BLASTX nr result

ID: Dioscorea21_contig00005494 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00005494
         (1146 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004135061.1| PREDICTED: probable ribose-5-phosphate isome...   324   3e-86
ref|XP_003536637.1| PREDICTED: probable ribose-5-phosphate isome...   319   7e-85
ref|XP_003555942.1| PREDICTED: probable ribose-5-phosphate isome...   316   6e-84
tpg|DAA47099.1| TPA: ribose-5-phosphate isomerase [Zea mays]          313   4e-83
gb|ACN34846.1| unknown [Zea mays] gi|414868543|tpg|DAA47100.1| T...   313   4e-83

>ref|XP_004135061.1| PREDICTED: probable ribose-5-phosphate isomerase-like [Cucumis
           sativus] gi|449493428|ref|XP_004159286.1| PREDICTED:
           probable ribose-5-phosphate isomerase-like [Cucumis
           sativus]
          Length = 275

 Score =  324 bits (830), Expect = 3e-86
 Identities = 164/237 (69%), Positives = 201/237 (84%)
 Frame = -2

Query: 998 SQDELKRIAAHRAVDLVESGMVLGLGTGSTAVHALDRIGDLLRCGVLHDIVGIPTSKKTE 819
           +QDELK+IAA++AV+ VESGMVLGLGTGSTA HA+DRIG+LLR G L +I+GIPTSKKT 
Sbjct: 42  TQDELKKIAAYKAVEYVESGMVLGLGTGSTAKHAVDRIGELLRQGKLKNIIGIPTSKKTH 101

Query: 818 AHALSVGIPLSDLDRHPSVDLSIDGADEVDPHLNLVKGRGGSLLREKMIEGASKRFVVIV 639
             A+S+GIPLSDLD HP +DL+IDGADEVDPHLNLVKGRGGSLLREKM+EGA K+FVVIV
Sbjct: 102 EQAVSLGIPLSDLDSHPVLDLAIDGADEVDPHLNLVKGRGGSLLREKMVEGACKKFVVIV 161

Query: 638 DDSKMVDRLGCSGNSVPVEIIPFCWGYTLGQLKKLFAGECGFDARLRMTGDEKKEPFLTD 459
           D+SK+V  +G SG ++PVEI+PFCW +T  +L+KLF G  G  A+LR +G E  EPF+TD
Sbjct: 162 DESKLVKYVGGSGLAMPVEIVPFCWNFTAARLQKLFEGS-GCVAKLRTSG-ESGEPFVTD 219

Query: 458 NSNYIIDLYFENGITRDLNEVSDEILRLTGVIEHGMFLGLASSVIIAGEDGVTVKNK 288
           N NYI+DLYF+  I  DLN  SDEILRL GV+EHGMFLG+A+++I+AGE G+T+KNK
Sbjct: 220 NGNYIVDLYFKEDI-GDLNVASDEILRLAGVVEHGMFLGMATTLIVAGELGITIKNK 275


>ref|XP_003536637.1| PREDICTED: probable ribose-5-phosphate isomerase-like [Glycine max]
          Length = 266

 Score =  319 bits (818), Expect = 7e-85
 Identities = 165/247 (66%), Positives = 205/247 (82%), Gaps = 4/247 (1%)
 Frame = -2

Query: 1016 HPAAPT---SQDELKRIAAHRAVDLVESGMVLGLGTGSTAVHALDRIGDLLRCGVLHDIV 846
            HP++P+   +QD+LK+IAA++AV+ VESGMVLGLGTGSTA HA+DRIG+LLR G L DIV
Sbjct: 22   HPSSPSVILTQDDLKKIAAYKAVEYVESGMVLGLGTGSTAKHAVDRIGELLRQGKLKDIV 81

Query: 845  GIPTSKKTEAHALSVGIPLSDLDRHPSVDLSIDGADEVDPHLNLVKGRGGSLLREKMIEG 666
            GIPTS KT   ALS+GIPLSDLD HP++DL+IDGADEVDP LNLVKGRGGSLLREKM+EG
Sbjct: 82   GIPTSTKTHEQALSLGIPLSDLDAHPAIDLAIDGADEVDPFLNLVKGRGGSLLREKMVEG 141

Query: 665  ASKRFVVIVDDSKMVDRLGCSGNSVPVEIIPFCWGYTLGQLKKLFAGECGFDARLRMTGD 486
            A K+F+VIVD+SK+V+ LG SG ++PVE+I FCW +T  +L+KLF  E G  ARLR  G+
Sbjct: 142  ACKKFIVIVDESKLVNYLGGSGLAMPVEVIKFCWRFTAARLQKLFE-EAGCVARLRTFGE 200

Query: 485  -EKKEPFLTDNSNYIIDLYFENGITRDLNEVSDEILRLTGVIEHGMFLGLASSVIIAGED 309
             EK+EP++TDN N+I+DLYFE  I  DL   SD IL+L GV+EHGMFL +A++VI+AGE 
Sbjct: 201  KEKEEPYVTDNGNFIVDLYFERSI-GDLKAASDAILQLAGVVEHGMFLDMATTVIVAGEL 259

Query: 308  GVTVKNK 288
            G+TVKNK
Sbjct: 260  GLTVKNK 266


>ref|XP_003555942.1| PREDICTED: probable ribose-5-phosphate isomerase-like [Glycine max]
          Length = 265

 Score =  316 bits (810), Expect = 6e-84
 Identities = 166/247 (67%), Positives = 203/247 (82%), Gaps = 4/247 (1%)
 Frame = -2

Query: 1016 HPAAPTS----QDELKRIAAHRAVDLVESGMVLGLGTGSTAVHALDRIGDLLRCGVLHDI 849
            HP++P+S    QD+LK+IAA++AV+ VESGMVLGLGTGSTA HA+DRIG+LLR G L DI
Sbjct: 22   HPSSPSSVILTQDDLKKIAAYKAVEYVESGMVLGLGTGSTAKHAVDRIGELLRQGKLKDI 81

Query: 848  VGIPTSKKTEAHALSVGIPLSDLDRHPSVDLSIDGADEVDPHLNLVKGRGGSLLREKMIE 669
            VGIPTS KT   ALS+GIPLSDLD HP+VDL+IDGADEVDP LNLVKGRGGSLLREKM+E
Sbjct: 82   VGIPTSTKTHDQALSLGIPLSDLDSHPTVDLAIDGADEVDPFLNLVKGRGGSLLREKMVE 141

Query: 668  GASKRFVVIVDDSKMVDRLGCSGNSVPVEIIPFCWGYTLGQLKKLFAGECGFDARLRMTG 489
            GA K+F+VIVD+SK+V+ LG SG ++PVE+I FCW +T  +L+KLF  E G  A+LR T 
Sbjct: 142  GACKKFIVIVDESKLVNYLGGSGLAMPVEVIQFCWRFTAARLQKLFQ-EAGCVAKLR-TF 199

Query: 488  DEKKEPFLTDNSNYIIDLYFENGITRDLNEVSDEILRLTGVIEHGMFLGLASSVIIAGED 309
             EK EP++TDN N+I+DLYFE  I  DL   SD IL+L GV+EHGMFL +A++VI+AGE 
Sbjct: 200  AEKDEPYVTDNGNFIVDLYFERSI-GDLKAASDAILQLAGVVEHGMFLDMATTVIVAGEL 258

Query: 308  GVTVKNK 288
            G+TVKNK
Sbjct: 259  GLTVKNK 265


>tpg|DAA47099.1| TPA: ribose-5-phosphate isomerase [Zea mays]
          Length = 313

 Score =  313 bits (803), Expect = 4e-83
 Identities = 165/251 (65%), Positives = 198/251 (78%), Gaps = 7/251 (2%)
 Frame = -2

Query: 1019 PHPAAPTSQDELKRIAAHRAVDLVESGMVLGLGTGSTAVHALDRIGDLLRCGVLHDIVGI 840
            P P+   +QDELKR+AAHRAV+ VESGM LGLGTGSTA HALDR+GDLLR G L  + G+
Sbjct: 62   PQPSGNLTQDELKRVAAHRAVEFVESGMTLGLGTGSTAAHALDRLGDLLRAGALPGVAGV 121

Query: 839  PTSKKTEAHALSVGIPLSDLD--RHPSVDLSIDGADEVDPHLNLVKGRGGSLLREKMIEG 666
            PTS KTEAHA  VGIPL  LD     S+ LSIDGADEVDP LNLVKGRGGSLLREKMIEG
Sbjct: 122  PTSLKTEAHAARVGIPLLPLDAASGASIRLSIDGADEVDPDLNLVKGRGGSLLREKMIEG 181

Query: 665  ASKRFVVIVDDSKMVDRLGCSGNSVPVEIIPFCWGYTLGQLKKLFAGECGFDARLR---- 498
            A  RFVVIVD+SK+V RLGC+G +VPVE+IPF   +TLG ++K+F G  GF ARLR    
Sbjct: 182  AGDRFVVIVDESKLVPRLGCTG-AVPVEVIPFGAPHTLGLIRKVFDGVPGFHARLRTVPA 240

Query: 497  MTGDEKKEPFLTDNSNYIIDLYFENGITRDLNEVSDEILRLTGVIEHGMFLGLASSVIIA 318
              G++   PFLTDN NYI++++FE+GI  DL ++SD +LR+TGVIEHGMFLG+A++VI+A
Sbjct: 241  ANGEDSDAPFLTDNGNYIVEMFFEDGIRGDLLDISDRLLRITGVIEHGMFLGMATTVIVA 300

Query: 317  GEDG-VTVKNK 288
             +DG VTV NK
Sbjct: 301  NKDGTVTVINK 311


>gb|ACN34846.1| unknown [Zea mays] gi|414868543|tpg|DAA47100.1| TPA:
            ribose-5-phosphate isomerase [Zea mays]
          Length = 580

 Score =  313 bits (803), Expect = 4e-83
 Identities = 165/251 (65%), Positives = 198/251 (78%), Gaps = 7/251 (2%)
 Frame = -2

Query: 1019 PHPAAPTSQDELKRIAAHRAVDLVESGMVLGLGTGSTAVHALDRIGDLLRCGVLHDIVGI 840
            P P+   +QDELKR+AAHRAV+ VESGM LGLGTGSTA HALDR+GDLLR G L  + G+
Sbjct: 8    PQPSGNLTQDELKRVAAHRAVEFVESGMTLGLGTGSTAAHALDRLGDLLRAGALPGVAGV 67

Query: 839  PTSKKTEAHALSVGIPLSDLD--RHPSVDLSIDGADEVDPHLNLVKGRGGSLLREKMIEG 666
            PTS KTEAHA  VGIPL  LD     S+ LSIDGADEVDP LNLVKGRGGSLLREKMIEG
Sbjct: 68   PTSLKTEAHAARVGIPLLPLDAASGASIRLSIDGADEVDPDLNLVKGRGGSLLREKMIEG 127

Query: 665  ASKRFVVIVDDSKMVDRLGCSGNSVPVEIIPFCWGYTLGQLKKLFAGECGFDARLR---- 498
            A  RFVVIVD+SK+V RLGC+G +VPVE+IPF   +TLG ++K+F G  GF ARLR    
Sbjct: 128  AGDRFVVIVDESKLVPRLGCTG-AVPVEVIPFGAPHTLGLIRKVFDGVPGFHARLRTVPA 186

Query: 497  MTGDEKKEPFLTDNSNYIIDLYFENGITRDLNEVSDEILRLTGVIEHGMFLGLASSVIIA 318
              G++   PFLTDN NYI++++FE+GI  DL ++SD +LR+TGVIEHGMFLG+A++VI+A
Sbjct: 187  ANGEDSDAPFLTDNGNYIVEMFFEDGIRGDLLDISDRLLRITGVIEHGMFLGMATTVIVA 246

Query: 317  GEDG-VTVKNK 288
             +DG VTV NK
Sbjct: 247  NKDGTVTVINK 257


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