BLASTX nr result

ID: Dioscorea21_contig00005537 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00005537
         (1171 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003581622.1| PREDICTED: E3 ubiquitin-protein ligase RNF13...   266   1e-68
gb|AFW57911.1| putative protease-associated RING zinc finger dom...   264   3e-68
ref|NP_001143559.1| uncharacterized protein LOC100276255 precurs...   264   3e-68
dbj|BAK06864.1| predicted protein [Hordeum vulgare subsp. vulgare]    260   5e-67
emb|CBI17361.3| unnamed protein product [Vitis vinifera]              250   6e-64

>ref|XP_003581622.1| PREDICTED: E3 ubiquitin-protein ligase RNF13-like [Brachypodium
           distachyon]
          Length = 270

 Score =  266 bits (679), Expect = 1e-68
 Identities = 130/252 (51%), Positives = 159/252 (63%)
 Frame = +2

Query: 191 SFLDAPARFAVPVGDRGVCGALYIADPIDACLPIGDFQLXXXXXXXXXXXXXFVLIERGA 370
           SFLDAPARF   V   G+CG+L  ADP DAC PI +                FVL+ RG 
Sbjct: 27  SFLDAPARFGPRVSGDGICGSLRSADPSDACTPIKN--------SAGSGGRAFVLVVRGN 78

Query: 371 CSFEEKVRNAQNGGFGAAIVYDNQEKSGLYSMIGDPTGIHVHAVFVSKMAGETLKRFAQG 550
           CSFE+KVR AQ  GF A +VYD++EK+ LYSM+GD  GIH+ AVF+SKMAGETLK+FA+G
Sbjct: 79  CSFEDKVREAQRAGFNAVVVYDDEEKASLYSMVGDSEGIHIPAVFLSKMAGETLKKFARG 138

Query: 551 EEGECCIGSSMNETAGTXXXXXXXXXXXXXXXXXXXXXXRNCILLRQVAQRRPSSMNKEA 730
           E+ ECCI SSM+ETAGT                      RNC LLR     RP  + K  
Sbjct: 139 EDSECCIESSMDETAGTVLVMSFVSLVVIISVLASFLFARNCRLLRHGVDNRPPYIKKHV 198

Query: 731 VEVFPCLTFSTSFLNSKCTAETCAICLEDYKDGERLRVLPCNHEFHSACVDSWLTKWGTF 910
           V+  PCL +     +   + + CAICLEDY +G+ LR+LPC HEFH+ CVD WLTKWGTF
Sbjct: 199 VDKLPCLVYKAPCSSGSTSEDACAICLEDYDNGDMLRLLPCRHEFHTVCVDPWLTKWGTF 258

Query: 911 CPVCKHDLSSGE 946
           CPVCK ++ +GE
Sbjct: 259 CPVCKLEVITGE 270


>gb|AFW57911.1| putative protease-associated RING zinc finger domain family protein
           [Zea mays]
          Length = 296

 Score =  264 bits (675), Expect = 3e-68
 Identities = 132/254 (51%), Positives = 159/254 (62%)
 Frame = +2

Query: 182 FSFSFLDAPARFAVPVGDRGVCGALYIADPIDACLPIGDFQLXXXXXXXXXXXXXFVLIE 361
           FSF+FLDAPARF   V   G+CG+L  ADP +AC  I D                FVLI 
Sbjct: 47  FSFTFLDAPARFGPRVSGDGICGSLRAADPAEACETIKD-----RGGRRGAGRKAFVLIA 101

Query: 362 RGACSFEEKVRNAQNGGFGAAIVYDNQEKSGLYSMIGDPTGIHVHAVFVSKMAGETLKRF 541
           RG CSFEEKVR AQ  GF A+IVYD++EK+ LYSM+G+  GIH+ A+FVSKMAGETLK+F
Sbjct: 102 RGNCSFEEKVRAAQQAGFDASIVYDDEEKASLYSMVGESDGIHIPAIFVSKMAGETLKKF 161

Query: 542 AQGEEGECCIGSSMNETAGTXXXXXXXXXXXXXXXXXXXXXXRNCILLRQVAQRRPSSMN 721
           A+GE+ ECCI SSM+ETAGT                      RNC LLR      P  + 
Sbjct: 162 ARGEDEECCINSSMDETAGTVLVMSFVSLVVIMSVLASFLFARNCRLLRHGVDNHPPYVK 221

Query: 722 KEAVEVFPCLTFSTSFLNSKCTAETCAICLEDYKDGERLRVLPCNHEFHSACVDSWLTKW 901
           K+ VE FPC  +S    +     E CAICLEDY +G+ LR LPC HEFH  C+DSWLTKW
Sbjct: 222 KQVVEKFPCSAYSAPCSSEDNFQEACAICLEDYNNGDMLRHLPCKHEFHKICIDSWLTKW 281

Query: 902 GTFCPVCKHDLSSG 943
           G FCP+CK +++ G
Sbjct: 282 GIFCPICKLEVTLG 295


>ref|NP_001143559.1| uncharacterized protein LOC100276255 precursor [Zea mays]
           gi|195622502|gb|ACG33081.1| hypothetical protein [Zea
           mays]
          Length = 276

 Score =  264 bits (675), Expect = 3e-68
 Identities = 132/254 (51%), Positives = 159/254 (62%)
 Frame = +2

Query: 182 FSFSFLDAPARFAVPVGDRGVCGALYIADPIDACLPIGDFQLXXXXXXXXXXXXXFVLIE 361
           FSF+FLDAPARF   V   G+CG+L  ADP +AC  I D                FVLI 
Sbjct: 27  FSFTFLDAPARFGPRVSGDGICGSLRAADPAEACETIKD-----RGGRRGAGRKAFVLIA 81

Query: 362 RGACSFEEKVRNAQNGGFGAAIVYDNQEKSGLYSMIGDPTGIHVHAVFVSKMAGETLKRF 541
           RG CSFEEKVR AQ  GF A+IVYD++EK+ LYSM+G+  GIH+ A+FVSKMAGETLK+F
Sbjct: 82  RGNCSFEEKVRAAQQAGFDASIVYDDEEKASLYSMVGESDGIHIPAIFVSKMAGETLKKF 141

Query: 542 AQGEEGECCIGSSMNETAGTXXXXXXXXXXXXXXXXXXXXXXRNCILLRQVAQRRPSSMN 721
           A+GE+ ECCI SSM+ETAGT                      RNC LLR      P  + 
Sbjct: 142 ARGEDEECCINSSMDETAGTVLVMSFVSLVVIMSVLASFLFARNCRLLRHGVDNHPPYVK 201

Query: 722 KEAVEVFPCLTFSTSFLNSKCTAETCAICLEDYKDGERLRVLPCNHEFHSACVDSWLTKW 901
           K+ VE FPC  +S    +     E CAICLEDY +G+ LR LPC HEFH  C+DSWLTKW
Sbjct: 202 KQVVEKFPCSAYSAPCSSEDNFQEACAICLEDYNNGDMLRHLPCKHEFHKICIDSWLTKW 261

Query: 902 GTFCPVCKHDLSSG 943
           G FCP+CK +++ G
Sbjct: 262 GIFCPICKLEVTLG 275


>dbj|BAK06864.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 277

 Score =  260 bits (664), Expect = 5e-67
 Identities = 129/252 (51%), Positives = 157/252 (62%)
 Frame = +2

Query: 191 SFLDAPARFAVPVGDRGVCGALYIADPIDACLPIGDFQLXXXXXXXXXXXXXFVLIERGA 370
           +FLDAPARF   V   G+CG+L  ADP DAC P+                  FVLI RG 
Sbjct: 34  TFLDAPARFGPRVTSDGICGSLRAADPADACTPV--------RAAPGSGGMAFVLIARGN 85

Query: 371 CSFEEKVRNAQNGGFGAAIVYDNQEKSGLYSMIGDPTGIHVHAVFVSKMAGETLKRFAQG 550
           CSFE KVR AQ  GF AA+V+D+++K+ LYSM+GDP GIH+ AVFVSKMAG+TLK+FA+G
Sbjct: 86  CSFEGKVRAAQLAGFDAALVHDDEDKASLYSMVGDPEGIHIPAVFVSKMAGQTLKKFARG 145

Query: 551 EEGECCIGSSMNETAGTXXXXXXXXXXXXXXXXXXXXXXRNCILLRQVAQRRPSSMNKEA 730
           E+GECCI SSM+ETAGT                      RNC LLR      P  + K  
Sbjct: 146 EDGECCINSSMDETAGTVLVMSFVSLVVIISVVASFLFARNCRLLRHGVDNHPPCIKKHV 205

Query: 731 VEVFPCLTFSTSFLNSKCTAETCAICLEDYKDGERLRVLPCNHEFHSACVDSWLTKWGTF 910
           VE  P L +     +     E CAICLEDY +G+ LR+LPC HEFH  C+D WLTKWGTF
Sbjct: 206 VEKIPSLVYKAPCSSGNNCEEACAICLEDYDNGDMLRLLPCKHEFHVECIDPWLTKWGTF 265

Query: 911 CPVCKHDLSSGE 946
           CPVCK ++++GE
Sbjct: 266 CPVCKLEVTTGE 277


>emb|CBI17361.3| unnamed protein product [Vitis vinifera]
          Length = 352

 Score =  250 bits (638), Expect = 6e-64
 Identities = 134/254 (52%), Positives = 163/254 (64%), Gaps = 2/254 (0%)
 Frame = +2

Query: 185 SFSFLDAPARFAVPVGDRGVCGALYIADPIDACLPIGDFQLXXXXXXXXXXXXXFVLIER 364
           S SF+DAPARFAV V   G+CGAL++ADP++AC       L             F LI R
Sbjct: 91  SASFIDAPARFAVSVNSTGICGALHLADPLEACS-----SLLNRFRSQEIDTIKFALIIR 145

Query: 365 GACSFEEKVRNAQNGGFGAAIVYDNQEKSGLYSMIGDPTGIHVHAVFVSKMAGETLKRFA 544
           G C+FE+KVRNAQ+ GF A IVYD+++K  L SMIG+  GI V AVFVSK AGETLK +A
Sbjct: 146 GKCAFEDKVRNAQDAGFHAVIVYDDRDKGNLVSMIGNSQGIWVPAVFVSKAAGETLKIYA 205

Query: 545 QGEEGECCI-GSSMNETAGTXXXXXXXXXXXXXXXXXXXXXXRNCILLRQVAQRRPSSMN 721
           QG+EGECCI   S  E+A T                      RN  L ++       S++
Sbjct: 206 QGQEGECCIINPSFPESAWTVMVISFISLLVIATVVLTFFLTRNRRLNQRGTNPHRPSVD 265

Query: 722 KEAVEVFPCLTFSTSFLNSKC-TAETCAICLEDYKDGERLRVLPCNHEFHSACVDSWLTK 898
            + VEV PC TFS +    +C   +TC+ICLEDYKDGERLRVLPC HEFH++CVDSWLTK
Sbjct: 266 AKLVEVLPCFTFSQA---CECRVGDTCSICLEDYKDGERLRVLPCQHEFHASCVDSWLTK 322

Query: 899 WGTFCPVCKHDLSS 940
           WGTFCPVCK+DLS+
Sbjct: 323 WGTFCPVCKYDLST 336


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