BLASTX nr result

ID: Dioscorea21_contig00005470 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00005470
         (431 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002451641.1| hypothetical protein SORBIDRAFT_04g005070 [S...   120   9e-26
ref|NP_001150164.1| fiber protein Fb15 [Zea mays] gi|195637274|g...   116   2e-24
ref|XP_003570425.1| PREDICTED: uncharacterized protein LOC100841...   113   1e-23
gb|AAS21008.1| fiber protein [Hyacinthus orientalis]                  107   8e-22
dbj|BAD27614.1| putative fiber protein Fb15 [Oryza sativa Japoni...   106   2e-21

>ref|XP_002451641.1| hypothetical protein SORBIDRAFT_04g005070 [Sorghum bicolor]
           gi|241931472|gb|EES04617.1| hypothetical protein
           SORBIDRAFT_04g005070 [Sorghum bicolor]
          Length = 91

 Score =  120 bits (302), Expect = 9e-26
 Identities = 55/72 (76%), Positives = 65/72 (90%)
 Frame = -1

Query: 386 MAMRAFYNEIRGMRLRELPAYLKPSFSLENIKKSADQAVDRYIEKYIETSSVEPLFHVCI 207
           MA+RA YNEIRGM++RE+PAYLKP  + +N+KKSADQAVDRYIEKYI+TSS +PLFHVC 
Sbjct: 1   MALRALYNEIRGMKVREVPAYLKPRLTWDNVKKSADQAVDRYIEKYIDTSSPDPLFHVCF 60

Query: 206 GGMIFSYLVALP 171
           GGM+FSYLV LP
Sbjct: 61  GGMVFSYLVNLP 72


>ref|NP_001150164.1| fiber protein Fb15 [Zea mays] gi|195637274|gb|ACG38105.1| fiber
           protein Fb15 [Zea mays] gi|413935799|gb|AFW70350.1|
           fiber protein Fb15 [Zea mays]
          Length = 91

 Score =  116 bits (291), Expect = 2e-24
 Identities = 53/72 (73%), Positives = 64/72 (88%)
 Frame = -1

Query: 386 MAMRAFYNEIRGMRLRELPAYLKPSFSLENIKKSADQAVDRYIEKYIETSSVEPLFHVCI 207
           MA+RA YNEIR M++R++PAYLKP  + +N+KKSADQAVDRYIEKYI+TSS +PL+HVCI
Sbjct: 1   MALRALYNEIRSMKVRDVPAYLKPRLTWDNVKKSADQAVDRYIEKYIDTSSPDPLYHVCI 60

Query: 206 GGMIFSYLVALP 171
           GGMIFSY V LP
Sbjct: 61  GGMIFSYFVNLP 72


>ref|XP_003570425.1| PREDICTED: uncharacterized protein LOC100841437 isoform 1
           [Brachypodium distachyon]
           gi|357137677|ref|XP_003570426.1| PREDICTED:
           uncharacterized protein LOC100841437 isoform 2
           [Brachypodium distachyon]
          Length = 88

 Score =  113 bits (283), Expect = 1e-23
 Identities = 52/72 (72%), Positives = 60/72 (83%)
 Frame = -1

Query: 386 MAMRAFYNEIRGMRLRELPAYLKPSFSLENIKKSADQAVDRYIEKYIETSSVEPLFHVCI 207
           MA+RA YNEIR M++RE+PAYLKP  +  N+KKS DQAVDRYIEKYIET S +P+FHVC 
Sbjct: 1   MALRALYNEIRAMKVREVPAYLKPRLTWGNVKKSTDQAVDRYIEKYIETGSADPIFHVCF 60

Query: 206 GGMIFSYLVALP 171
           GGM FSYLV LP
Sbjct: 61  GGMAFSYLVNLP 72


>gb|AAS21008.1| fiber protein [Hyacinthus orientalis]
          Length = 135

 Score =  107 bits (268), Expect = 8e-22
 Identities = 50/63 (79%), Positives = 58/63 (92%)
 Frame = -1

Query: 359 IRGMRLRELPAYLKPSFSLENIKKSADQAVDRYIEKYIETSSVEPLFHVCIGGMIFSYLV 180
           I+G+++RELPA++KP  S  NIKK+ DQAVDRYIEKYI+TSSVEPLFHVCIGGMIFSYLV
Sbjct: 9   IKGLKVRELPAHVKPKLSWTNIKKTTDQAVDRYIEKYIDTSSVEPLFHVCIGGMIFSYLV 68

Query: 179 ALP 171
           ALP
Sbjct: 69  ALP 71


>dbj|BAD27614.1| putative fiber protein Fb15 [Oryza sativa Japonica Group]
           gi|125538299|gb|EAY84694.1| hypothetical protein
           OsI_06064 [Oryza sativa Indica Group]
           gi|125581003|gb|EAZ21934.1| hypothetical protein
           OsJ_05587 [Oryza sativa Japonica Group]
           gi|215764954|dbj|BAG86651.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215767695|dbj|BAG99923.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 95

 Score =  106 bits (265), Expect = 2e-21
 Identities = 51/72 (70%), Positives = 60/72 (83%)
 Frame = -1

Query: 386 MAMRAFYNEIRGMRLRELPAYLKPSFSLENIKKSADQAVDRYIEKYIETSSVEPLFHVCI 207
           MA+RA  +EIRGM++RE+P YLKP  S EN+KKS+DQAVDRYI+KYIETSS EPLFHV  
Sbjct: 1   MALRALISEIRGMKVREVPGYLKPRLSWENVKKSSDQAVDRYIDKYIETSSPEPLFHVIY 60

Query: 206 GGMIFSYLVALP 171
           G M FSYL+ LP
Sbjct: 61  GLMAFSYLINLP 72


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