BLASTX nr result
ID: Dioscorea21_contig00005406
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00005406
(1561 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001168324.1| uncharacterized protein LOC100382091 [Zea ma... 429 e-117
gb|AAG59664.1|AC084319_22 putative RNA binding protein [Oryza sa... 428 e-117
gb|EEC75600.1| hypothetical protein OsI_12307 [Oryza sativa Indi... 428 e-117
ref|NP_001050516.1| Os03g0569900 [Oryza sativa Japonica Group] g... 428 e-117
gb|ABF97193.1| RNA recognition motif family protein, expressed [... 428 e-117
>ref|NP_001168324.1| uncharacterized protein LOC100382091 [Zea mays]
gi|223947441|gb|ACN27804.1| unknown [Zea mays]
gi|223947469|gb|ACN27818.1| unknown [Zea mays]
gi|413933766|gb|AFW68317.1| hypothetical protein
ZEAMMB73_975236, partial [Zea mays]
Length = 406
Score = 429 bits (1103), Expect = e-117
Identities = 207/308 (67%), Positives = 264/308 (85%), Gaps = 4/308 (1%)
Frame = +2
Query: 311 GSSDEIRSLWIGDLQYWMDEAYLQSCFSQPLQNGELLSMKIIRNRQTGHSEGYGFLEFAT 490
G+ DE R+LWIGDLQYWMDE YL SCFSQ GE++S+KIIRN+QTG EGYGF+EF+
Sbjct: 64 GAGDEARTLWIGDLQYWMDENYLYSCFSQA---GEVISVKIIRNKQTGQPEGYGFIEFSN 120
Query: 491 QAIAERILQTYNGQMMPNIDQAYKMNWASPGAGERR-DNGADHTVFVGDLASDVTDYILE 667
A+AE++LQ YNGQMMPN++Q +K+NWA+ GAGE+R D+G+D+T+FVGDLASDVTD+IL+
Sbjct: 121 HAVAEQVLQNYNGQMMPNVNQPFKLNWATSGAGEKRGDDGSDYTIFVGDLASDVTDFILQ 180
Query: 668 ETFKAVYSSVKGAKVVIDRVTGRSKGYGFVRFGDLNEQTRAMTEMNGVYCSTRAMRIGPA 847
+TFK+ Y SVKGAKVV DR TGRSKGYGFV+F D +EQTRAMTEMNG YCS+RAMR+GPA
Sbjct: 181 DTFKSRYPSVKGAKVVFDRTTGRSKGYGFVKFADSDEQTRAMTEMNGQYCSSRAMRLGPA 240
Query: 848 ASKKSADAPQQYTTKASYQ-TQGTDSESDPSNTTIFVGGLDANVSEDLLRETFCKYGELV 1024
++KK+ PQ + A YQ TQGTDS+SDP+NTT+FVGGLD +V+++LL++TF YGEL+
Sbjct: 241 SNKKNTGGPQ--PSSAIYQNTQGTDSDSDPNNTTVFVGGLDPSVTDELLKQTFSPYGELL 298
Query: 1025 HVKIPVGKGCGFVQFANRANAEEALKLLHGTLLGGQNIRLSWGRSP-NKQLQPDSNQWN- 1198
+VKIPVGK CGFVQ++NRA+AEEA+++L+G+ LGGQ+IRLSWGRSP NKQ Q + +QW+
Sbjct: 299 YVKIPVGKRCGFVQYSNRASAEEAIRVLNGSQLGGQSIRLSWGRSPANKQPQQEQSQWSG 358
Query: 1199 GSHYGYAQ 1222
G +YGY Q
Sbjct: 359 GGYYGYPQ 366
>gb|AAG59664.1|AC084319_22 putative RNA binding protein [Oryza sativa Japonica Group]
gi|108709397|gb|ABF97192.1| RNA recognition motif family
protein, expressed [Oryza sativa Japonica Group]
gi|215678704|dbj|BAG95141.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 402
Score = 428 bits (1101), Expect = e-117
Identities = 208/304 (68%), Positives = 259/304 (85%), Gaps = 3/304 (0%)
Frame = +2
Query: 314 SSDEIRSLWIGDLQYWMDEAYLQSCFSQPLQNGELLSMKIIRNRQTGHSEGYGFLEFATQ 493
+ DE+R+LWIGDLQ+WM+E YL +CFSQ GEL+S KIIRN+QTG EGYGF+EF +
Sbjct: 62 AGDEVRTLWIGDLQFWMEENYLYNCFSQA---GELISAKIIRNKQTGQPEGYGFIEFGSH 118
Query: 494 AIAERILQTYNGQMMPNIDQAYKMNWASPGAGERR-DNGADHTVFVGDLASDVTDYILEE 670
AIAE++LQ YNGQMMPN +Q +K+NWA+ GAGE+R D+G+D+T+FVGDLASDVTD IL++
Sbjct: 119 AIAEQVLQGYNGQMMPNGNQVFKLNWATSGAGEKRGDDGSDYTIFVGDLASDVTDLILQD 178
Query: 671 TFKAVYSSVKGAKVVIDRVTGRSKGYGFVRFGDLNEQTRAMTEMNGVYCSTRAMRIGPAA 850
TFKA Y SVKGAKVV DR TGRSKGYGFV+FGDL+EQTRAMTEMNG YCS+R MRIGPA+
Sbjct: 179 TFKAHYQSVKGAKVVFDRSTGRSKGYGFVKFGDLDEQTRAMTEMNGQYCSSRPMRIGPAS 238
Query: 851 SKKSADAPQQYTTKASYQ-TQGTDSESDPSNTTIFVGGLDANVSEDLLRETFCKYGELVH 1027
+KK+ QQ A+YQ TQGTDS+SDP+NTT+FVGGLD +V++++L++ F YGELV+
Sbjct: 239 NKKNIGGQQQ--PSATYQNTQGTDSDSDPNNTTVFVGGLDPSVTDEVLKQAFSPYGELVY 296
Query: 1028 VKIPVGKGCGFVQFANRANAEEALKLLHGTLLGGQNIRLSWGRSP-NKQLQPDSNQWNGS 1204
VKIPVGK CGFVQ++NRA+AEEA+++L+G+ LGGQ+IRLSWGRSP NKQ Q D NQWN
Sbjct: 297 VKIPVGKRCGFVQYSNRASAEEAIRMLNGSQLGGQSIRLSWGRSPGNKQPQQDQNQWNAG 356
Query: 1205 HYGY 1216
+YGY
Sbjct: 357 YYGY 360
>gb|EEC75600.1| hypothetical protein OsI_12307 [Oryza sativa Indica Group]
Length = 406
Score = 428 bits (1101), Expect = e-117
Identities = 208/304 (68%), Positives = 259/304 (85%), Gaps = 3/304 (0%)
Frame = +2
Query: 314 SSDEIRSLWIGDLQYWMDEAYLQSCFSQPLQNGELLSMKIIRNRQTGHSEGYGFLEFATQ 493
+ DE+R+LWIGDLQ+WM+E YL +CFSQ GEL+S KIIRN+QTG EGYGF+EF +
Sbjct: 62 AGDEVRTLWIGDLQFWMEENYLYNCFSQA---GELISAKIIRNKQTGQPEGYGFIEFGSH 118
Query: 494 AIAERILQTYNGQMMPNIDQAYKMNWASPGAGERR-DNGADHTVFVGDLASDVTDYILEE 670
AIAE++LQ YNGQMMPN +Q +K+NWA+ GAGE+R D+G+D+T+FVGDLASDVTD IL++
Sbjct: 119 AIAEQVLQGYNGQMMPNGNQVFKLNWATSGAGEKRGDDGSDYTIFVGDLASDVTDLILQD 178
Query: 671 TFKAVYSSVKGAKVVIDRVTGRSKGYGFVRFGDLNEQTRAMTEMNGVYCSTRAMRIGPAA 850
TFKA Y SVKGAKVV DR TGRSKGYGFV+FGDL+EQTRAMTEMNG YCS+R MRIGPA+
Sbjct: 179 TFKAHYQSVKGAKVVFDRSTGRSKGYGFVKFGDLDEQTRAMTEMNGQYCSSRPMRIGPAS 238
Query: 851 SKKSADAPQQYTTKASYQ-TQGTDSESDPSNTTIFVGGLDANVSEDLLRETFCKYGELVH 1027
+KK+ QQ A+YQ TQGTDS+SDP+NTT+FVGGLD +V++++L++ F YGELV+
Sbjct: 239 NKKNIGGQQQ--PSATYQNTQGTDSDSDPNNTTVFVGGLDPSVTDEVLKQAFSPYGELVY 296
Query: 1028 VKIPVGKGCGFVQFANRANAEEALKLLHGTLLGGQNIRLSWGRSP-NKQLQPDSNQWNGS 1204
VKIPVGK CGFVQ++NRA+AEEA+++L+G+ LGGQ+IRLSWGRSP NKQ Q D NQWN
Sbjct: 297 VKIPVGKRCGFVQYSNRASAEEAIRMLNGSQLGGQSIRLSWGRSPGNKQPQQDQNQWNAG 356
Query: 1205 HYGY 1216
+YGY
Sbjct: 357 YYGY 360
>ref|NP_001050516.1| Os03g0569900 [Oryza sativa Japonica Group]
gi|113548987|dbj|BAF12430.1| Os03g0569900, partial [Oryza
sativa Japonica Group]
Length = 446
Score = 428 bits (1101), Expect = e-117
Identities = 208/304 (68%), Positives = 259/304 (85%), Gaps = 3/304 (0%)
Frame = +2
Query: 314 SSDEIRSLWIGDLQYWMDEAYLQSCFSQPLQNGELLSMKIIRNRQTGHSEGYGFLEFATQ 493
+ DE+R+LWIGDLQ+WM+E YL +CFSQ GEL+S KIIRN+QTG EGYGF+EF +
Sbjct: 106 AGDEVRTLWIGDLQFWMEENYLYNCFSQA---GELISAKIIRNKQTGQPEGYGFIEFGSH 162
Query: 494 AIAERILQTYNGQMMPNIDQAYKMNWASPGAGERR-DNGADHTVFVGDLASDVTDYILEE 670
AIAE++LQ YNGQMMPN +Q +K+NWA+ GAGE+R D+G+D+T+FVGDLASDVTD IL++
Sbjct: 163 AIAEQVLQGYNGQMMPNGNQVFKLNWATSGAGEKRGDDGSDYTIFVGDLASDVTDLILQD 222
Query: 671 TFKAVYSSVKGAKVVIDRVTGRSKGYGFVRFGDLNEQTRAMTEMNGVYCSTRAMRIGPAA 850
TFKA Y SVKGAKVV DR TGRSKGYGFV+FGDL+EQTRAMTEMNG YCS+R MRIGPA+
Sbjct: 223 TFKAHYQSVKGAKVVFDRSTGRSKGYGFVKFGDLDEQTRAMTEMNGQYCSSRPMRIGPAS 282
Query: 851 SKKSADAPQQYTTKASYQ-TQGTDSESDPSNTTIFVGGLDANVSEDLLRETFCKYGELVH 1027
+KK+ QQ A+YQ TQGTDS+SDP+NTT+FVGGLD +V++++L++ F YGELV+
Sbjct: 283 NKKNIGGQQQ--PSATYQNTQGTDSDSDPNNTTVFVGGLDPSVTDEVLKQAFSPYGELVY 340
Query: 1028 VKIPVGKGCGFVQFANRANAEEALKLLHGTLLGGQNIRLSWGRSP-NKQLQPDSNQWNGS 1204
VKIPVGK CGFVQ++NRA+AEEA+++L+G+ LGGQ+IRLSWGRSP NKQ Q D NQWN
Sbjct: 341 VKIPVGKRCGFVQYSNRASAEEAIRMLNGSQLGGQSIRLSWGRSPGNKQPQQDQNQWNAG 400
Query: 1205 HYGY 1216
+YGY
Sbjct: 401 YYGY 404
>gb|ABF97193.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
Length = 406
Score = 428 bits (1101), Expect = e-117
Identities = 208/304 (68%), Positives = 259/304 (85%), Gaps = 3/304 (0%)
Frame = +2
Query: 314 SSDEIRSLWIGDLQYWMDEAYLQSCFSQPLQNGELLSMKIIRNRQTGHSEGYGFLEFATQ 493
+ DE+R+LWIGDLQ+WM+E YL +CFSQ GEL+S KIIRN+QTG EGYGF+EF +
Sbjct: 62 AGDEVRTLWIGDLQFWMEENYLYNCFSQA---GELISAKIIRNKQTGQPEGYGFIEFGSH 118
Query: 494 AIAERILQTYNGQMMPNIDQAYKMNWASPGAGERR-DNGADHTVFVGDLASDVTDYILEE 670
AIAE++LQ YNGQMMPN +Q +K+NWA+ GAGE+R D+G+D+T+FVGDLASDVTD IL++
Sbjct: 119 AIAEQVLQGYNGQMMPNGNQVFKLNWATSGAGEKRGDDGSDYTIFVGDLASDVTDLILQD 178
Query: 671 TFKAVYSSVKGAKVVIDRVTGRSKGYGFVRFGDLNEQTRAMTEMNGVYCSTRAMRIGPAA 850
TFKA Y SVKGAKVV DR TGRSKGYGFV+FGDL+EQTRAMTEMNG YCS+R MRIGPA+
Sbjct: 179 TFKAHYQSVKGAKVVFDRSTGRSKGYGFVKFGDLDEQTRAMTEMNGQYCSSRPMRIGPAS 238
Query: 851 SKKSADAPQQYTTKASYQ-TQGTDSESDPSNTTIFVGGLDANVSEDLLRETFCKYGELVH 1027
+KK+ QQ A+YQ TQGTDS+SDP+NTT+FVGGLD +V++++L++ F YGELV+
Sbjct: 239 NKKNIGGQQQ--PSATYQNTQGTDSDSDPNNTTVFVGGLDPSVTDEVLKQAFSPYGELVY 296
Query: 1028 VKIPVGKGCGFVQFANRANAEEALKLLHGTLLGGQNIRLSWGRSP-NKQLQPDSNQWNGS 1204
VKIPVGK CGFVQ++NRA+AEEA+++L+G+ LGGQ+IRLSWGRSP NKQ Q D NQWN
Sbjct: 297 VKIPVGKRCGFVQYSNRASAEEAIRMLNGSQLGGQSIRLSWGRSPGNKQPQQDQNQWNAG 356
Query: 1205 HYGY 1216
+YGY
Sbjct: 357 YYGY 360