BLASTX nr result

ID: Dioscorea21_contig00005475 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00005475
         (323 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002452679.1| hypothetical protein SORBIDRAFT_04g030520 [S...    99   4e-19
gb|ACN36784.1| unknown [Zea mays]                                      96   4e-18
ref|NP_001147799.1| LOC100281409 [Zea mays] gi|195613810|gb|ACG2...    96   4e-18
ref|NP_001047869.1| Os02g0705600 [Oryza sativa Japonica Group] g...    94   9e-18
gb|EEE57653.1| hypothetical protein OsJ_08086 [Oryza sativa Japo...    94   9e-18

>ref|XP_002452679.1| hypothetical protein SORBIDRAFT_04g030520 [Sorghum bicolor]
           gi|241932510|gb|EES05655.1| hypothetical protein
           SORBIDRAFT_04g030520 [Sorghum bicolor]
          Length = 664

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 53/102 (51%), Positives = 73/102 (71%)
 Frame = +3

Query: 12  ISKLVPQTSCRKFAEKCMRILRNLSETEEGVLMIAETNGCIASIAELLDNGNLDEQEHAV 191
           ISKLVP  +   F E C++ILRNLS+ EE V+ I  T+ C+AS+AE LD G+  E+EHAV
Sbjct: 498 ISKLVPIFTEGNFVECCLKILRNLSDMEEAVVRITRTDRCLASVAEYLDTGSPTEREHAV 557

Query: 192 VILHSLCLHNSSDHLLQVKCEDVIPSLCVISQNGTTKARECS 317
           VIL ++C +++ D LL +K E VIP+L  +S NGT +A+ CS
Sbjct: 558 VILLAICSYSAEDCLLVMK-EGVIPALVDLSVNGTEEAKNCS 598


>gb|ACN36784.1| unknown [Zea mays]
          Length = 171

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 52/102 (50%), Positives = 71/102 (69%)
 Frame = +3

Query: 12  ISKLVPQTSCRKFAEKCMRILRNLSETEEGVLMIAETNGCIASIAELLDNGNLDEQEHAV 191
           ISKLVP  +   F E+C+ ILRNLS+ EE V  I  T+ C+AS+AE LD G+  E++HAV
Sbjct: 4   ISKLVPILTEGNFVERCLEILRNLSDMEEAVARITRTDRCLASVAEYLDTGSPTERQHAV 63

Query: 192 VILHSLCLHNSSDHLLQVKCEDVIPSLCVISQNGTTKARECS 317
           VIL ++C  ++ D LL +K E VIP+L  +S NGT +A+ CS
Sbjct: 64  VILLAVCSCSAEDCLLVMK-EGVIPALVDLSVNGTEEAKGCS 104


>ref|NP_001147799.1| LOC100281409 [Zea mays] gi|195613810|gb|ACG28735.1|
           ubiquitin-protein ligase [Zea mays]
           gi|413938473|gb|AFW73024.1| ubiquitin-protein ligase
           isoform 1 [Zea mays] gi|413938474|gb|AFW73025.1|
           ubiquitin-protein ligase isoform 2 [Zea mays]
          Length = 773

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 52/102 (50%), Positives = 71/102 (69%)
 Frame = +3

Query: 12  ISKLVPQTSCRKFAEKCMRILRNLSETEEGVLMIAETNGCIASIAELLDNGNLDEQEHAV 191
           ISKLVP  +   F E+C+ ILRNLS+ EE V  I  T+ C+AS+AE LD G+  E++HAV
Sbjct: 606 ISKLVPILTEGNFVERCLEILRNLSDMEEAVARITRTDRCLASVAEYLDTGSPTERQHAV 665

Query: 192 VILHSLCLHNSSDHLLQVKCEDVIPSLCVISQNGTTKARECS 317
           VIL ++C  ++ D LL +K E VIP+L  +S NGT +A+ CS
Sbjct: 666 VILLAVCSCSAEDCLLVMK-EGVIPALVDLSVNGTEEAKGCS 706


>ref|NP_001047869.1| Os02g0705600 [Oryza sativa Japonica Group]
           gi|41053097|dbj|BAD08040.1| armadillo repeat containing
           protein-like [Oryza sativa Japonica Group]
           gi|113537400|dbj|BAF09783.1| Os02g0705600 [Oryza sativa
           Japonica Group] gi|215678778|dbj|BAG95215.1| unnamed
           protein product [Oryza sativa Japonica Group]
          Length = 770

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 50/103 (48%), Positives = 71/103 (68%)
 Frame = +3

Query: 12  ISKLVPQTSCRKFAEKCMRILRNLSETEEGVLMIAETNGCIASIAELLDNGNLDEQEHAV 191
           +S+L P  S   FAE C+ ILRNL + EE  ++I +T+ C+ S+AE LD G+  E+EHAV
Sbjct: 604 VSRLSPILSEGTFAECCLEILRNLCDVEEATVLITKTDRCLGSVAEYLDTGSPKEREHAV 663

Query: 192 VILHSLCLHNSSDHLLQVKCEDVIPSLCVISQNGTTKARECSV 320
           VIL ++C H+S D LL +K E VIP+L  +S NG  +A+ CS+
Sbjct: 664 VILLAVCSHSSEDCLLVMK-EGVIPALVDLSVNGIDEAKGCSM 705


>gb|EEE57653.1| hypothetical protein OsJ_08086 [Oryza sativa Japonica Group]
          Length = 843

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 50/103 (48%), Positives = 71/103 (68%)
 Frame = +3

Query: 12  ISKLVPQTSCRKFAEKCMRILRNLSETEEGVLMIAETNGCIASIAELLDNGNLDEQEHAV 191
           +S+L P  S   FAE C+ ILRNL + EE  ++I +T+ C+ S+AE LD G+  E+EHAV
Sbjct: 677 VSRLSPILSEGTFAECCLEILRNLCDVEEATVLITKTDRCLGSVAEYLDTGSPKEREHAV 736

Query: 192 VILHSLCLHNSSDHLLQVKCEDVIPSLCVISQNGTTKARECSV 320
           VIL ++C H+S D LL +K E VIP+L  +S NG  +A+ CS+
Sbjct: 737 VILLAVCSHSSEDCLLVMK-EGVIPALVDLSVNGIDEAKGCSM 778


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