BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00005504
         (1258 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305441.1| predicted protein [Populus trichocarpa] gi|2...   624   e-176
ref|XP_002279094.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   622   e-176
ref|XP_004134588.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   600   e-169
dbj|BAD19076.1| putative DEAD box-like RNA helicase [Oryza sativ...   561   e-157
ref|NP_001048386.1| Os02g0795900 [Oryza sativa Japonica Group] g...   561   e-157

>ref|XP_002305441.1| predicted protein [Populus trichocarpa] gi|222848405|gb|EEE85952.1|
            predicted protein [Populus trichocarpa]
          Length = 518

 Score =  624 bits (1609), Expect = e-176
 Identities = 315/415 (75%), Positives = 361/415 (86%), Gaps = 8/415 (1%)
 Frame = +2

Query: 38   MEEDT---KPKSVPVLPWMRSPVDIDHFDECPLGLLPCLDPRLEDALRKIGIHSLFPVQA 208
            MEE T   + K+VPVLPWMRSPVD+  F+E PL +LPCLDPRL+ AL+ +G  +LFPVQ 
Sbjct: 1    MEESTIAKQNKNVPVLPWMRSPVDVSKFEEYPLDILPCLDPRLKMALQNMGFKTLFPVQI 60

Query: 209  AVWQETIGPGAFERDICVNSPTGSGKTLAYALPIVQMLSTRKVRCLRALVVLPTRDLALQ 388
            AVWQETIGPGAFERD+C+NSPTGSGKTLAYALPIVQ+LSTR V+CLRALVVLPTRDLALQ
Sbjct: 61   AVWQETIGPGAFERDLCINSPTGSGKTLAYALPIVQLLSTRAVKCLRALVVLPTRDLALQ 120

Query: 389  VKEVFASIAPSVGLSVGLAVGQSSIADEISELIKRPKYDMGVSLDPEDLHVELQSAVDIL 568
            VK+VFA+IAP++GLSVGLAVGQSSIADEISELIK+P+++ G+  DP+D+  ELQS+VDIL
Sbjct: 121  VKQVFAAIAPAMGLSVGLAVGQSSIADEISELIKKPEHEAGICYDPQDVLQELQSSVDIL 180

Query: 569  VATPGRLMDHITTTKGFTLEHLCYLVVDETDRMLREAYQSWLPTVLQLTCLNDQAIFNQA 748
            VATPGRLMDHITTTKGFTLEHLCYLVVDETDR+LRE+YQSWLPTVL+LT   D+++    
Sbjct: 181  VATPGRLMDHITTTKGFTLEHLCYLVVDETDRLLRESYQSWLPTVLKLTRPYDESLV--- 237

Query: 749  RSGLNLF-----NSLNTLRRSGVERGFKGKTYPRLVKMILSATLTQDPSKLSQLALHHPL 913
              G+N F      SL T+RR GVERGFKGK+YPRL KM+LSATLTQDPSKL+QL LHHPL
Sbjct: 238  -PGVNNFLPCASGSLKTIRRCGVERGFKGKSYPRLAKMVLSATLTQDPSKLAQLNLHHPL 296

Query: 914  LMTSGDSRYKLPEKLKSYKLICESKLKPLYLVALLQHLSGEKCLVFTSSVESTHRLSVLL 1093
             +T+G  RY+LPEKL+SYKLIC SKLKPLYLVA+LQHL GEKC+VFTSSVESTHRL  LL
Sbjct: 297  FLTTGQRRYQLPEKLESYKLICVSKLKPLYLVAVLQHLGGEKCIVFTSSVESTHRLCTLL 356

Query: 1094 NFFGELPFKFSEYSGLQRQSVRSKTLSGFRDGEIDVLVSSDAMTRGMDVEGVRNV 1258
            NFFG+L  K  EYSGLQRQSVRSKTL  FR+GEI VLVSSDAMTRGMD+EGVRN+
Sbjct: 357  NFFGDLKVKIKEYSGLQRQSVRSKTLKAFREGEIQVLVSSDAMTRGMDIEGVRNI 411


>ref|XP_002279094.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 1 [Vitis vinifera]
            gi|297740757|emb|CBI30939.3| unnamed protein product
            [Vitis vinifera]
          Length = 516

 Score =  622 bits (1605), Expect = e-176
 Identities = 310/408 (75%), Positives = 357/408 (87%), Gaps = 1/408 (0%)
 Frame = +2

Query: 38   MEEDTKPKSVPVLPWMRSPVDIDHFDECPLGLLPCLDPRLEDALRKIGIHSLFPVQAAVW 217
            M+E  + K+VPVLPWMRSP+D+  F+ECPL L PCLDPRLE AL+ +G  SLFPVQ AVW
Sbjct: 1    MKEAKQKKNVPVLPWMRSPIDVSLFEECPLHLFPCLDPRLEVALKNMGFSSLFPVQVAVW 60

Query: 218  QETIGPGAFERDICVNSPTGSGKTLAYALPIVQMLSTRKVRCLRALVVLPTRDLALQVKE 397
            QET+GPGAFERD+C+NSPTGSGKTLAYALPIV +LS+R V+CLRALVVLPTRDLALQVKE
Sbjct: 61   QETVGPGAFERDLCINSPTGSGKTLAYALPIVNVLSSRAVKCLRALVVLPTRDLALQVKE 120

Query: 398  VFASIAPSVGLSVGLAVGQSSIADEISELIKRPKYDMGVSLDPEDLHVELQSAVDILVAT 577
            VFA+IAP+VGLSVGLAVGQ+SIADEISELIKRPK + G+  DPED+ +ELQS+VDILVAT
Sbjct: 121  VFAAIAPAVGLSVGLAVGQTSIADEISELIKRPKLEAGICYDPEDISLELQSSVDILVAT 180

Query: 578  PGRLMDHITTTKGFTLEHLCYLVVDETDRMLREAYQSWLPTVLQLTCLNDQAIFNQARSG 757
            PGRLMDHI TTKGFTL+HL YLVVDETDR+LREAYQSWLPTVLQLT  +D+++F   ++ 
Sbjct: 181  PGRLMDHINTTKGFTLKHLRYLVVDETDRLLREAYQSWLPTVLQLTRSSDESLFPCGKTI 240

Query: 758  L-NLFNSLNTLRRSGVERGFKGKTYPRLVKMILSATLTQDPSKLSQLALHHPLLMTSGDS 934
            L + F S+NT+RR GVERGFKG++YPRLVK++LSATLTQDPSKL+ L LHHPLL+T+G  
Sbjct: 241  LPSTFGSMNTIRRCGVERGFKGRSYPRLVKIVLSATLTQDPSKLALLDLHHPLLLTAGQR 300

Query: 935  RYKLPEKLKSYKLICESKLKPLYLVALLQHLSGEKCLVFTSSVESTHRLSVLLNFFGELP 1114
            RY+LPEKLKS+KLICESKLKPLYLVALL+ L GEKC+VFTSSVES HRL  LLNFFG+L 
Sbjct: 301  RYQLPEKLKSFKLICESKLKPLYLVALLRDLGGEKCIVFTSSVESAHRLCTLLNFFGDLQ 360

Query: 1115 FKFSEYSGLQRQSVRSKTLSGFRDGEIDVLVSSDAMTRGMDVEGVRNV 1258
             K  EYSGLQ Q VRSKTL  FR G+I VL+SSD MTRGMDVEGVRNV
Sbjct: 361  IKIGEYSGLQHQRVRSKTLEEFRGGKIQVLISSDGMTRGMDVEGVRNV 408


>ref|XP_004134588.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 1-like [Cucumis
            sativus] gi|449490565|ref|XP_004158642.1| PREDICTED:
            DEAD-box ATP-dependent RNA helicase 1-like [Cucumis
            sativus]
          Length = 517

 Score =  600 bits (1546), Expect = e-169
 Identities = 307/408 (75%), Positives = 345/408 (84%), Gaps = 1/408 (0%)
 Frame = +2

Query: 38   MEEDTKPKSVPVLPWMRSPVDIDHFDECPLGLLPCLDPRLEDALRKIGIHSLFPVQAAVW 217
            M +  K K +PVLPWMRSPVD+   +ECPL +LP LD RL+ AL+ +GI SLFPVQ AVW
Sbjct: 1    MADKQKRKRIPVLPWMRSPVDVSLIEECPLEILPMLDHRLKAALQNMGISSLFPVQLAVW 60

Query: 218  QETIGPGAFERDICVNSPTGSGKTLAYALPIVQMLSTRKVRCLRALVVLPTRDLALQVKE 397
            QE IGPG+F+RD+C+NSPTGSGKTLAYALPIVQMLS+R V+CLRALVVLPTRDLALQVKE
Sbjct: 61   QEAIGPGSFDRDLCINSPTGSGKTLAYALPIVQMLSSRTVKCLRALVVLPTRDLALQVKE 120

Query: 398  VFASIAPSVGLSVGLAVGQSSIADEISELIKRPKYDMGVSLDPEDLHVELQSAVDILVAT 577
            VF++IAP+VGLSVGLAVGQSSIADEISELIKRPK + G+  DP+D  VELQS+VDILVAT
Sbjct: 121  VFSAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPDDFLVELQSSVDILVAT 180

Query: 578  PGRLMDHITTTKGFTLEHLCYLVVDETDRMLREAYQSWLPTVLQLTCLNDQA-IFNQARS 754
            PGRLMDHI  TKGFTL+HL YLV+DETDR+LREAYQSWLPTVLQLT  +D + IF    S
Sbjct: 181  PGRLMDHINFTKGFTLQHLRYLVIDETDRLLREAYQSWLPTVLQLTHADDSSIIFPSYIS 240

Query: 755  GLNLFNSLNTLRRSGVERGFKGKTYPRLVKMILSATLTQDPSKLSQLALHHPLLMTSGDS 934
                  SL T+RR GVERGFKGK YPRL KM+LSATLTQDP KL+QL LHHPL +T+G  
Sbjct: 241  NPCSDGSLKTIRRFGVERGFKGKPYPRLAKMVLSATLTQDPGKLAQLDLHHPLFLTTGKR 300

Query: 935  RYKLPEKLKSYKLICESKLKPLYLVALLQHLSGEKCLVFTSSVESTHRLSVLLNFFGELP 1114
            RYKLPEKL+SY +ICESKLKPLYLVALLQ L  EKC+VFTSSVESTHRL  LLNFF +L 
Sbjct: 301  RYKLPEKLESYMMICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCSLLNFFEDLE 360

Query: 1115 FKFSEYSGLQRQSVRSKTLSGFRDGEIDVLVSSDAMTRGMDVEGVRNV 1258
             K  EYSGLQRQS+RSKTL+ FR GEI VLVSSDAMTRGMDVEGV+NV
Sbjct: 361  LKIKEYSGLQRQSLRSKTLNAFRGGEIQVLVSSDAMTRGMDVEGVKNV 408


>dbj|BAD19076.1| putative DEAD box-like RNA helicase [Oryza sativa Japonica Group]
            gi|47497232|dbj|BAD19277.1| putative DEAD box-like RNA
            helicase [Oryza sativa Japonica Group]
          Length = 517

 Score =  561 bits (1446), Expect = e-157
 Identities = 287/407 (70%), Positives = 333/407 (81%), Gaps = 1/407 (0%)
 Frame = +2

Query: 41   EEDTKPKS-VPVLPWMRSPVDIDHFDECPLGLLPCLDPRLEDALRKIGIHSLFPVQAAVW 217
            EE+  P S VP LPWMR+PVDID F  CP+  LP LDPRL   L+++GI S FPVQ A W
Sbjct: 5    EEEGGPSSRVPHLPWMRNPVDIDSFSGCPVAHLPRLDPRLVKPLQRMGIESFFPVQVAAW 64

Query: 218  QETIGPGAFERDICVNSPTGSGKTLAYALPIVQMLSTRKVRCLRALVVLPTRDLALQVKE 397
             ETIGPGAFERDIC+NSPTGSGKTLAYALPIVQML+TRKVRCLRALVVLPTRDLALQVKE
Sbjct: 65   LETIGPGAFERDICINSPTGSGKTLAYALPIVQMLATRKVRCLRALVVLPTRDLALQVKE 124

Query: 398  VFASIAPSVGLSVGLAVGQSSIADEISELIKRPKYDMGVSLDPEDLHVELQSAVDILVAT 577
            VF +IAP VGLSVG AVGQSSIADE+S LI++ K  +  SLD E + +E Q+ VDILVAT
Sbjct: 125  VFDAIAPVVGLSVGSAVGQSSIADEVSNLIEKSKQGLFPSLDEEYIQMEPQTKVDILVAT 184

Query: 578  PGRLMDHITTTKGFTLEHLCYLVVDETDRMLREAYQSWLPTVLQLTCLNDQAIFNQARSG 757
            PGRLMDHI+ TKGF+LEHL YLVVDETDRMLREAYQSWLPTV+QLT  +DQ       +G
Sbjct: 185  PGRLMDHISMTKGFSLEHLQYLVVDETDRMLREAYQSWLPTVIQLTRSSDQNHSWSDMNG 244

Query: 758  LNLFNSLNTLRRSGVERGFKGKTYPRLVKMILSATLTQDPSKLSQLALHHPLLMTSGDSR 937
              L + L T+RRSGVERGFKGK++PRL K++LSATLTQDPSKLSQL L HPLL+ SG  R
Sbjct: 245  ETLLHPLTTIRRSGVERGFKGKSFPRLAKIVLSATLTQDPSKLSQLELQHPLLLNSGKKR 304

Query: 938  YKLPEKLKSYKLICESKLKPLYLVALLQHLSGEKCLVFTSSVESTHRLSVLLNFFGELPF 1117
            Y++P KL+SYKL+C+S LKPL L+ LLQ L GEKCLVFTSSVES+HRLS LL FF +LPF
Sbjct: 305  YRIPTKLQSYKLVCKSNLKPLSLIVLLQELRGEKCLVFTSSVESSHRLSTLLEFFEDLPF 364

Query: 1118 KFSEYSGLQRQSVRSKTLSGFRDGEIDVLVSSDAMTRGMDVEGVRNV 1258
            KFSEYS LQR+S R KTL  F++G+IDVL+ +D M RG+ ++G+R V
Sbjct: 365  KFSEYSRLQRESTRRKTLDAFKEGKIDVLIGTDRMARGIHIDGLRYV 411


>ref|NP_001048386.1| Os02g0795900 [Oryza sativa Japonica Group]
            gi|122170850|sp|Q0DWT8.1|RH1_ORYSJ RecName: Full=DEAD-box
            ATP-dependent RNA helicase 1 gi|113537917|dbj|BAF10300.1|
            Os02g0795900 [Oryza sativa Japonica Group]
            gi|215740532|dbj|BAG97188.1| unnamed protein product
            [Oryza sativa Japonica Group]
          Length = 521

 Score =  561 bits (1446), Expect = e-157
 Identities = 287/407 (70%), Positives = 333/407 (81%), Gaps = 1/407 (0%)
 Frame = +2

Query: 41   EEDTKPKS-VPVLPWMRSPVDIDHFDECPLGLLPCLDPRLEDALRKIGIHSLFPVQAAVW 217
            EE+  P S VP LPWMR+PVDID F  CP+  LP LDPRL   L+++GI S FPVQ A W
Sbjct: 9    EEEGGPSSRVPHLPWMRNPVDIDSFSGCPVAHLPRLDPRLVKPLQRMGIESFFPVQVAAW 68

Query: 218  QETIGPGAFERDICVNSPTGSGKTLAYALPIVQMLSTRKVRCLRALVVLPTRDLALQVKE 397
             ETIGPGAFERDIC+NSPTGSGKTLAYALPIVQML+TRKVRCLRALVVLPTRDLALQVKE
Sbjct: 69   LETIGPGAFERDICINSPTGSGKTLAYALPIVQMLATRKVRCLRALVVLPTRDLALQVKE 128

Query: 398  VFASIAPSVGLSVGLAVGQSSIADEISELIKRPKYDMGVSLDPEDLHVELQSAVDILVAT 577
            VF +IAP VGLSVG AVGQSSIADE+S LI++ K  +  SLD E + +E Q+ VDILVAT
Sbjct: 129  VFDAIAPVVGLSVGSAVGQSSIADEVSNLIEKSKQGLFPSLDEEYIQMEPQTKVDILVAT 188

Query: 578  PGRLMDHITTTKGFTLEHLCYLVVDETDRMLREAYQSWLPTVLQLTCLNDQAIFNQARSG 757
            PGRLMDHI+ TKGF+LEHL YLVVDETDRMLREAYQSWLPTV+QLT  +DQ       +G
Sbjct: 189  PGRLMDHISMTKGFSLEHLQYLVVDETDRMLREAYQSWLPTVIQLTRSSDQNHSWSDMNG 248

Query: 758  LNLFNSLNTLRRSGVERGFKGKTYPRLVKMILSATLTQDPSKLSQLALHHPLLMTSGDSR 937
              L + L T+RRSGVERGFKGK++PRL K++LSATLTQDPSKLSQL L HPLL+ SG  R
Sbjct: 249  ETLLHPLTTIRRSGVERGFKGKSFPRLAKIVLSATLTQDPSKLSQLELQHPLLLNSGKKR 308

Query: 938  YKLPEKLKSYKLICESKLKPLYLVALLQHLSGEKCLVFTSSVESTHRLSVLLNFFGELPF 1117
            Y++P KL+SYKL+C+S LKPL L+ LLQ L GEKCLVFTSSVES+HRLS LL FF +LPF
Sbjct: 309  YRIPTKLQSYKLVCKSNLKPLSLIVLLQELRGEKCLVFTSSVESSHRLSTLLEFFEDLPF 368

Query: 1118 KFSEYSGLQRQSVRSKTLSGFRDGEIDVLVSSDAMTRGMDVEGVRNV 1258
            KFSEYS LQR+S R KTL  F++G+IDVL+ +D M RG+ ++G+R V
Sbjct: 369  KFSEYSRLQRESTRRKTLDAFKEGKIDVLIGTDRMARGIHIDGLRYV 415