BLASTX nr result
ID: Dioscorea21_contig00005485
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00005485 (220 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAL15890.1|AF417302_1 26S proteasome regulatory subunit S12 i... 121 5e-26 ref|XP_002315172.1| predicted protein [Populus trichocarpa] gi|1... 117 1e-24 ref|XP_002279347.1| PREDICTED: eukaryotic translation initiation... 114 6e-24 emb|CAN80292.1| hypothetical protein VITISV_032012 [Vitis vinifera] 114 6e-24 ref|XP_004138431.1| PREDICTED: eukaryotic translation initiation... 113 1e-23 >gb|AAL15890.1|AF417302_1 26S proteasome regulatory subunit S12 isolog-like protein [Castanea sativa] Length = 197 Score = 121 bits (304), Expect = 5e-26 Identities = 59/72 (81%), Positives = 66/72 (91%) Frame = -3 Query: 218 DILKTTMVDKLPNDLEGMEASMERLLALIDDVYKYVDGVVEGNVAPDNNNGRLISDALSS 39 DILKTTMVDKLPNDLEGMEASMERLLALIDDVYKYVD VVEG+VAPDN+ GR IS+ +SS Sbjct: 103 DILKTTMVDKLPNDLEGMEASMERLLALIDDVYKYVDNVVEGHVAPDNSIGRFISETVSS 162 Query: 38 IPKMSPAVFDKV 3 +PK+SP FDK+ Sbjct: 163 LPKLSPPAFDKL 174 >ref|XP_002315172.1| predicted protein [Populus trichocarpa] gi|118484603|gb|ABK94175.1| unknown [Populus trichocarpa] gi|222864212|gb|EEF01343.1| predicted protein [Populus trichocarpa] Length = 287 Score = 117 bits (293), Expect = 1e-24 Identities = 55/72 (76%), Positives = 65/72 (90%) Frame = -3 Query: 218 DILKTTMVDKLPNDLEGMEASMERLLALIDDVYKYVDGVVEGNVAPDNNNGRLISDALSS 39 D+LKTTMVDK+P+DLEGME SM+RLLALIDDVYKYVD VVEG+ APDNN GR ISD ++S Sbjct: 181 DVLKTTMVDKIPSDLEGMEISMQRLLALIDDVYKYVDDVVEGHTAPDNNIGRFISDTVAS 240 Query: 38 IPKMSPAVFDKV 3 +PK+SP VFDK+ Sbjct: 241 LPKLSPPVFDKL 252 >ref|XP_002279347.1| PREDICTED: eukaryotic translation initiation factor 3 subunit F [Vitis vinifera] gi|296086088|emb|CBI31529.3| unnamed protein product [Vitis vinifera] Length = 285 Score = 114 bits (286), Expect = 6e-24 Identities = 55/72 (76%), Positives = 64/72 (88%) Frame = -3 Query: 218 DILKTTMVDKLPNDLEGMEASMERLLALIDDVYKYVDGVVEGNVAPDNNNGRLISDALSS 39 DILKTTMV+KLP+DLEGMEASMERLLALIDDVYKYVD VVEG V PDN+ GR I+D ++S Sbjct: 179 DILKTTMVEKLPSDLEGMEASMERLLALIDDVYKYVDSVVEGQVVPDNDIGRFIADTVAS 238 Query: 38 IPKMSPAVFDKV 3 IPK+SP FD++ Sbjct: 239 IPKISPPAFDRL 250 >emb|CAN80292.1| hypothetical protein VITISV_032012 [Vitis vinifera] Length = 354 Score = 114 bits (286), Expect = 6e-24 Identities = 55/72 (76%), Positives = 64/72 (88%) Frame = -3 Query: 218 DILKTTMVDKLPNDLEGMEASMERLLALIDDVYKYVDGVVEGNVAPDNNNGRLISDALSS 39 DILKTTMV+KLP+DLEGMEASMERLLALIDDVYKYVD VVEG V PDN+ GR I+D ++S Sbjct: 248 DILKTTMVEKLPSDLEGMEASMERLLALIDDVYKYVDSVVEGQVVPDNDIGRFIADTVAS 307 Query: 38 IPKMSPAVFDKV 3 IPK+SP FD++ Sbjct: 308 IPKISPPAFDRL 319 >ref|XP_004138431.1| PREDICTED: eukaryotic translation initiation factor 3 subunit F-like [Cucumis sativus] gi|449517876|ref|XP_004165970.1| PREDICTED: eukaryotic translation initiation factor 3 subunit F-like [Cucumis sativus] Length = 285 Score = 113 bits (283), Expect = 1e-23 Identities = 53/72 (73%), Positives = 63/72 (87%) Frame = -3 Query: 218 DILKTTMVDKLPNDLEGMEASMERLLALIDDVYKYVDGVVEGNVAPDNNNGRLISDALSS 39 DILKTT +DKLPNDLEGMEASMERLLALIDD+YKYVD VVEG+V DN GR ++D ++S Sbjct: 179 DILKTTSIDKLPNDLEGMEASMERLLALIDDIYKYVDNVVEGHVEADNTIGRFLADTVAS 238 Query: 38 IPKMSPAVFDKV 3 +PK+SPA FDK+ Sbjct: 239 LPKLSPAAFDKL 250