BLASTX nr result

ID: Dioscorea21_contig00005439 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00005439
         (1147 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002448618.1| hypothetical protein SORBIDRAFT_06g030260 [S...   279   1e-72
dbj|BAJ97717.1| predicted protein [Hordeum vulgare subsp. vulgare]    278   1e-72
ref|XP_003580651.1| PREDICTED: shikimate kinase, chloroplastic-l...   278   2e-72
ref|NP_001130232.1| hypothetical protein [Zea mays] gi|194688616...   276   5e-72
ref|NP_001149678.1| shikimate kinase [Zea mays] gi|194700058|gb|...   276   9e-72

>ref|XP_002448618.1| hypothetical protein SORBIDRAFT_06g030260 [Sorghum bicolor]
           gi|241939801|gb|EES12946.1| hypothetical protein
           SORBIDRAFT_06g030260 [Sorghum bicolor]
          Length = 300

 Score =  279 bits (713), Expect = 1e-72
 Identities = 135/173 (78%), Positives = 158/173 (91%)
 Frame = -3

Query: 524 AVGSENVHAFVDEALVIKRKSEDVAPYLNGRCIYLVGMMGSGKTTVGKILSEVLGYSFFD 345
           + G+  VH   DEAL++++K++DV PYL+GRC+YLVGMMGSGKTTVGKIL+EVLGYSFFD
Sbjct: 75  SAGTGKVHYSTDEALILQQKAQDVLPYLDGRCVYLVGMMGSGKTTVGKILAEVLGYSFFD 134

Query: 344 SDKLVEQSVGMSSVAQIFQERSEAFFRDSESEVLRDLSTMHRLVVATGGGAVIRPINWKY 165
           SDKLVE++VG+SSVA+IFQ  SEAFFRD+ESEVLRDLS+MHRLVVATGGGAVIRPINW Y
Sbjct: 135 SDKLVEKAVGISSVAEIFQLHSEAFFRDNESEVLRDLSSMHRLVVATGGGAVIRPINWSY 194

Query: 164 MKHGITVWLDVPLEALARRIAAVGTASRPLLHQEPGDPFTKAFTRLTTLAEQR 6
           MK G+TVWLDVPL+ALARRIAAVGTASRPLLHQE GDP+ KA+ +LT+L EQR
Sbjct: 195 MKKGLTVWLDVPLDALARRIAAVGTASRPLLHQESGDPYAKAYAKLTSLFEQR 247


>dbj|BAJ97717.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 301

 Score =  278 bits (712), Expect = 1e-72
 Identities = 134/171 (78%), Positives = 154/171 (90%)
 Frame = -3

Query: 518 GSENVHAFVDEALVIKRKSEDVAPYLNGRCIYLVGMMGSGKTTVGKILSEVLGYSFFDSD 339
           G+E VH   DEALV+K+K+EDV PYLN RC+YLVGMMGSGKTTVGKI++EVLGYSFFDSD
Sbjct: 78  GTEKVHYSADEALVLKQKAEDVLPYLNDRCVYLVGMMGSGKTTVGKIIAEVLGYSFFDSD 137

Query: 338 KLVEQSVGMSSVAQIFQERSEAFFRDSESEVLRDLSTMHRLVVATGGGAVIRPINWKYMK 159
           KLVEQSVG+ SVA+IFQ  SEAFFRD+ESEVLRDLS+MHRL+VATGGGAVIRPINW YM+
Sbjct: 138 KLVEQSVGIPSVAEIFQVHSEAFFRDNESEVLRDLSSMHRLIVATGGGAVIRPINWSYMR 197

Query: 158 HGITVWLDVPLEALARRIAAVGTASRPLLHQEPGDPFTKAFTRLTTLAEQR 6
            G+T+WLDVP++ALARRIAAVGTASRPLLH E GDP+ KA+ +L TL EQR
Sbjct: 198 KGLTIWLDVPVDALARRIAAVGTASRPLLHHESGDPYAKAYAKLATLFEQR 248


>ref|XP_003580651.1| PREDICTED: shikimate kinase, chloroplastic-like [Brachypodium
           distachyon]
          Length = 298

 Score =  278 bits (710), Expect = 2e-72
 Identities = 135/174 (77%), Positives = 156/174 (89%)
 Frame = -3

Query: 527 SAVGSENVHAFVDEALVIKRKSEDVAPYLNGRCIYLVGMMGSGKTTVGKILSEVLGYSFF 348
           SA G+E VH   DEAL++K+K+EDV P LN RC+YLVGMMGSGKTTVGKI++EVLGYSFF
Sbjct: 72  SAAGTEKVHYSADEALILKQKAEDVLPCLNDRCVYLVGMMGSGKTTVGKIIAEVLGYSFF 131

Query: 347 DSDKLVEQSVGMSSVAQIFQERSEAFFRDSESEVLRDLSTMHRLVVATGGGAVIRPINWK 168
           DSDKLVEQ+VG+SSVA+IFQ  SEAFFRD+ESEVLRDLS+MHRLVVATGGGAVIRPINW 
Sbjct: 132 DSDKLVEQAVGISSVAEIFQVHSEAFFRDNESEVLRDLSSMHRLVVATGGGAVIRPINWS 191

Query: 167 YMKHGITVWLDVPLEALARRIAAVGTASRPLLHQEPGDPFTKAFTRLTTLAEQR 6
           YM+ G+T+WLDVPL+ALARRIAAVGTASRPLLHQE GD + KA+ +LT L E+R
Sbjct: 192 YMRKGLTIWLDVPLDALARRIAAVGTASRPLLHQESGDTYAKAYAKLTALLEKR 245


>ref|NP_001130232.1| hypothetical protein [Zea mays] gi|194688616|gb|ACF78392.1| unknown
           [Zea mays] gi|223973151|gb|ACN30763.1| unknown [Zea
           mays] gi|414585206|tpg|DAA35777.1| TPA: hypothetical
           protein ZEAMMB73_776202 [Zea mays]
          Length = 293

 Score =  276 bits (707), Expect = 5e-72
 Identities = 135/174 (77%), Positives = 157/174 (90%)
 Frame = -3

Query: 527 SAVGSENVHAFVDEALVIKRKSEDVAPYLNGRCIYLVGMMGSGKTTVGKILSEVLGYSFF 348
           SA G+  VH   D+AL++++K++DV PYL+GRC+YLVGMMGSGKTTVGKILSEVLGYSFF
Sbjct: 67  SAGGTGKVHYSADDALILQQKAQDVLPYLDGRCVYLVGMMGSGKTTVGKILSEVLGYSFF 126

Query: 347 DSDKLVEQSVGMSSVAQIFQERSEAFFRDSESEVLRDLSTMHRLVVATGGGAVIRPINWK 168
           DSDKLVE++VG+SSVA+IFQ  SE FFRD+ESEVL DLS+MHRLVVATGGGAVIRPINW 
Sbjct: 127 DSDKLVEKAVGISSVAEIFQLHSETFFRDNESEVLTDLSSMHRLVVATGGGAVIRPINWS 186

Query: 167 YMKHGITVWLDVPLEALARRIAAVGTASRPLLHQEPGDPFTKAFTRLTTLAEQR 6
           YMK G+TVWLDVPL+ALARRIAAVGTASRPLLHQE GDP+ KA+ +LT+L EQR
Sbjct: 187 YMKKGLTVWLDVPLDALARRIAAVGTASRPLLHQESGDPYAKAYAKLTSLFEQR 240


>ref|NP_001149678.1| shikimate kinase [Zea mays] gi|194700058|gb|ACF84113.1| unknown
           [Zea mays] gi|194700758|gb|ACF84463.1| unknown [Zea
           mays] gi|195629356|gb|ACG36319.1| shikimate kinase [Zea
           mays] gi|413924549|gb|AFW64481.1| Shikimate kinase [Zea
           mays]
          Length = 303

 Score =  276 bits (705), Expect = 9e-72
 Identities = 138/175 (78%), Positives = 157/175 (89%)
 Frame = -3

Query: 527 SAVGSENVHAFVDEALVIKRKSEDVAPYLNGRCIYLVGMMGSGKTTVGKILSEVLGYSFF 348
           S+ G EN+H  VDEAL++KRKSE+V  YLNGRCIYLVGMMGSGK+TVGKI+SEVLGYSFF
Sbjct: 61  SSGGHENLHNSVDEALLLKRKSEEVLFYLNGRCIYLVGMMGSGKSTVGKIMSEVLGYSFF 120

Query: 347 DSDKLVEQSVGMSSVAQIFQERSEAFFRDSESEVLRDLSTMHRLVVATGGGAVIRPINWK 168
           DSDKLVEQ+VGM SVAQIF+  SEAFFRD+ES VLRDLS+M RLVVATGGGAVIRP+NWK
Sbjct: 121 DSDKLVEQAVGMPSVAQIFKVHSEAFFRDNESSVLRDLSSMRRLVVATGGGAVIRPVNWK 180

Query: 167 YMKHGITVWLDVPLEALARRIAAVGTASRPLLHQEPGDPFTKAFTRLTTLAEQRG 3
           YMK G++VWLDVPL+ALARRIA VGTASRPLL Q  GDP+T AF++L+ LAEQRG
Sbjct: 181 YMKKGLSVWLDVPLDALARRIAKVGTASRPLLDQPSGDPYTMAFSKLSMLAEQRG 235


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