BLASTX nr result

ID: Dioscorea21_contig00005425 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00005425
         (834 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003571011.1| PREDICTED: NEP1-interacting protein-like 2-l...    89   1e-15
ref|XP_003634293.1| PREDICTED: RING-H2 finger protein ATL48-like...    86   1e-14
ref|XP_002511421.1| conserved hypothetical protein [Ricinus comm...    82   1e-13
gb|AFW76900.1| putative RING zinc finger domain superfamily prot...    81   3e-13
ref|XP_003633831.1| PREDICTED: E3 ubiquitin-protein ligase ATL42...    81   3e-13

>ref|XP_003571011.1| PREDICTED: NEP1-interacting protein-like 2-like [Brachypodium
           distachyon]
          Length = 185

 Score = 89.0 bits (219), Expect = 1e-15
 Identities = 38/73 (52%), Positives = 48/73 (65%), Gaps = 6/73 (8%)
 Frame = +3

Query: 294 GLSTKDLKLLPCLKYSRASMGASD------CPICLEAFRNWDRVRVIPGCGHEFHAPCVD 455
           GLST DL+LLPC  YS     ++       C +CLE  R  +R R +P CGH FHA CVD
Sbjct: 105 GLSTADLRLLPCFAYSSCDASSTSSSSPRLCAVCLETARAGERWRALPACGHAFHAACVD 164

Query: 456 KWLVKTPACPICR 494
           +WLV++PACP+CR
Sbjct: 165 RWLVRSPACPVCR 177


>ref|XP_003634293.1| PREDICTED: RING-H2 finger protein ATL48-like [Vitis vinifera]
          Length = 146

 Score = 85.5 bits (210), Expect = 1e-14
 Identities = 36/72 (50%), Positives = 47/72 (65%), Gaps = 5/72 (6%)
 Frame = +3

Query: 294 GLSTKDLKLLPCLKYS-----RASMGASDCPICLEAFRNWDRVRVIPGCGHEFHAPCVDK 458
           G+S  +LK LPC +Y      +AS    DC +CLE FR  D+ R++P C H FH+ C+D 
Sbjct: 48  GMSQDELKKLPCFEYKAVALEKASNSPVDCAVCLENFRKGDKCRLLPNCKHFFHSQCIDS 107

Query: 459 WLVKTPACPICR 494
           WL+KTP CPICR
Sbjct: 108 WLLKTPICPICR 119


>ref|XP_002511421.1| conserved hypothetical protein [Ricinus communis]
           gi|223550536|gb|EEF52023.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 189

 Score = 82.4 bits (202), Expect = 1e-13
 Identities = 34/69 (49%), Positives = 45/69 (65%), Gaps = 3/69 (4%)
 Frame = +3

Query: 297 LSTKDLKLLPCLKYSRASM---GASDCPICLEAFRNWDRVRVIPGCGHEFHAPCVDKWLV 467
           +S ++LK LPC  Y  A      +SDC +CLE F   D+ +++P C H FH+ C+D WLV
Sbjct: 56  ISNEELKNLPCFDYKAAEKEGSSSSDCVVCLENFNVGDKCKLLPNCKHSFHSQCIDSWLV 115

Query: 468 KTPACPICR 494
           KTP CPICR
Sbjct: 116 KTPICPICR 124


>gb|AFW76900.1| putative RING zinc finger domain superfamily protein [Zea mays]
          Length = 172

 Score = 80.9 bits (198), Expect = 3e-13
 Identities = 36/69 (52%), Positives = 45/69 (65%), Gaps = 2/69 (2%)
 Frame = +3

Query: 294 GLSTKDLKLLPCLKYSRASMGAS--DCPICLEAFRNWDRVRVIPGCGHEFHAPCVDKWLV 467
           GLS+ +L  LPC +Y +A+      DC +CLEAF   DR R +P C H FHA CVD WL 
Sbjct: 62  GLSSGELATLPCHEYFKAAADGETGDCAVCLEAFEAGDRCRQLPRCEHSFHAECVDSWLR 121

Query: 468 KTPACPICR 494
           K+ ACP+CR
Sbjct: 122 KSSACPVCR 130


>ref|XP_003633831.1| PREDICTED: E3 ubiquitin-protein ligase ATL42-like [Vitis vinifera]
          Length = 188

 Score = 80.9 bits (198), Expect = 3e-13
 Identities = 34/69 (49%), Positives = 44/69 (63%), Gaps = 3/69 (4%)
 Frame = +3

Query: 297 LSTKDLKLLPCLKYSRASMGAS---DCPICLEAFRNWDRVRVIPGCGHEFHAPCVDKWLV 467
           +S  DL  LPC  +     G+S   DC +CL+ F+  D+ R++P C H FHA CVD WL+
Sbjct: 49  MSLDDLDKLPCFHFQAKEKGSSSPVDCAVCLDNFKMGDKCRLLPLCNHSFHAQCVDSWLL 108

Query: 468 KTPACPICR 494
           KTP CPICR
Sbjct: 109 KTPICPICR 117


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