BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00005422
         (5013 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280293.2| PREDICTED: endoribonuclease Dicer homolog 3a...  1795   0.0  
emb|CBI20740.3| unnamed protein product [Vitis vinifera]             1781   0.0  
ref|XP_004158269.1| PREDICTED: LOW QUALITY PROTEIN: endoribonucl...  1636   0.0  
ref|NP_001045148.1| Os01g0909200 [Oryza sativa Japonica Group] g...  1627   0.0  
gb|AEC12444.1| ribonuclease III family protein DCL3 [Gossypium h...  1605   0.0  

>ref|XP_002280293.2| PREDICTED: endoribonuclease Dicer homolog 3a-like [Vitis vinifera]
          Length = 1648

 Score = 1795 bits (4648), Expect = 0.0
 Identities = 944/1618 (58%), Positives = 1159/1618 (71%), Gaps = 23/1618 (1%)
 Frame = -2

Query: 5012 DFEPRSYQVEVFDVAVRRNTIAVLDTGAGKTMIAVMLIRHFIDEAMATGDGRRVVFLAPT 4833
            +  PRSYQ +VF+VA RRNTIAVLDTG GKTMIA+MLIR       A G    ++FLAPT
Sbjct: 43   ELSPRSYQWKVFEVAKRRNTIAVLDTGTGKTMIALMLIREIGQAVKADGRKLFIIFLAPT 102

Query: 4832 VHLVTQQYEVIKLHTGLEVECYYGAKGVDDWNVERWEKEISSNQVLVMTPQILLDAFRNA 4653
            VHLV QQ++VIK  TG EVE YYGAKGVD+W+ + WEKEIS + VLVMTPQILLDA R A
Sbjct: 103  VHLVNQQFKVIKDSTGFEVEEYYGAKGVDEWSAKSWEKEISEHDVLVMTPQILLDALRKA 162

Query: 4652 FLKLDMVHLLIFDECHRATGGHPYSRILKEFYHNSTGKPHVFGMTASPVIRKGVSSALDC 4473
            FL L+ V L+I DECHRATG HPY++I+KEFYH S  KP +FGMTASPVIRKGVSS++DC
Sbjct: 163  FLSLETVCLMIVDECHRATGNHPYTKIMKEFYHKSVDKPKIFGMTASPVIRKGVSSSMDC 222

Query: 4472 ENQISELESVLDSKVFTVRDRSEIDLFVPEAKYVNKYYNRMVFTHEGLKMKLGSIWNKCD 4293
            ENQISELES+LD +++T+ DR+E+++F+P AK +N++Y+   F +  LK KL S W+K D
Sbjct: 223  ENQISELESILDCQIYTIEDRTELEVFIPSAKEINRFYDASQFHNLDLKAKLKSSWSKFD 282

Query: 4292 ALMAHLQEKTLDQYKDAHDMIKTSRKRLSSSHAKICHCLDDLGLICALEAAKVCMEVLSL 4113
             L+ +LQ   + QYKD  D +K  RKRLS+ HAKI +CLDDLGLICA EA KVC+E +S 
Sbjct: 283  NLLLNLQGSPMTQYKDMDDKLKALRKRLSNDHAKILYCLDDLGLICAYEAVKVCIENVSN 342

Query: 4112 PSECCEFSVETYDVDKSFTEEALSTIAESLPNDYESLLKTEDGCLGAIQFGYISPKLHEL 3933
              E  EF  ++    K F +E L  I   LP+   + L +E   L A+  GYI+PKLHEL
Sbjct: 343  AQEEFEFYRQSSSQCKCFLQEVLGIIGGYLPHGDGNYLNSESDILKAVDKGYITPKLHEL 402

Query: 3932 IKIFQSLGILNQVQCLIFVERIITSKVIERFIRKISYLSHFTVSYLTGGSSSADALTPKM 3753
            +++FQS G+  +V CLIFVERIIT+KVIERFI+KI YLSHFTVSYLTG +SS DAL PK 
Sbjct: 403  LQLFQSFGVARKVLCLIFVERIITAKVIERFIKKIIYLSHFTVSYLTGSNSSVDALAPKA 462

Query: 3752 QKETLDSFRSRKVNLLFTTDVAEEGIHVPDCSCVIRFDLPKTVRSYVQSCGRARTADSQF 3573
            Q+ETL+SFRS KVNLLF TDV EEGIHVP+CSCVIRFDLPKTVRSYVQS GRAR +DSQF
Sbjct: 463  QRETLESFRSGKVNLLFATDVVEEGIHVPNCSCVIRFDLPKTVRSYVQSRGRARQSDSQF 522

Query: 3572 VIMLERGNIQQRELLFDIIRSRHSMITTALNRDADAWNSKVTFNETIESYHVESTGASLT 3393
            +IMLERGN +QR+ LFDIIRS +SM  TA NRD D +  K    E ++SY V+STGAS+T
Sbjct: 523  IIMLERGNTEQRDQLFDIIRSEYSMTDTATNRDPDGYTLKAYTIEEMDSYFVDSTGASVT 582

Query: 3392 ADSSISLIYRYCGKLPRDKYFTPKPVFQFSMYNGCFQCTLTLPPTAAFQTILGPIGGNSH 3213
            ADSS+SLI+RYC KLP DKYFTPKP F F+   G ++C LTLPP AAFQTI+GP   NSH
Sbjct: 583  ADSSVSLIHRYCEKLPGDKYFTPKPFFHFTYLEGMYECKLTLPPNAAFQTIIGPGNKNSH 642

Query: 3212 IAKQLVCLAACKKLHNLGALNDHLLPVIKEHTEVEVDEKEKASASGAGTKKRKELHSTAT 3033
            ++KQLVCL ACKKLH +GAL+DHLLP ++E +E ++  K K SA+GAGT KRKELH T  
Sbjct: 643  LSKQLVCLEACKKLHQMGALDDHLLPYVEEPSENDIIVKSKGSAAGAGTTKRKELHGTTQ 702

Query: 3032 ISSLSGTWANKRDGIILQGYNLTFSCDLVGQYYCSFILLVDAILDEDVACTEMDLYLLNK 2853
              +LSGTW +K DG I Q Y + FSC++V + Y  F+LL+++ LD+DV   EM+LYL++K
Sbjct: 703  TCALSGTWGDKIDGAIFQAYKIDFSCNIVNELYSGFVLLIESKLDDDVGNIEMELYLISK 762

Query: 2852 MAKAYVRPCGPVTLDMEQVEQAKLFQEFFFNGLFGKLFTGSKSGG-QRKFLLNNKE-SLW 2679
              +  V  CG V+LD EQV +A  F E FFN LFG+LF GSKS G +R+FLLN ++ SLW
Sbjct: 763  FVRTSVSSCGQVSLDAEQVMKAMRFHELFFNSLFGRLFIGSKSSGVRREFLLNTQQKSLW 822

Query: 2678 STSNMYLLLPLETSVIGLNESVNIYWKAIRATVSVVEFM--RNIYSSGAEFSEALNSCPS 2505
            S+SNMYLLLP+E+S I  +ES  I W  I +  SVVEF+  R+  S+G    +  N  P 
Sbjct: 823  SSSNMYLLLPIESSNIPSDESWRINWPGINSCASVVEFLEKRSQLSTGNMNDDTGNPSPC 882

Query: 2504 -----RTECGASDMIHLADKSVDQRSLKDMVVLAIHTGKIYSVLDVISNSSADSPFDGNS 2340
                  TEC +   +HLA+ SV   +LK+MVVLAIHTG+IYS+LDV+ ++SA+SPFDG++
Sbjct: 883  STGLVETECKSISTVHLANNSVHVNNLKNMVVLAIHTGRIYSILDVVIDTSAESPFDGSA 942

Query: 2339 D--KSVWMTFSDYFKKKYGIVLQHSGQPLLLLKQSHNPHNLL----SSKSKCKGDKRTNN 2178
            D   S + TF++YF  KYGIVL + GQPLLLLKQSHN HNLL       +   G K  N 
Sbjct: 943  DVNSSNYTTFAEYFNNKYGIVLMYPGQPLLLLKQSHNAHNLLVNFNDEDALQTGQKMLNE 1002

Query: 2177 GGQNHVHMPPELVAHIDVPINVLKSFYLLPSLMHRLESLMLASQLRKEITFNYXXXXXXX 1998
              Q HVHMPPEL+  I+VPI VLKS YLLPSL+HRLESLMLASQLR+EI F         
Sbjct: 1003 KAQTHVHMPPELLVSIEVPITVLKSSYLLPSLIHRLESLMLASQLREEIAFT-TGSQISS 1061

Query: 1997 XXXXXXITTLRCCEDFSLERLEHLGDSVLKYAVSCYLYVKYPEKHEDQLSSRRSNQVSNA 1818
                  ITTLRC E FS+ERLE LGDSVLKYAVSC+L++KYP+KHE QLS+RRS  V N+
Sbjct: 1062 SLILEAITTLRCSESFSMERLELLGDSVLKYAVSCHLFLKYPKKHEGQLSARRSWVVCNS 1121

Query: 1817 TLHKLGINRNVQGYVRDAAFDPCRWVAPGQISLHPVPCTCGVATSEVPQKVIYEKEDKTI 1638
            TLHKLG +R++QGY+RD AFDP RWVAPGQ S+ PVPC+CGV   EVP    ++ ED  I
Sbjct: 1122 TLHKLGTDRSLQGYIRDGAFDPRRWVAPGQRSIRPVPCSCGVDALEVPLDGKFQTEDTKI 1181

Query: 1637 VIGKACDNGHRWMCSKTISDCVEALIGAYYVGGGLCAALAILKWFGIDSEFEPEMFEEAV 1458
            V+GK+CD GHRWM SKTI+DCVEALIGAYYVGGGL AAL ++KWFGID E EP + +EA+
Sbjct: 1182 VVGKSCDRGHRWMGSKTIADCVEALIGAYYVGGGLNAALHLMKWFGIDVELEPSLVDEAI 1241

Query: 1457 KAISIRSYLLKINEIQVLEAKLGYNFNVKGLLLEAITHSS---IGVDYCYQRLEFLGDSV 1287
               S+R+Y+ K NEI++LE+K+GY F+VKGLLLEAITH++   +GV YCYQRLEFLGDSV
Sbjct: 1242 ATASLRTYIPKANEIEILESKIGYEFSVKGLLLEAITHATEQELGVGYCYQRLEFLGDSV 1301

Query: 1286 LDLLITWHLFTAHENLDPGELTDLRSASVNNENFALSAVRHNLQQHLQHSSGFLLAQITE 1107
            LD+LITWHL+ +H ++DPGELTDLRSASVNNE+FA  AVR NLQQHLQH SG LL QI E
Sbjct: 1302 LDVLITWHLYQSHRDIDPGELTDLRSASVNNESFAQVAVRRNLQQHLQHCSGLLLGQIKE 1361

Query: 1106 YVKGIQEMHGSKDSLFSKSSIKGPKVLGDMFESIAGAILIDAGLNMDKVWQIFKPLLSPI 927
            Y K    + GS D      S KGPK LGD+ ESIAGAILID  LN+++VW+IFKPLLSPI
Sbjct: 1362 YAK---YLSGSDDVPNPLQSTKGPKALGDLVESIAGAILIDTKLNLNEVWRIFKPLLSPI 1418

Query: 926  VTPDNFELPPMRELSELCSELGYFLAVKCIEDGXXXXXXXXXXXXXXXLARRGREXXXXX 747
            VTPD  ELPP+REL+ELC  LGYF+  KC   G               L   G       
Sbjct: 1419 VTPDKLELPPLRELNELCDSLGYFIKEKCTNKGELVHAELRLQMIDVLLVGEGCGRNKKA 1478

Query: 746  XXXXXXXXXXKDMEEKGLSHSRHPSKRRVIEERSVGEENFVASSVQ---NVCAVSPTVAE 576
                      K++E++G+S+SR  SKRR      VG    V+SS+    + C  S     
Sbjct: 1479 AKGQAAAQLLKNLEKRGISYSRSNSKRRKQGADLVG----VSSSLNMGGDACGQSNNEDS 1534

Query: 575  SVKYDKTSDSDPRPPVNLSVKMKKGGPRSALYELCKKSLWPMPIFXXXXXXXXXXXSVGK 396
            S  YD          V  S+ MKKGGPRS+LYELCK+  WPMP F             G+
Sbjct: 1535 SENYDFVF------AVIKSINMKKGGPRSSLYELCKRLQWPMPSFESKEQRSRFPIIFGE 1588

Query: 395  G--ERNGHLSFVSSSKLHLPDGRSINCVGERRADKKSSQDSAALALLYELQKQGRCCV 228
            G   R G  SF+SS  LH+P+   + C G+ RADKKSS DSAAL +L+ELQ++G+  +
Sbjct: 1589 GSERREGFNSFISSISLHIPNCGVMECRGDHRADKKSSLDSAALVMLHELQRRGKLII 1646


>emb|CBI20740.3| unnamed protein product [Vitis vinifera]
          Length = 1688

 Score = 1781 bits (4614), Expect = 0.0
 Identities = 946/1652 (57%), Positives = 1167/1652 (70%), Gaps = 57/1652 (3%)
 Frame = -2

Query: 5012 DFEPRSYQVEVFDVAVRRNTIAVLDTGAGKTMIAVMLIRHFIDEAMATGDGRRVVFLAPT 4833
            +  PRSYQ +VF+VA RRNTIAVLDTG GKTMIA+MLIR       A G    ++FLAPT
Sbjct: 43   ELSPRSYQWKVFEVAKRRNTIAVLDTGTGKTMIALMLIREIGQAVKADGRKLFIIFLAPT 102

Query: 4832 VHLVTQ--------QYEVIKLHTGLEVECYYGAKGVDDWNVERWEKEISSNQVLVMTPQI 4677
            VHLV Q        Q++VIK  TG EVE YYGAKGVD+W+ + WEKEIS + VLVMTPQI
Sbjct: 103  VHLVNQACFFFIFSQFKVIKDSTGFEVEEYYGAKGVDEWSAKSWEKEISEHDVLVMTPQI 162

Query: 4676 LLDAFRNAFLKLDMVHLLIFDECHRATGGHPYSRILKEFYHNSTGKPHVFGMTASPVIRK 4497
            LLDA R AFL L+ V L+I DECHRATG HPY++I+KEFYH S  KP +FGMTASPVIRK
Sbjct: 163  LLDALRKAFLSLETVCLMIVDECHRATGNHPYTKIMKEFYHKSVDKPKIFGMTASPVIRK 222

Query: 4496 GVSSALDCENQISELESVLDSKVFTVRDRSEIDLFVPEAKYVNKYYNRMVFTHEGLKMKL 4317
            GVSS++DCENQISELES+LD +++T+ DR+E+++F+P AK +N++Y+   F +  LK KL
Sbjct: 223  GVSSSMDCENQISELESILDCQIYTIEDRTELEVFIPSAKEINRFYDASQFHNLDLKAKL 282

Query: 4316 GSIWNKCDALMAHLQEKTLDQYKDAHDMIKTSRKRLSSSHAKICHCLDDLGLICALEAAK 4137
             S W+K D L+ +LQ   + QYKD  D +K  RKRLS+ HAKI +CLDDLGLICA EA K
Sbjct: 283  KSSWSKFDNLLLNLQGSPMTQYKDMDDKLKALRKRLSNDHAKILYCLDDLGLICAYEAVK 342

Query: 4136 VCMEVLSLPSECCEFSVETYDVDKSFTEEALSTIAESLPNDYESLLKTEDGCLGAIQFGY 3957
            VC+E +S   E  EF  ++    K F +E L  I   LP+   + L +E   L A+  GY
Sbjct: 343  VCIENVSNAQEEFEFYRQSSSQCKCFLQEVLGIIGGYLPHGDGNYLNSESDILKAVDKGY 402

Query: 3956 ISPKLHELIKIFQSLGILNQVQCLIFVERIITSKVIERFIRKISYLSHFTVSYLTGGSSS 3777
            I+PKLHEL+++FQS G+  +V CLIFVERIIT+KVIERFI+KI YLSHFTVSYLTG +SS
Sbjct: 403  ITPKLHELLQLFQSFGVARKVLCLIFVERIITAKVIERFIKKIIYLSHFTVSYLTGSNSS 462

Query: 3776 ADALTPKMQKETLDSFRSRKVNLLFTTDVAEEGIHVPDCSCVIRFDLPKTVRSYVQSCGR 3597
             DAL PK Q+ETL+SFRS KVNLLF TDV EEGIHVP+CSCVIRFDLPKTVRSYVQS GR
Sbjct: 463  VDALAPKAQRETLESFRSGKVNLLFATDVVEEGIHVPNCSCVIRFDLPKTVRSYVQSRGR 522

Query: 3596 ARTADSQFVIMLERGNIQQRELLFDIIRSRHSMITTALNRDADAWNSKVTFNETIESYHV 3417
            AR +DSQF+IMLERGN +QR+ LFDIIRS +SM  TA NRD D +  K    E ++SY V
Sbjct: 523  ARQSDSQFIIMLERGNTEQRDQLFDIIRSEYSMTDTATNRDPDGYTLKAYTIEEMDSYFV 582

Query: 3416 ESTGASLTADSSISLIYRYCGKLPRDKYFTPKPVFQFSMYNGCFQCTLTLPPTAAFQTIL 3237
            +STGAS+TADSS+SLI+RYC KLP DKYFTPKP F F+   G ++C LTLPP AAFQTI+
Sbjct: 583  DSTGASVTADSSVSLIHRYCEKLPGDKYFTPKPFFHFTYLEGMYECKLTLPPNAAFQTII 642

Query: 3236 GPIGGNSHIAKQLVCLAACKKLHNLGALNDHLLPVIKEHTEVEVDEKEKASASGAGTKKR 3057
            GP   NSH++KQLVCL ACKKLH +GAL+DHLLP ++E +E ++  K K SA+GAGT KR
Sbjct: 643  GPGNKNSHLSKQLVCLEACKKLHQMGALDDHLLPYVEEPSENDIIVKSKGSAAGAGTTKR 702

Query: 3056 KELHSTATISSLSGTWANKRDGIILQGYNLTFSCDLVGQYYCSFILLVDAILDEDVACTE 2877
            KELH T    +LSGTW +K DG I Q Y + FSC++V + Y  F+LL+++ LD+DV   E
Sbjct: 703  KELHGTTQTCALSGTWGDKIDGAIFQAYKIDFSCNIVNELYSGFVLLIESKLDDDVGNIE 762

Query: 2876 MDLYLLNKMAKAYVRPCGPVTLDMEQVEQAKLFQEFFFNGLFGKLFTGSKSGG-QRKFLL 2700
            M+LYL++K  +  V  CG V+LD EQV +A  F E FFN LFG+LF GSKS G +R+FLL
Sbjct: 763  MELYLISKFVRTSVSSCGQVSLDAEQVMKAMRFHELFFNSLFGRLFIGSKSSGVRREFLL 822

Query: 2699 NNKE-SLWSTSNMYLLLPLETSVIGLNESVNIYWKAIRATVSVVEFM--RNIYSSGAEFS 2529
            N ++ SLWS+SNMYLLLP+E+S I  +ES  I W  I +  SVVEF+  R+  S+G    
Sbjct: 823  NTQQKSLWSSSNMYLLLPIESSNIPSDESWRINWPGINSCASVVEFLEKRSQLSTGNMND 882

Query: 2528 EALNSCPS-----RTECGASDMIHLADKSVDQRSLKDMVVLAIHTGKIYSVLDVISNSSA 2364
            +  N  P       TEC +   +HLA+ SV   +LK+MVVLAIHTG+IYS+LDV+ ++SA
Sbjct: 883  DTGNPSPCSTGLVETECKSISTVHLANNSVHVNNLKNMVVLAIHTGRIYSILDVVIDTSA 942

Query: 2363 DSPFDGNSD--KSVWMTFSDYFKKKYGIVLQHSGQPLLLLKQSHNPHNLL------SSKS 2208
            +SPFDG++D   S + TF++YF  KYGIVL + GQPLLLLKQSHN HNLL        ++
Sbjct: 943  ESPFDGSADVNSSNYTTFAEYFNNKYGIVLMYPGQPLLLLKQSHNAHNLLVNFNDEGGEA 1002

Query: 2207 KCKGDKRTNNGGQNHVHMPPELVAHIDVPINVLKSFYLLPSLMHRLESLMLASQLRKEIT 2028
               G K  N   Q HVHMPPEL+  I+VPI VLKS YLLPSL+HRLESLMLASQLR+EI 
Sbjct: 1003 LQTGQKMLNEKAQTHVHMPPELLVSIEVPITVLKSSYLLPSLIHRLESLMLASQLREEIA 1062

Query: 2027 FNYXXXXXXXXXXXXXITTLRCCEDFSLERLEHLGDSVLKYAVSCYLYVKYPEKHEDQLS 1848
            F               ITTLRC E FS+ERLE LGDSVLKYAVSC+L++KYP+KHE QLS
Sbjct: 1063 FT-TGSQISSSLILEAITTLRCSESFSMERLELLGDSVLKYAVSCHLFLKYPKKHEGQLS 1121

Query: 1847 SRRSNQVSNATLHKLGINRNVQGYVRDAAFDPCRWVAPGQISLHPVPCTCGVATSEVPQK 1668
            +RRS  V N+TLHKLG +R++QGY+RD AFDP RWVAPGQ S+ PVPC+CGV   EVP  
Sbjct: 1122 ARRSWVVCNSTLHKLGTDRSLQGYIRDGAFDPRRWVAPGQRSIRPVPCSCGVDALEVPLD 1181

Query: 1667 VIYEKEDKTIVIGKACDNGHRWMCSKTISDCVEALIGAYYVGGGLCAALAILKWFGIDSE 1488
              ++ ED  IV+GK+CD GHRWM SKTI+DCVEALIGAYYVGGGL AAL ++KWFGID E
Sbjct: 1182 GKFQTEDTKIVVGKSCDRGHRWMGSKTIADCVEALIGAYYVGGGLNAALHLMKWFGIDVE 1241

Query: 1487 FEPEMFEEAVKAISIRSYLLKINEIQVLEAKLGYNFNVKGLLLEAITHSS---IGVDYCY 1317
             EP + +EA+   S+R+Y+ K NEI++LE+K+GY F+VKGLLLEAITH++   +GV YCY
Sbjct: 1242 LEPSLVDEAIATASLRTYIPKANEIEILESKIGYEFSVKGLLLEAITHATEQELGVGYCY 1301

Query: 1316 QRLEFLGDSVLDLLITWHLFTAHENLDPGELTDLRSASVNNENFALSAVRHNLQQHLQHS 1137
            QRLEFLGDSVLD+LITWHL+ +H ++DPGELTDLRSASVNNE+FA  AVR NLQQHLQH 
Sbjct: 1302 QRLEFLGDSVLDVLITWHLYQSHRDIDPGELTDLRSASVNNESFAQVAVRRNLQQHLQHC 1361

Query: 1136 SGFLLAQITEYVKGIQEMHGSKDSLFSKSSIKGPKVLGDMFESIAGAILIDAGLNMDKVW 957
            SG LL QI EY K    + GS D      S KGPK LGD+ ESIAGAILID  LN+++VW
Sbjct: 1362 SGLLLGQIKEYAK---YLSGSDDVPNPLQSTKGPKALGDLVESIAGAILIDTKLNLNEVW 1418

Query: 956  QIFKPLLSPIVTPDNFELPPMRELSELCSELGYFLAVKCIEDGXXXXXXXXXXXXXXXLA 777
            +IFKPLLSPIVTPD  ELPP+REL+ELC  LGYF+  KC   G               L 
Sbjct: 1419 RIFKPLLSPIVTPDKLELPPLRELNELCDSLGYFIKEKCTNKGELVHAELRLQMIDVLLV 1478

Query: 776  RRGREXXXXXXXXXXXXXXXKDMEEKGLSHSRHPSKRRVIEERSVGEENFVASSVQ---N 606
              G                 K++E++G+S+SR  SKRR      VG    V+SS+    +
Sbjct: 1479 GEGCGRNKKAAKGQAAAQLLKNLEKRGISYSRSNSKRRKQGADLVG----VSSSLNMGGD 1534

Query: 605  VCAVS--PTVAESVKYDKTSDS--------------------DPR--PPVNLSVKMKKGG 498
             C  S     +E +K+ K   +                     P+   PV  S+ MKKGG
Sbjct: 1535 ACGQSNNEDSSELIKFHKKQKTTGMQLCTRTSIANNCLENACKPKLDTPVIKSINMKKGG 1594

Query: 497  PRSALYELCKKSLWPMPIFXXXXXXXXXXXSVGKG--ERNGHLSFVSSSKLHLPDGRSIN 324
            PRS+LYELCK+  WPMP F             G+G   R G  SF+SS  LH+P+   + 
Sbjct: 1595 PRSSLYELCKRLQWPMPSFESKEQRSRFPIIFGEGSERREGFNSFISSISLHIPNCGVME 1654

Query: 323  CVGERRADKKSSQDSAALALLYELQKQGRCCV 228
            C G+ RADKKSS DSAAL +L+ELQ++G+  +
Sbjct: 1655 CRGDHRADKKSSLDSAALVMLHELQRRGKLII 1686


>ref|XP_004158269.1| PREDICTED: LOW QUALITY PROTEIN: endoribonuclease Dicer homolog
            3a-like [Cucumis sativus]
          Length = 1639

 Score = 1636 bits (4237), Expect = 0.0
 Identities = 874/1617 (54%), Positives = 1111/1617 (68%), Gaps = 23/1617 (1%)
 Frame = -2

Query: 5009 FEPRSYQVEVFDVAVRRNTIAVLDTGAGKTMIAVMLIRHFIDEAMATGDGRRVVFLAPTV 4830
            F PR YQ+EVF+V +RRNTIAVL TG+GKTMIAVMLI+       ++ D + ++FLAPTV
Sbjct: 37   FIPRRYQMEVFEVGMRRNTIAVLGTGSGKTMIAVMLIKEIGKAMKSSSDKKLIIFLAPTV 96

Query: 4829 HLVTQQYEVIKLHTGLEVECYYGAKGVDDWNVERWEKEISSNQVLVMTPQILLDAFRNAF 4650
            HLV QQ+ VIK HT  EV  YYGA GVDDWN+  WEKE S   VLVMTPQILLDA R A+
Sbjct: 97   HLVHQQFNVIKDHTDFEVAEYYGAMGVDDWNMNCWEKETSERDVLVMTPQILLDALRKAY 156

Query: 4649 LKLDMVHLLIFDECHRATGGHPYSRILKEFYHNSTGKPHVFGMTASPVIRKGVSSALDCE 4470
             +L  + L+I DECHRATG HPY++I+KEFYH S  KP  FGMTASPVIRKGVSS++DCE
Sbjct: 157  FRLGTICLMIIDECHRATGNHPYTKIMKEFYHKSDSKPKXFGMTASPVIRKGVSSSVDCE 216

Query: 4469 NQISELESVLDSKVFTVRDRSEIDLFVPEAKYVNKYYNRMVFTHEGLKMKLGSIWNKCDA 4290
             QI++LES+LD++V+ + D+ E++++VP AK +  +Y   +     LK K+ ++W K DA
Sbjct: 217  CQIADLESILDAQVYAIEDKKEVEIYVPSAKEICIFYEPAMPQTMELKAKIEALWFKFDA 276

Query: 4289 LMAHLQEKTLDQYKDAHDMIKTSRKRLSSSHAKICHCLDDLGLICALEAAKVCMEVLSLP 4110
             +++ QE     YKD    +K  +KRLSS H KI +CLD+LG++CA EA KV  E +S+P
Sbjct: 277  SLSNSQEAMQGHYKDVDSKLKALKKRLSSDHLKITYCLDELGIMCAYEAIKVLFENVSVP 336

Query: 4109 SECCEFSVETYDVDKSFTEEALSTIAESLPNDYESLLKTEDGCLGAIQFGYISPKLHELI 3930
            +E  +   E++   K F EEAL  I ESL  + E++         A++ GYISPKL EL+
Sbjct: 337  NEESDVYRESFLQYKHFLEEALLVIGESLSLENENVPTLGFDLWKAVELGYISPKLFELL 396

Query: 3929 KIFQSLGILNQVQCLIFVERIITSKVIERFIRKISYLSHFTVSYLTGGSSSADALTPKMQ 3750
            ++F+S G+  QV CLIFVERII + VIER ++K+  LSHFTVSY+TG  +S  AL PK+Q
Sbjct: 397  QLFESFGVSRQVLCLIFVERIIAANVIERIVKKVENLSHFTVSYVTGCDASVGALAPKVQ 456

Query: 3749 KETLDSFRSRKVNLLFTTDVAEEGIHVPDCSCVIRFDLPKTVRSYVQSCGRARTADSQFV 3570
            KETL+ F   K+NLLF+TDV EEG+HVP+CS V+RFDLPKTVRSYVQS GRAR  +SQ++
Sbjct: 457  KETLELFCHGKLNLLFSTDVVEEGLHVPNCSFVVRFDLPKTVRSYVQSRGRARQNNSQYI 516

Query: 3569 IMLERGNIQQRELLFDIIRSRHSMITTALNRDADAWNSKVTFNETIESYHVESTGASLTA 3390
            ++LERGN++QR LLFD+IRS  SM   A++RD DA   K       + Y VE+TGAS+TA
Sbjct: 517  LLLERGNLKQRALLFDVIRSDRSMTDAAMSRDLDACVLKPFSLMETDCYIVEATGASVTA 576

Query: 3389 DSSISLIYRYCGKLPRDKYFTPKPVFQFSMYNGCFQCTLTLPPTAAFQTILGPIGGNSHI 3210
            DSS+ L+Y+YC KLP DKYF+PKP+FQ S   G ++C LTLPPTAA QTI+GP   NS++
Sbjct: 577  DSSVGLVYQYCKKLPGDKYFSPKPIFQLSYGEGSYECQLTLPPTAALQTIVGPSTRNSNL 636

Query: 3209 AKQLVCLAACKKLHNLGALNDHLLPVIKEHTEVEVDEKEKASASGAGTKKRKELHSTATI 3030
            +KQLVCL ACKKLH +GALNDHLLP ++E +E ++  K  AS S AG+ KRKELH    I
Sbjct: 637  SKQLVCLEACKKLHQMGALNDHLLPSVEEISESDMGLKSNASTSRAGSTKRKELHGRTAI 696

Query: 3029 SSLSGTWANKRDGIILQGYNLTFSCDLVGQYYCSFILLVDAILDEDVACTEMDLYLLNKM 2850
             +LSGTW  + +G   Q Y   FSC ++ + Y  F+LL+++ LD+DV+  E++LYLL+KM
Sbjct: 697  RALSGTWEEQVEGTTFQAYKFDFSCSVIYEVYSGFVLLIESKLDDDVSNFELELYLLSKM 756

Query: 2849 AKAYVRPCGPVTLDMEQVEQAKLFQEFFFNGLFGKLFTGSKSGGQRKFLLNNKES--LWS 2676
             KA V   G V LD EQ+ +AK FQE FFNGLFG+LF GSK+ G+++  L  K++  LW 
Sbjct: 757  VKASVSFGGEVHLDAEQITKAKCFQELFFNGLFGRLFIGSKTTGKKRDFLLQKDTNPLWI 816

Query: 2675 TSNMYLLLPLETSVIGLNESVNIYWKAIRATVSVVEFMRNIYSSGAEFSEAL----NSCP 2508
            +SNMYLLLP++      ++   I+W+AI + VSVVEF++   S  AE +       +S P
Sbjct: 817  SSNMYLLLPVDLPDDSTHDLWKIHWRAIDSCVSVVEFLKKNSSLDAERNYGAGAISDSSP 876

Query: 2507 SR---TECG--ASDMIHLADKSVDQRSLKDMVVLAIHTGKIYSVLDVISNSSADSPFDGN 2343
            SR   TE G  A+ +IH A+  +D  SLKD VVLAIHTG+IYS+++V+SN+SA+SPFDGN
Sbjct: 877  SRNNSTETGSNAASVIHFANCVLDVHSLKDRVVLAIHTGRIYSIVEVVSNTSAESPFDGN 936

Query: 2342 SDKSV--WMTFSDYFKKKYGIVLQHSGQPLLLLKQSHNPHNLLSSKSKCKGDKRTNNG-- 2175
            SDK    ++TF+DYF K+YGI L    QPLL LKQSHNPHNLL +  K +G  +  +G  
Sbjct: 937  SDKGPPDYITFADYFNKRYGISLSFPKQPLLRLKQSHNPHNLLVN-FKDEGFDKLPSGPA 995

Query: 2174 ---GQNHVHMPPELVAHIDVPINVLKSFYLLPSLMHRLESLMLASQLRKEITFNYXXXXX 2004
                Q HVHMPPELV  +DVP  VLKS YLLPSL+HR ESLMLASQLRKEI ++      
Sbjct: 996  FKRPQMHVHMPPELVLSMDVPKGVLKSSYLLPSLIHRFESLMLASQLRKEINYHSNSLGI 1055

Query: 2003 XXXXXXXXITTLRCCEDFSLERLEHLGDSVLKYAVSCYLYVKYPEKHEDQLSSRRSNQVS 1824
                    +TTL  CE+FSLERLE LGDSVLKYAVSC+L++K+PEKHE QLSSRR   + 
Sbjct: 1056 SSSLILEALTTLGSCENFSLERLELLGDSVLKYAVSCHLFLKFPEKHEGQLSSRRQQVIC 1115

Query: 1823 NATLHKLGINRNVQGYVRDAAFDPCRWVAPGQISLHPVPCTCGVATSEVPQKVIYEKEDK 1644
            NATLH LG    +QGY+RD+AFDP RWVAPGQ +  PVPC CGV T EVP    +  ED 
Sbjct: 1116 NATLHALGTKCGLQGYIRDSAFDPRRWVAPGQCTNRPVPCKCGVDTVEVPLHDKFCTEDP 1175

Query: 1643 TIVIGKACDNGHRWMCSKTISDCVEALIGAYYVGGGLCAALAILKWFGIDSEFEPEMFEE 1464
             +V+GK CD GHRW+ SKTI+DC EALIGAYYV GG+ AAL ++KW GID   +  +  +
Sbjct: 1176 KVVLGKCCDKGHRWVVSKTIADCAEALIGAYYVDGGIIAALHVMKWLGIDVNLDVALVVD 1235

Query: 1463 AVKAISIRSYLLKINEIQVLEAKLGYNFNVKGLLLEAITHSS---IGVDYCYQRLEFLGD 1293
            A+ + S+RS  L   EI  LE+K+GY+F VKGLLLEA+TH+S   IGV+YCYQRLEFLGD
Sbjct: 1236 AITSASLRSCPLGDTEIATLESKIGYDFAVKGLLLEAVTHTSDQEIGVNYCYQRLEFLGD 1295

Query: 1292 SVLDLLITWHLFTAHENLDPGELTDLRSASVNNENFALSAVRHNLQQHLQHSSGFLLAQI 1113
            SVLDLLITWH +  + ++DPGELTDLRSASVNNENFA  AVR NLQQHLQH SG L++QI
Sbjct: 1296 SVLDLLITWHYYQNYSDIDPGELTDLRSASVNNENFAQVAVRRNLQQHLQHCSGLLMSQI 1355

Query: 1112 TEYVKGIQEMHGSKDSLFSKSSIKGPKVLGDMFESIAGAILIDAGLNMDKVWQIFKPLLS 933
            TEYVK + E   S+D+       KGPKVLGDM ESIAGAILID  LN+D+VW+I+KPLL+
Sbjct: 1356 TEYVKYLSE---SQDTGKPLHGNKGPKVLGDMVESIAGAILIDTKLNLDEVWKIYKPLLT 1412

Query: 932  PIVTPDNFELPPMRELSELCSELGYFLAVKCIEDGXXXXXXXXXXXXXXXLARRGREXXX 753
            P VTPD  ELPP+REL ELC  LGYF+  KC   G               L   G E   
Sbjct: 1413 PFVTPDKLELPPLRELIELCDSLGYFIKDKCTRKGETFHAELRLQLQDSLLIGEGYERTR 1472

Query: 752  XXXXXXXXXXXXKDMEEKGLSHSRHPSKRRVIEERSVGEENFVASSVQNVCAVSPTVAES 573
                          +E +G+S+SR  SK+R  +  S  E   V  S  N C+        
Sbjct: 1473 KAARGEAAHRLLAQLETRGISYSRSGSKKRK-QNPSHDESAMVLPSSVN-CSTD------ 1524

Query: 572  VKYDKTSDSDPRPPVNLSVKMKKGGPRSALYELCKKSLWPMPIFXXXXXXXXXXXSVGKG 393
                   D +   PV   + +KKGGPRS L+ELCKK  WPMP F            +G+G
Sbjct: 1525 -----ACDPNVETPVIGPINLKKGGPRSTLFELCKKLQWPMPTFNTVENKSRVQIEIGEG 1579

Query: 392  --ERNGHLSFVSSSKLHLPDGRSINCVGERRADKKSSQDSAALALLYELQKQGRCCV 228
              +R G  SF+S+  L +P+   + C GE RADKKSS DSA+L +L ELQ+QGR  +
Sbjct: 1580 LEKRKGFNSFLSNITLQIPNAGYVECEGEARADKKSSFDSASLVMLQELQQQGRVII 1636


>ref|NP_001045148.1| Os01g0909200 [Oryza sativa Japonica Group]
            gi|75321191|sp|Q5N870.1|DCL3A_ORYSJ RecName:
            Full=Endoribonuclease Dicer homolog 3a; AltName:
            Full=Dicer-like protein 3a; Short=OsDCL3a
            gi|56785369|dbj|BAD82327.1| putative Endoribonuclease
            Dicer homolog [Oryza sativa Japonica Group]
            gi|113534679|dbj|BAF07062.1| Os01g0909200 [Oryza sativa
            Japonica Group]
          Length = 1651

 Score = 1627 bits (4212), Expect = 0.0
 Identities = 880/1637 (53%), Positives = 1107/1637 (67%), Gaps = 39/1637 (2%)
 Frame = -2

Query: 5012 DFEPRSYQVEVFDVAVRRNTIAVLDTGAGKTMIAVMLIRHFIDEAMATGDGRRVVFLAPT 4833
            DF PR YQ++V++VA+RRNTIA+LDTGAGKTMIAVMLI+ F         G+ ++FLAPT
Sbjct: 29   DFTPRRYQLDVYEVAMRRNTIAMLDTGAGKTMIAVMLIKEFGKINRTKNAGKVIIFLAPT 88

Query: 4832 VHLVTQQYEVIKLHTGLEVECYYGAKGVDDWNVERWEKEISSNQVLVMTPQILLDAFRNA 4653
            V LVTQQ EVI++HT  EVE YYGAKGVD W   RW+++IS  QV+VMTPQ+ L A RNA
Sbjct: 89   VQLVTQQCEVIEIHTDFEVEQYYGAKGVDQWTGPRWQEQISKYQVMVMTPQVFLQALRNA 148

Query: 4652 FLKLDMVHLLIFDECHRATGGHPYSRILKEFYHNSTGKPHVFGMTASPVIRKGVSSALDC 4473
            FL LDMV L+IFDECH ATG HPY+RI+KEFYH S  KP VFGMTASPVIRKG+SS LDC
Sbjct: 149  FLILDMVSLMIFDECHHATGNHPYTRIMKEFYHKSEHKPSVFGMTASPVIRKGISSHLDC 208

Query: 4472 ENQISELESVLDSKVFTVRDRSEIDLFVPEAKYVNKYYNRMVFTHEGLKMKLGSIWNKCD 4293
            E Q  ELE++LD+K++TV DR EI+  VP AK + +YY+      E L  +LG + +K D
Sbjct: 209  EGQFCELENLLDAKIYTVSDREEIEFCVPSAKEMCRYYDSKPVCFEDLSEELGVLCSKYD 268

Query: 4292 ALMAHLQEKTLDQYKDAHDMIKTSRKRLSSSHAKICHCLDDLGLICALEAAKVCME---- 4125
            AL+  LQ K  D YKDA D+ K S++RLS S AKIC+CLDD+GLICA EA K+C+E    
Sbjct: 269  ALITELQNKRSDMYKDADDITKESKRRLSKSIAKICYCLDDVGLICASEATKICIERGQE 328

Query: 4124 ------VLSLPSECCEFS-----VETYDVDKSFTEEALSTIAESLPNDYESLLKTEDGCL 3978
                  V+    +  + +      E   +   F EEAL  I + L    + LL +E GC+
Sbjct: 329  KGWLKEVVDATDQQTDANGSRLFAENSALHMKFFEEALHLIDKRLQQGIDMLLNSESGCV 388

Query: 3977 GAIQFGYISPKLHELIKIFQSLGILNQVQCLIFVERIITSKVIERFIRKISYLSHFTVSY 3798
             A + GYISPKL+ELI+IF S       +CLIFV+R IT++VI+R I+KI +L+HFTVS+
Sbjct: 389  EAAKTGYISPKLYELIQIFHSFSNSRHARCLIFVDRKITARVIDRMIKKIGHLAHFTVSF 448

Query: 3797 LTGGSSSADALTPKMQKETLDSFRSRKVNLLFTTDVAEEGIHVPDCSCVIRFDLPKTVRS 3618
            LTGG SS DALTPKMQK+TLDSFRS KVNLLFTTDVAEEGIHVP+CSCVIRFDLP+T RS
Sbjct: 449  LTGGRSSVDALTPKMQKDTLDSFRSGKVNLLFTTDVAEEGIHVPECSCVIRFDLPRTTRS 508

Query: 3617 YVQSCGRARTADSQFVIMLERGNIQQRELLFDIIRSRHSMITTALNRDADAWNSKVTFNE 3438
            YVQS GRAR  DSQ+++M+ERGN++Q +L+  I+RS  SM+  A +R++   +     NE
Sbjct: 509  YVQSRGRARQEDSQYILMIERGNVKQNDLISAIVRSETSMVKIASSRESGNLSPGFVPNE 568

Query: 3437 TIESYHVESTGASLTADSSISLIYRYCGKLPRDKYFTPKPVFQFSMYNGCFQCTLTLPPT 3258
             I  YHV +TGA +TADSSIS++YRYC KLP+DK ++PKP F+F+ ++  + CTL LPP+
Sbjct: 569  EINEYHVGTTGAKVTADSSISIVYRYCEKLPQDKCYSPKPTFEFTHHDDGYVCTLALPPS 628

Query: 3257 AAFQTILGPIGGNSHIAKQLVCLAACKKLHNLGALNDHLLPVIKEHTEVEVDEKEKASAS 3078
            A  Q ++GP   N H AKQLVCL ACKKLH LGAL+DHL   +++    E+  K K   +
Sbjct: 629  AVLQILVGPKARNMHKAKQLVCLDACKKLHELGALDDHLCLSVEDPVP-EIVSKNK--GT 685

Query: 3077 GAGTKKRKELHSTATISSLSGTWANKRDGIILQGYNLTFSCDLVGQYYCSFILLVDAILD 2898
            G GT KRKELH T  I + SG W +K+  + LQ Y + F CD  GQ Y  F+LL+DA L 
Sbjct: 686  GIGTTKRKELHGTTRIHAWSGNWVSKKTALKLQSYKMNFVCDQAGQIYSEFVLLIDATLP 745

Query: 2897 EDVACTEMDLYLLNKMAKAYVRPCGPVTLDMEQVEQAKLFQEFFFNGLFGKLFTGSK-SG 2721
            ++VA  E+DLYL +KM K  V  CG + LD +Q+EQAKLFQ   FNGLFGKLFT SK   
Sbjct: 746  DEVATLEIDLYLHDKMVKTSVSSCGLLELDAQQMEQAKLFQGLLFNGLFGKLFTRSKVPN 805

Query: 2720 GQRKFLLNNKES-LWSTSNMYLLLPLETSVIGLNESVNIYWKAIRATVSVVEFMRNIYSS 2544
              R+F+LN +++ +W+T+++YLLLP   S    + +V I W  I A  + V+ MR IYS 
Sbjct: 806  APREFILNKEDTFVWNTASVYLLLPTNPS---FDSNVCINWSVIDAAATAVKLMRRIYSE 862

Query: 2543 GAEFSEALNSCPSRTECGASDMIHLADKSVDQRSLKDMVVLAIHTGKIYSVLDVISNSSA 2364
                 E L    S    G  D+IHLA+KS    SLKDMVVLA+HTGKIY+ LD I+  S 
Sbjct: 863  NKR--ELLGIFDSDQNVG--DLIHLANKSCKANSLKDMVVLAVHTGKIYTALD-ITELSG 917

Query: 2363 DSPFDGNSDKS--VWMTFSDYFKKKYGIVLQHSGQPLLLLKQSHNPHNLLSSKSKCKGDK 2190
            DS FDG SDK    + TF++YFKKKYGIVL+H  QPLL+LK SHNPHNLLSSK + +G+ 
Sbjct: 918  DSAFDGASDKKECKFRTFAEYFKKKYGIVLRHPSQPLLVLKPSHNPHNLLSSKFRDEGNV 977

Query: 2189 RTN--------NGGQNHVHMPPELVAHIDVPINVLKSFYLLPSLMHRLESLMLASQLRKE 2034
              N        N   N VHMPPEL+  +D+P+ +L+SFYL P+LM+R+ESL LASQLR E
Sbjct: 978  VENMSNGTPVVNKTSNRVHMPPELLIPLDLPVEILRSFYLFPALMYRIESLTLASQLRSE 1037

Query: 2033 ITFNYXXXXXXXXXXXXXITTLRCCEDFSLERLEHLGDSVLKYAVSCYLYVKYPEKHEDQ 1854
            I   Y             ITTLRC EDFS+ERLE LGDSVLKYAVSC+L++K+P K E Q
Sbjct: 1038 I--GYSDSNISSFLILEAITTLRCSEDFSMERLELLGDSVLKYAVSCHLFLKFPNKDEGQ 1095

Query: 1853 LSSRRSNQVSNATLHKLGINRNVQGYVRDAAFDPCRWVAPGQISLHPVPCTCGVATSEVP 1674
            LSS R + + NATL+KLGI RNVQGYVRDAAFDP RW+APGQ+S+ P PC C V  SEV 
Sbjct: 1096 LSSIRCHMICNATLYKLGIERNVQGYVRDAAFDPRRWLAPGQLSIRPSPCECPV-KSEVV 1154

Query: 1673 QKVIYEKEDKTIVIGKACDNGHRWMCSKTISDCVEALIGAYYVGGGLCAALAILKWFGID 1494
               I+  +DK IV+GKACD GHRWMCSKTI+DCVEA+IGAYY GGGL AA+A+LKW GI 
Sbjct: 1155 TDDIHIIDDKAIVLGKACDKGHRWMCSKTIADCVEAIIGAYYAGGGLRAAMAVLKWLGIG 1214

Query: 1493 SEFEPEMFEEAVKAISIRSYLLKINEIQVLEAKLGYNFNVKGLLLEAITHSS---IGVDY 1323
            +E E ++  +A+ + S+++YL K N  ++LEAKLGY+F+VKGLL+EA+TH S   +G  Y
Sbjct: 1215 AEIEEDLIVQAILSASVQTYLPKDNVFEMLEAKLGYSFSVKGLLVEALTHPSQQELGAKY 1274

Query: 1322 CYQRLEFLGDSVLDLLITWHLFTAHENLDPGELTDLRSASVNNENFALSAVRHNLQQHLQ 1143
            CY+RLEFLGD+VLD+L+T +LF +H++ + GELTDLRSASVNNENFA  AV+HN    LQ
Sbjct: 1275 CYERLEFLGDAVLDILLTRYLFNSHKDTNEGELTDLRSASVNNENFAQVAVKHNFHHFLQ 1334

Query: 1142 HSSGFLLAQITEYVKGIQEMHGSKDSLFSKSSIKGPKVLGDMFESIAGAILIDAGLNMDK 963
            HSSG LL QITEYV  ++     K  L S    KGPKVLGD+ ESIAGAIL+D  L++D 
Sbjct: 1335 HSSGLLLDQITEYVNRLEGSSMDKVELLSDGLPKGPKVLGDIVESIAGAILLDTKLDLDV 1394

Query: 962  VWQIFKPLLSPIVTPDNFELPPMRELSELCSELGYFLAVKCIEDGXXXXXXXXXXXXXXX 783
            VW IF+PLLSPIVTP+N ELPP REL E C + GYF+ + C + G               
Sbjct: 1395 VWGIFEPLLSPIVTPENLELPPYRELIEWCGKHGYFVGINCRDQGDTVVATLDVQLKEVL 1454

Query: 782  LARRGREXXXXXXXXXXXXXXXKDMEEKGLSHSRHPSKRRVIEERSVGEENFVASSVQNV 603
            L R+G                 KD+EEKGL   ++ SK    E+       F    V  +
Sbjct: 1455 LVRQGFSKKRKDAKAHASSLLLKDLEEKGLIIPKNASKTEQFEKHCGSTNPFNNLHVDAM 1514

Query: 602  CAVSP-TVAESVKYDKTSDSDP--RPPVNLSVKMKKGGPRSALYELCKKSLWPMPIFXXX 432
               +P    E    D  + SDP    P+++ VK  KGGPR ALYELCKK  WPMP     
Sbjct: 1515 DTQTPKPTKEKNAADSRNISDPLLGKPLHVIVKTSKGGPRIALYELCKKLQWPMPTMESE 1574

Query: 431  XXXXXXXXSVGKGERNGH------LSFVSSSKLHLPDGRSINCVGERRADKKSSQDSAAL 270
                           +         +F S+  LH+P+   I+  G+ RADKKSSQDSAAL
Sbjct: 1575 KVQPSFSSVCSSPGGSSQKATPQAFAFASTITLHIPNADVISLTGDGRADKKSSQDSAAL 1634

Query: 269  ALLYELQKQGRCCVVEV 219
             LLYELQ++G   + EV
Sbjct: 1635 FLLYELQRRGTLQLQEV 1651


>gb|AEC12444.1| ribonuclease III family protein DCL3 [Gossypium hirsutum]
          Length = 1655

 Score = 1605 bits (4157), Expect = 0.0
 Identities = 858/1619 (52%), Positives = 1096/1619 (67%), Gaps = 28/1619 (1%)
 Frame = -2

Query: 4994 YQVEVFDVAVRRNTIAVLDTGAGKTMIAVMLIRHFIDEAMATGDGRRVVFLAPTVHLVTQ 4815
            YQ++V++VA RRN IA+LDTG GKTMIAVMLI+ F     +T   + ++FLAPTVHLV Q
Sbjct: 48   YQLQVYEVAKRRNIIALLDTGVGKTMIAVMLIKDFGQAIESTESKKLIIFLAPTVHLVNQ 107

Query: 4814 QYEVIKLHTGLEVECYYGAKGVDDWNVERWEKEISSNQVLVMTPQILLDAFRNAFLKLDM 4635
               +I+    LEVE YYGAKGVD+W ++ WEKE   + VLVMTPQILLDA R AFL LDM
Sbjct: 108  VCFLIRESLNLEVEQYYGAKGVDEWTLDCWEKETKEHDVLVMTPQILLDALRKAFLSLDM 167

Query: 4634 VHLLIFDECHRATGGHPYSRILKEFYHNSTGKPHVFGMTASPVIRKGVSSALDCENQISE 4455
            V L+I DECHRATG HPY++I+KEFYH S  KP +FGMTASPV+ KGV S+ +C+ Q+SE
Sbjct: 168  VSLMIIDECHRATGNHPYAKIMKEFYHKSNNKPKIFGMTASPVVSKGVLSSNNCDGQMSE 227

Query: 4454 LESVLDSKVFTVRDRSEIDLFVPEAKYVNKYYNRMVFTHEGLKMKLGSIWNKCDALMAHL 4275
            LE VLDS ++T+ DR+E++  VP AK   ++++   F+   LK K+ + W K D  +++L
Sbjct: 228  LECVLDSLIYTIEDRTEMEACVPSAKESCRFFDPAQFSSLDLKAKVEASWLKTDGSLSNL 287

Query: 4274 QEKTLDQYKDAHDMIKTSRKRLSSSHAKICHCLDDLGLICALEAAKVCMEVLSLPSECCE 4095
            Q      +KD  D +K  RKRLS+ HAK+ HCLD+LGLICA EA  +C+E +   +E  +
Sbjct: 288  QSSLQTSHKDMDDKLKNLRKRLSNDHAKVLHCLDNLGLICAYEAVNICLENILDTTEESK 347

Query: 4094 FSVETYDVDKSFTEEALSTIAESLPNDYESLLKTEDGCLGAIQFGYISPKLHELIKIFQS 3915
               E+    K+F EE    I ESLP   ++ L +    L A+  GYISPKLHEL+++FQS
Sbjct: 348  AYRESVLQYKNFLEEVQCRIGESLPLGDKNFLNSGFDYLKAVDLGYISPKLHELLQLFQS 407

Query: 3914 LGILNQVQCLIFVERIITSKVIERFIRKISYLSHFTVSYLTGGSSSADALTPKMQKETLD 3735
             G   QV CLIFVERIIT+KVIERF +K+S LSHF VSY+TG ++S D+L PK+QKETL+
Sbjct: 408  FGETRQVLCLIFVERIITAKVIERFAKKVSCLSHFMVSYMTGSNTSVDSLAPKIQKETLE 467

Query: 3734 SFRSRKVNLLFTTDVAEEGIHVPDCSCVIRFDLPKTVRSYVQSCGRARTADSQFVIMLER 3555
            SFRS KVNLLFTTDV EEGIHVP+C  VIRFDLPKTVRSYVQS GRAR  +S+F++MLER
Sbjct: 468  SFRSGKVNLLFTTDVVEEGIHVPNCCYVIRFDLPKTVRSYVQSRGRARQNNSEFIMMLER 527

Query: 3554 GNIQQRELLFDIIRSRHSMITTALNRDADAWNSKV---TFNETIESYHVESTGASLTADS 3384
            GN++QR  L+DIIRS +SM  +A+ RD D+    +   TF ET   + V++TGAS+TADS
Sbjct: 528  GNVKQRNQLYDIIRSEYSMTNSAIKRDPDSDPCLLKDHTFEET-NVFIVDATGASVTADS 586

Query: 3383 SISLIYRYCGKLPRDKYFTPKPVFQFSMYNGCFQCTLTLPPTAAFQTILGPIGGNSHIAK 3204
            ++SLI++YCGKLP DKY+TPKP FQF+   G ++C LTLP  AA QTI+GP   NSH+AK
Sbjct: 587  AVSLIHKYCGKLPGDKYYTPKPNFQFTSSEGLYKCKLTLPVNAAVQTIVGPPSRNSHLAK 646

Query: 3203 QLVCLAACKKLHNLGALNDHLLPVIKEHTEVEVDEKEKAS----ASGAGTKKRKELHSTA 3036
            QLVCL ACK+LH +GAL+DHL P I+E +E     K K S     +GAGT KRKELH T 
Sbjct: 647  QLVCLEACKQLHQMGALDDHLTPSIEEPSENACISKGKDSGAGAGAGAGTTKRKELHGTT 706

Query: 3035 TISSLSGTWANKRDGIILQGYNLTFSCDLVGQYYCSFILLVDAILDEDVACTEMDLYLLN 2856
             I +L G+W  K D  +   Y   F C+++   Y  F+LL+++ L +DV  TEMDL+L+ 
Sbjct: 707  CIQALCGSWGEKSDDAVFFAYKFDFKCNIITVVYSGFVLLIESKLADDVGNTEMDLFLIG 766

Query: 2855 KMAKAYVRPCGPVTLDMEQVEQAKLFQEFFFNGLFGKLFTGSK-SGGQRKFLLNNK-ESL 2682
            KM KA V  CG V L+ EQ+ +AK FQEFFFNGLFGKLF GSK SG  R+FLL +K  SL
Sbjct: 767  KMVKASVSSCGQVRLNAEQMMKAKRFQEFFFNGLFGKLFVGSKSSGAPREFLLRDKTSSL 826

Query: 2681 WSTSNMYLLLPLETSVIGLNESVNIYWKAIRATVSVVEFMRNIYSSGAEFSEALNSCPSR 2502
            WS S MYLLLPLE +     + + I+W  I A     EF+      G E S+   S PS 
Sbjct: 827  WSPSRMYLLLPLEDN---STDELRIHWPGITACTLAAEFLNKNSLLGTEQSDDGGSNPSL 883

Query: 2501 -------TECGASDMIHLADKSVDQRSLKDMVVLAIHTGKIYSVLDVISNSSADSPFDGN 2343
                   T+C  +++I  A+ SVD  SL++ VVLAIHTG+IY +++ +S+ +A+S F   
Sbjct: 884  NSTGSPVTDCKETNIIRFANSSVDANSLRNTVVLAIHTGRIYCIIEAVSDKTAESSFAET 943

Query: 2342 SD--KSVWMTFSDYFKKKYGIVLQHSGQPLLLLKQSHNPHNLLSS------KSKCKGDKR 2187
             D   S +  F +YF KKY IVL+H GQPL+LLKQSHNPHNLL +       +K      
Sbjct: 944  VDTVSSEFANFYEYFYKKYNIVLKHPGQPLMLLKQSHNPHNLLVNFNDEGVSAKASQAGV 1003

Query: 2186 TNNGGQNHVHMPPELVAHIDVPINVLKSFYLLPSLMHRLESLMLASQLRKEITFNYXXXX 2007
             N   + HVHMPPEL+  +DVP++VLKS YLLPSLMHRLESLMLA+QLR+EI F      
Sbjct: 1004 VNEKPRFHVHMPPELLLVLDVPVSVLKSLYLLPSLMHRLESLMLANQLREEINFCSSNID 1063

Query: 2006 XXXXXXXXXITTLRCCEDFSLERLEHLGDSVLKYAVSCYLYVKYPEKHEDQLSSRRSNQV 1827
                     +TTLRCCE FS+ERLE LGDSVLKYAVSC+L+++YP KHE QLS+RRS  V
Sbjct: 1064 IPSSMILEALTTLRCCESFSMERLELLGDSVLKYAVSCHLFLRYPNKHEGQLSARRSLAV 1123

Query: 1826 SNATLHKLGINRNVQGYVRDAAFDPCRWVAPGQISLHPVPCTCGVATSEVPQKVIYEKED 1647
             N+TLHKLG +  +QGY+RD+AFDP RWVAPGQ  L PVPC CGV + EVP    ++ ED
Sbjct: 1124 CNSTLHKLGTDHKIQGYIRDSAFDPRRWVAPGQRVLRPVPCKCGVDSLEVPLDKKFQTED 1183

Query: 1646 KTIVIGKACDNGHRWMCSKTISDCVEALIGAYYVGGGLCAALAILKWFGIDSEFEPEMFE 1467
              + +GK+CD GHRW+CSKTISDCVEALIGAYY+ GGL AAL ++KW GID+E +P +  
Sbjct: 1184 PKVKVGKSCDRGHRWLCSKTISDCVEALIGAYYLSGGLVAALHVMKWLGIDAELDPLVVA 1243

Query: 1466 EAVKAISIRSYLLKINEIQVLEAKLGYNFNVKGLLLEAITHSSIGVDYCYQRLEFLGDSV 1287
            E +   S+R+Y+    EI ++E+K+GYNF+VK  L EA+TH S+   YCYQRLEFLGDSV
Sbjct: 1244 EVINQASLRTYVPNY-EIHMIESKVGYNFSVKFFLQEALTHESLHESYCYQRLEFLGDSV 1302

Query: 1286 LDLLITWHLFTAHENLDPGELTDLRSASVNNENFALSAVRHNLQQHLQHSSGFLLAQITE 1107
            LDLLIT +L+  H N+DPGELTDLRSASVNNENFA  AVRH+L +HLQH S  L  QI+E
Sbjct: 1303 LDLLITQYLYNHHTNIDPGELTDLRSASVNNENFAQVAVRHDLHKHLQHCSTLLSNQISE 1362

Query: 1106 YVKGIQEMHGSKDSLFSKSSIKGPKVLGDMFESIAGAILIDAGLNMDKVWQIFKPLLSPI 927
            YV+   E   S ++     SIKGPK LGD+ ESI GAILID  LN+DKVW+I +PLLSPI
Sbjct: 1363 YVQSFTE---SDNTTRLDPSIKGPKALGDLVESIVGAILIDTNLNLDKVWRIVEPLLSPI 1419

Query: 926  VTPDNFELPPMRELSELCSELGYFLAVKCIEDGXXXXXXXXXXXXXXXLARRGREXXXXX 747
            VTPD  ELPP REL+ELC  LGYF+  KC   G               L   G +     
Sbjct: 1420 VTPDKLELPPFRELNELCDSLGYFIKEKCKNKGEVVHAELLLQLDHDLLVGEGFDRSRKV 1479

Query: 746  XXXXXXXXXXKDMEEKGLSHSRHPSKRRVIEERSVGEENFVASSV--QNVCAVSPTVAES 573
                      KD+E +G+  SR   K   ++     E++ +  ++  +   A    + ES
Sbjct: 1480 AKGKAASCLLKDLENRGI--SRKKRKHDCVDSSQTMEDDSLEPTIPKRQRRAEIQLLDES 1537

Query: 572  VKYDKTSDSDPRPPVNLSVKMKKGGPRSALYELCKKSLWPMPIFXXXXXXXXXXXSVGKG 393
                K   + P  PV ++VK KKGGPR+ L+ELCKK LWPMP              +G+G
Sbjct: 1538 ---KKACSATPATPVIVTVKTKKGGPRTTLFELCKKLLWPMPSIKATEHKSSAPMEIGEG 1594

Query: 392  --ERNGHLSFVSSSKLHLPDGRSINCVGERRADKKSSQDSAALALLYELQKQGRCCVVE 222
               + G +SFVS   L++P    I C G+ +ADKKSS DSAAL +LYEL+++G+  + E
Sbjct: 1595 PERKKGFISFVSKIILNVPGYDIIECTGDAKADKKSSSDSAALFMLYELEQRGKLIIEE 1653