BLASTX nr result

ID: Dioscorea21_contig00005490 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00005490
         (1084 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004147198.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1...   164   3e-38
ref|XP_002271288.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1...   164   3e-38
ref|XP_002518112.1| conserved hypothetical protein [Ricinus comm...   164   5e-38
ref|NP_001235493.1| uncharacterized protein LOC100499749 [Glycin...   160   4e-37
ref|XP_003549910.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1...   160   5e-37

>ref|XP_004147198.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex
           subunit 8, mitochondrial-like [Cucumis sativus]
           gi|449519396|ref|XP_004166721.1| PREDICTED: NADH
           dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8,
           mitochondrial-like [Cucumis sativus]
          Length = 127

 Score =  164 bits (416), Expect = 3e-38
 Identities = 80/134 (59%), Positives = 94/134 (70%)
 Frame = -2

Query: 972 MAGRLSSAASRIMGGGGVVGRSLPSAFRTRAGMGLPVGKHIVPDKPLPAHDELIWDNGTP 793
           MAG+L++  S+I+GG GVVGRS+ S+ R R+GMGLPVGKHIVPDKPLP +DEL+WDNGTP
Sbjct: 1   MAGKLTNLGSKILGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPENDELVWDNGTP 60

Query: 792 YPEPCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFASIGLLAVWNDKASKIPFAPKV 613
           +PEPC                                FAS+G LAVWNDKASKIPFAPKV
Sbjct: 61  FPEPC---------IDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKV 111

Query: 612 YPYDDLRVELGGEP 571
           YPYD+LRVELGG+P
Sbjct: 112 YPYDNLRVELGGDP 125


>ref|XP_002271288.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex
           subunit 8, mitochondrial isoform 1 [Vitis vinifera]
          Length = 125

 Score =  164 bits (416), Expect = 3e-38
 Identities = 83/134 (61%), Positives = 93/134 (69%)
 Frame = -2

Query: 972 MAGRLSSAASRIMGGGGVVGRSLPSAFRTRAGMGLPVGKHIVPDKPLPAHDELIWDNGTP 793
           MAGRLS+ ASRIMGG GVV RS+ S+   R+GMGLPVGKHIVP+KPLP +DELIWDNGTP
Sbjct: 1   MAGRLSNVASRIMGGSGVVSRSVASSLPLRSGMGLPVGKHIVPNKPLPVNDELIWDNGTP 60

Query: 792 YPEPCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFASIGLLAVWNDKASKIPFAPKV 613
           +PEPC                                FAS+GLLAVWNDKASKIPF P+V
Sbjct: 61  FPEPC---------IDRIAETVGKYEALAWMCGGLSFFASLGLLAVWNDKASKIPFTPRV 111

Query: 612 YPYDDLRVELGGEP 571
           YPYD+LRVELGGEP
Sbjct: 112 YPYDNLRVELGGEP 125


>ref|XP_002518112.1| conserved hypothetical protein [Ricinus communis]
           gi|223542708|gb|EEF44245.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 126

 Score =  164 bits (414), Expect = 5e-38
 Identities = 81/133 (60%), Positives = 92/133 (69%)
 Frame = -2

Query: 969 AGRLSSAASRIMGGGGVVGRSLPSAFRTRAGMGLPVGKHIVPDKPLPAHDELIWDNGTPY 790
           AGRLS+ ASRIMGG GVV RS+ S+ R R+GMGLPVGKHIVPDKPLP ++EL+WDNGTP+
Sbjct: 3   AGRLSNVASRIMGGNGVVSRSIGSSLRLRSGMGLPVGKHIVPDKPLPVNEELVWDNGTPF 62

Query: 789 PEPCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFASIGLLAVWNDKASKIPFAPKVY 610
           PEPC                                FAS+GLLAVWNDKASKIP+ PKVY
Sbjct: 63  PEPC---------IDRIADTVGKYEALAWLCGGLSFFASLGLLAVWNDKASKIPYVPKVY 113

Query: 609 PYDDLRVELGGEP 571
           PYD+LR ELGGEP
Sbjct: 114 PYDNLRAELGGEP 126


>ref|NP_001235493.1| uncharacterized protein LOC100499749 [Glycine max]
           gi|255626255|gb|ACU13472.1| unknown [Glycine max]
          Length = 125

 Score =  160 bits (406), Expect = 4e-37
 Identities = 81/134 (60%), Positives = 93/134 (69%)
 Frame = -2

Query: 972 MAGRLSSAASRIMGGGGVVGRSLPSAFRTRAGMGLPVGKHIVPDKPLPAHDELIWDNGTP 793
           MAGRL++AASRI+GG GVV RS+ S+ R R+GMGLPVGKH VPDKPLP ++EL+WDNGT 
Sbjct: 1   MAGRLTNAASRILGGNGVVYRSVASSLRLRSGMGLPVGKHYVPDKPLPMNEELLWDNGTA 60

Query: 792 YPEPCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFASIGLLAVWNDKASKIPFAPKV 613
           +PEPC                                FAS+GLLAVWNDKASKIPF PKV
Sbjct: 61  FPEPC---------IDRIADTVGKYEALAWLCGGLSFFASLGLLAVWNDKASKIPFTPKV 111

Query: 612 YPYDDLRVELGGEP 571
           YPYD+LRVELGGEP
Sbjct: 112 YPYDNLRVELGGEP 125


>ref|XP_003549910.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex
           subunit 8, mitochondrial-like [Glycine max]
          Length = 125

 Score =  160 bits (405), Expect = 5e-37
 Identities = 81/134 (60%), Positives = 93/134 (69%)
 Frame = -2

Query: 972 MAGRLSSAASRIMGGGGVVGRSLPSAFRTRAGMGLPVGKHIVPDKPLPAHDELIWDNGTP 793
           MAGRL++AASRI+GG GVV RS+ S+ R R+GMGLPVGKH VPDKPLP ++EL+WDNGT 
Sbjct: 1   MAGRLTNAASRILGGNGVVYRSVASSLRLRSGMGLPVGKHYVPDKPLPMNEELLWDNGTA 60

Query: 792 YPEPCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFASIGLLAVWNDKASKIPFAPKV 613
           +PEPC                                FAS+GLLAVWNDKASK PFAPKV
Sbjct: 61  FPEPC---------IDRIADTVGKYEALAWLCGGLSFFASLGLLAVWNDKASKTPFAPKV 111

Query: 612 YPYDDLRVELGGEP 571
           YPYD+LRVELGGEP
Sbjct: 112 YPYDNLRVELGGEP 125


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