCILLRQVAQRRPSSMNKEA 730 E+GECCI SSM+ETAGT RNC LLR P + K Sbjct: 146 EDGECCINSSMDETAGTVLVMSFVSLVVIISVVASFLFARNCRLLRHGVDNHPPCIKKHV 205 Query: 731 VEVFPCLTFSTSFLNSKCTAETCAICLEDYKDGERLRVLPCNHEFHSACVDSWLTKWGTF 910 VE P L + + E CAICLEDY +G+ LR+LPC HEFH C+D WLTKWGTF Sbjct: 206 VEKIPSLVYKAPCSSGNNCEEACAICLEDYDNGDMLRLLPCKHEFHVECIDPWLTKWGTF 265 Query: 911 CPVCKHDLSSGE 946 CPVCK ++++GE Sbjct: 266 CPVCKLEVTTGE 277 >emb|CBI17361.3| unnamed protein product [Vitis vinifera] Length = 352 Score = 250 bits (638), Expect = 6e-64 Identities = 134/254 (52%), Positives = 163/254 (64%), Gaps = 2/254 (0%) Frame = +2 Query: 185 SFSFLDAPARFAVPVGDRGVCGALYIADPIDACLPIGDFQLXXXXXXXXXXXXXFVLIER 364 S SF+DAPARFAV V G+CGAL++ADP++AC L F LI R Sbjct: 91 SASFIDAPARFAVSVNSTGICGALHLADPLEACS-----SLLNRFRSQEIDTIKFALIIR 145 Query: 365 GACSFEEKVRNAQNGGFGAAIVYDNQEKSGLYSMIGDPTGIHVHAVFVSKMAGETLKRFA 544 G C+FE+KVRNAQ+ GF A IVYD+++K L SMIG+ GI V AVFVSK AGETLK +A Sbjct: 146 GKCAFEDKVRNAQDAGFHAVIVYDDRDKGNLVSMIGNSQGIWVPAVFVSKAAGETLKIYA 205 Query: 545 QGEEGECCI-GSSMNETAGTXXXXXXXXXXXXXXXXXXXXXXRNCILLRQVAQRRPSSMN 721 QG+EGECCI S E+A T RN L ++ S++ Sbjct: 206 QGQEGECCIINPSFPESAWTVMVISFISLLVIATVVLTFFLTRNRRLNQRGTNPHRPSVD 265 Query: 722 KEAVEVFPCLTFSTSFLNSKC-TAETCAICLEDYKDGERLRVLPCNHEFHSACVDSWLTK 898 + VEV PC TFS + +C +TC+ICLEDYKDGERLRVLPC HEFH++CVDSWLTK Sbjct: 266 AKLVEVLPCFTFSQA---CECRVGDTCSICLEDYKDGERLRVLPCQHEFHASCVDSWLTK 322 Query: 899 WGTFCPVCKHDLSS 940 WGTFCPVCK+DLS+ Sbjct: 323 WGTFCPVCKYDLST 336