BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00005395
         (1161 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN83935.1| hypothetical protein VITISV_035769 [Vitis vinifera]   364   3e-98
ref|XP_004141982.1| PREDICTED: pentatricopeptide repeat-containi...   350   3e-94
ref|XP_003608531.1| Pentatricopeptide repeat-containing protein ...   345   1e-92
ref|XP_003550974.1| PREDICTED: pentatricopeptide repeat-containi...   343   4e-92
ref|XP_003562366.1| PREDICTED: pentatricopeptide repeat-containi...   331   2e-88

>emb|CAN83935.1| hypothetical protein VITISV_035769 [Vitis vinifera]
          Length = 490

 Score =  364 bits (934), Expect = 3e-98
 Identities = 201/377 (53%), Positives = 255/377 (67%), Gaps = 7/377 (1%)
 Frame = -1

Query: 1110 PKTEVIRQRLLRKGVEPTPKILHTLRKKELQKSRRKAKKQALNAQSPRLSDAQKQMLXXX 931
            P TE I++ L+RKGV PTPKI+HTLRKKE+QKS RK+K+ A   QSP   +   +     
Sbjct: 12   PNTEKIKRNLIRKGVYPTPKIIHTLRKKEIQKSIRKSKRLANQNQSPTEDEEVNE----- 66

Query: 930  XXXXXXXXEYGAFKTDMEKRREGALVMSGRPWER--LKAVDLRGIWRYGEEDLGDGRLKG 757
                     +   K +  K  +  +V  G+PWER   K + L G   YG E     RLK 
Sbjct: 67   ------EAHFRTLKREYTKLSKALMV--GKPWERPGFKEI-LNGSVEYGGE-----RLKR 112

Query: 756  EHLVELREMLEKRNGDEYEWLLDDDVEE---ASGDERVMEWKKSSPKGLVGDEEKIKWLI 586
            EHL EL E+LEKR   E  WLLDDDVE    +SG+ER   W  +  +G  GD + I++L+
Sbjct: 113  EHLRELSEILEKRG--EVRWLLDDDVEVEQGSSGNER-RGWSPARRRG--GDADAIRFLV 167

Query: 585  ERLTKMDLNMKDWKFPRLMKQSGLYFSEENLLRLLEGFEVLGNWRHALSVVEWVYNEKKY 406
            +RLT  D+ ++DWKF R+MKQSGL F+E  LLR++E     G+W+HALSVVEWVY +K  
Sbjct: 168  DRLTAADITIRDWKFSRVMKQSGLQFTERQLLRIVEELGARGHWKHALSVVEWVYTDKDK 227

Query: 405  --RFQKSRYVYTKLLAILGKGRNPREALRIFNIMRDDSYLYPDMAAFHAIAVSLGQAGLV 232
              R  KSR+VYTKLLA+LGK + P EAL IFN+MR D ++YPDMAA+H++AV+LGQAGL+
Sbjct: 228  DNRRYKSRFVYTKLLAVLGKAKRPHEALDIFNLMRGDCHIYPDMAAYHSVAVTLGQAGLL 287

Query: 231  KELISIIECMRQXXXXXXXXXXXKDWDPCLEPDIVIFNALLNACVPTHQWKGVFWIFKQI 52
            KEL++IIECMRQ           K+W+  LEPD+VIFNA+LNACVPT QWKGV W+FKQ+
Sbjct: 288  KELLNIIECMRQKPPKRIKNMCRKNWNALLEPDVVIFNAVLNACVPTQQWKGVSWVFKQL 347

Query: 51   RSMGLKPNGATYGLAME 1
            R   LKPNGATYGLAME
Sbjct: 348  RKCSLKPNGATYGLAME 364


>ref|XP_004141982.1| PREDICTED: pentatricopeptide repeat-containing protein At5g67570,
            chloroplastic-like [Cucumis sativus]
            gi|449499902|ref|XP_004160949.1| PREDICTED:
            pentatricopeptide repeat-containing protein At5g67570,
            chloroplastic-like [Cucumis sativus]
          Length = 860

 Score =  350 bits (899), Expect = 3e-94
 Identities = 189/382 (49%), Positives = 254/382 (66%), Gaps = 11/382 (2%)
 Frame = -1

Query: 1113 DPKTEVIRQRLLRKGVEPTPKILHTLRKKELQKSRRKAKKQA--LNAQSPRLSDAQKQML 940
            +P T+ I++ LL+KGV PTP+I+ +LRKKE+QK  RK K+ A   +AQSP LS++QKQ++
Sbjct: 16   EPDTDKIKRMLLQKGVYPTPRIVRSLRKKEIQKYNRKLKRVAERQSAQSPPLSESQKQLI 75

Query: 939  XXXXXXXXXXXEYGAFKTDMEKRREGALVMSGRPWERLKAV---DLRGIWRYGEEDLGDG 769
                       EY  F   +E +  G L M GRPWERL+ V   +L G+      D    
Sbjct: 76   AEETHFLTLRSEYKEFSKAIEAKPAGGL-MVGRPWERLERVNFKELTGVRTGYNRD---- 130

Query: 768  RLKGEHLVELREMLEKRNGDEYEWLLDDDVEEASGDERVMEWKKSSP------KGLVGDE 607
             LK E L ELR++ E R  +E +W LDDDVE         EW +S        K   GD 
Sbjct: 131  SLKKESLRELRKLFETRKLEESQWALDDDVELKE------EWLESENDRYDVVKRRRGDG 184

Query: 606  EKIKWLIERLTKMDLNMKDWKFPRLMKQSGLYFSEENLLRLLEGFEVLGNWRHALSVVEW 427
            E I++L++RL+   ++M+DWKF R+M +SGL F+E  LL++L+     G W+ ALSVVEW
Sbjct: 185  EVIRFLVDRLSSGPISMRDWKFSRMMIRSGLQFNEGQLLKILDALGAKGCWKQALSVVEW 244

Query: 426  VYNEKKYRFQKSRYVYTKLLAILGKGRNPREALRIFNIMRDDSYLYPDMAAFHAIAVSLG 247
            VYN K +   KSR+VYTKLLA+LG  R P+EAL+IFN+MR D  +YPDMAA+H+IAV+LG
Sbjct: 245  VYNLKSHSHSKSRFVYTKLLAVLGMARKPQEALQIFNLMRGDGQIYPDMAAYHSIAVTLG 304

Query: 246  QAGLVKELISIIECMRQXXXXXXXXXXXKDWDPCLEPDIVIFNALLNACVPTHQWKGVFW 67
            QAGL+K+L+ +IE MRQ           K WDP +EPD+VI+NA+LNAC+PT +WKGV+W
Sbjct: 305  QAGLLKQLLKVIEFMRQQPSKKVRNKCRKSWDPAVEPDLVIYNAILNACIPTLEWKGVYW 364

Query: 66   IFKQIRSMGLKPNGATYGLAME 1
            +F Q+R  GL+PNGATYGL+ME
Sbjct: 365  VFTQLRKSGLRPNGATYGLSME 386


>ref|XP_003608531.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355509586|gb|AES90728.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 877

 Score =  345 bits (886), Expect = 1e-92
 Identities = 186/384 (48%), Positives = 255/384 (66%), Gaps = 4/384 (1%)
 Frame = -1

Query: 1140 LPRCEAKPLDPKTEVIRQRLLRKGVEPTPKILHTLRKKELQKSRRKAKKQALNAQSPRLS 961
            LP        P T+ IR+ L++KGV PTPKI+HTLRKK++QK  RK  +Q  N  +P LS
Sbjct: 12   LPLRPLSQFQPDTDKIRRSLIQKGVTPTPKIIHTLRKKQIQKHNRKLNRQ--NQLNPPLS 69

Query: 960  DAQKQMLXXXXXXXXXXXEYGAFKTDMEKRREG--ALVMSGRPWERLKAVDLRGIWRYGE 787
             +QKQ L           EY  F  ++E+ + G   L + G+PWE ++ VD     +   
Sbjct: 70   KSQKQTLEEEQHFQELKHEYKQFTQNLEENQGGNKGLCLIGKPWEGVEKVDFLERIKVNY 129

Query: 786  EDLGDGRLKGEHLVELREMLEKRNGDEYEWLLDDDVE--EASGDERVMEWKKSSPKGLVG 613
            E  G+ +LK E L+EL+EM  +R  DE +W+ +DD+E  E   DE     +K + K    
Sbjct: 130  EHRGE-KLKRESLIELKEMFRERKMDELKWVFEDDIEINEVWFDENNNGKRKKTSKR--S 186

Query: 612  DEEKIKWLIERLTKMDLNMKDWKFPRLMKQSGLYFSEENLLRLLEGFEVLGNWRHALSVV 433
            + + +++L++RL   ++  KDWKF RLMK SGL F+E  L+ ++E   V   W+ ALSVV
Sbjct: 187  EVQVVRFLVDRLCDKEIRAKDWKFSRLMKLSGLSFTEGQLMMIIEMLGVKRCWKQALSVV 246

Query: 432  EWVYNEKKYRFQKSRYVYTKLLAILGKGRNPREALRIFNIMRDDSYLYPDMAAFHAIAVS 253
            +WVYN K +R  +SR+VYTKLLA+LGK R P+EAL+IFN+M  +  +YPDMAA+H+IAV+
Sbjct: 247  QWVYNSKDHRKFQSRFVYTKLLAVLGKARRPKEALQIFNMMLGNIRVYPDMAAYHSIAVT 306

Query: 252  LGQAGLVKELISIIECMRQXXXXXXXXXXXKDWDPCLEPDIVIFNALLNACVPTHQWKGV 73
            LGQAGL+KEL++I+ECMRQ           K+WDP LEPD+VI+NA+LNACVP+ QWKGV
Sbjct: 307  LGQAGLLKELLNIVECMRQ-KPETLKYMYRKNWDPTLEPDVVIYNAVLNACVPSKQWKGV 365

Query: 72   FWIFKQIRSMGLKPNGATYGLAME 1
             W+F+Q+R   LKPNGATYGLAME
Sbjct: 366  SWVFQQMRKSSLKPNGATYGLAME 389


>ref|XP_003550974.1| PREDICTED: pentatricopeptide repeat-containing protein At5g67570,
            chloroplastic-like [Glycine max]
          Length = 865

 Score =  343 bits (881), Expect = 4e-92
 Identities = 192/391 (49%), Positives = 255/391 (65%), Gaps = 4/391 (1%)
 Frame = -1

Query: 1161 LAPPCLRLPRCEAKPLDPKTEVIRQRLLRKGVEPTPKILHTLRKKELQKSRRKAKKQALN 982
            + P  L L    A    P T+ IR+RL+ KGV+PTPKI+HTLRKKE+QK  RK K Q   
Sbjct: 1    MEPLHLHLQGHPAAQFRPNTDKIRRRLIEKGVQPTPKIVHTLRKKEIQKHNRKLKAQP-- 58

Query: 981  AQSPRLSDAQKQMLXXXXXXXXXXXEYGAFKTDMEK-RREGALVMSGRPWERLKAVDLRG 805
              +P L+ AQ Q                A +  +E  +RE   VM+G+PWE ++ V+   
Sbjct: 59   --APPLTQAQAQA--------------AAEEQHLETIKREFRRVMAGKPWEGIQKVEFLE 102

Query: 804  IWRYGEEDLGDG-RLKGEHLVELREMLEKRNGDEYEWLLDDDVE--EASGDERVMEWKKS 634
              R  E D G G +L+ E L EL+EM E R  DE +W+ D D+E  E   DE      K+
Sbjct: 103  KARRPERDCGGGEKLRRESLTELKEMFEARKMDELKWVFDADLEIDEVWFDEGYGARGKT 162

Query: 633  SPKGLVGDEEKIKWLIERLTKMDLNMKDWKFPRLMKQSGLYFSEENLLRLLEGFEVLGNW 454
              +  V   E I++L+ RL+  ++ MKDWKF R+MK SGL F+E  LLR++E       W
Sbjct: 163  QKRSEV---EVIRFLVHRLSDKEITMKDWKFSRMMKMSGLPFTEGQLLRIVELLGFKRCW 219

Query: 453  RHALSVVEWVYNEKKYRFQKSRYVYTKLLAILGKGRNPREALRIFNIMRDDSYLYPDMAA 274
            + ALSVV+WVYN K +R  +SR+VYTKLL++LGK   P EAL+IFN+MR+  ++YPD+AA
Sbjct: 220  KQALSVVQWVYNYKDHRKFQSRFVYTKLLSVLGKAGRPNEALQIFNMMRESIHIYPDIAA 279

Query: 273  FHAIAVSLGQAGLVKELISIIECMRQXXXXXXXXXXXKDWDPCLEPDIVIFNALLNACVP 94
            +H++AV+LGQAGL+KEL++I+ECMRQ           K+WDP LEPD+VI+NA+LNACVP
Sbjct: 280  YHSVAVTLGQAGLLKELLNIVECMRQ---KPKAFMHRKNWDPVLEPDVVIYNAVLNACVP 336

Query: 93   THQWKGVFWIFKQIRSMGLKPNGATYGLAME 1
            + QWKGV W+FKQ+R  GLKPNGATYGLAME
Sbjct: 337  SKQWKGVSWVFKQLRKSGLKPNGATYGLAME 367


>ref|XP_003562366.1| PREDICTED: pentatricopeptide repeat-containing protein At5g67570,
            chloroplastic-like [Brachypodium distachyon]
          Length = 858

 Score =  331 bits (849), Expect = 2e-88
 Identities = 179/377 (47%), Positives = 242/377 (64%), Gaps = 7/377 (1%)
 Frame = -1

Query: 1110 PKTEVIRQRLLRKGVEPTPKILHTLRKKELQKSRRKAKKQALNAQSPRLSD----AQKQM 943
            P TE +R+RLLRKGV PTPKILHTLRKKE  KS R+A+K    A +P  ++    AQ++ 
Sbjct: 31   PSTETLRRRLLRKGVSPTPKILHTLRKKEAHKSLRRARKDTSTANAPPTTEDSLVAQEE- 89

Query: 942  LXXXXXXXXXXXEYGAFKTDMEKRREGALVMSGRPWERLKAVDLRGIWRYGEEDLGDGRL 763
                            F+   E+ R    V+ GRPW+   +         G E LG    
Sbjct: 90   --------------ARFRAAAEEYR----VLMGRPWDGASSASGPPRGTTGNEGLGG--- 128

Query: 762  KGEHLVELREMLEKRNGDEYEWLLDDDVEEASGDERVMEWKKSSPKGL--VGDEEK-IKW 592
                   LREMLE R  D   WLL+DDVE+   D+   + ++     +  VGDEE+ I+ 
Sbjct: 129  -------LREMLEARRSDGVRWLLEDDVEKGEADDANRKQRRVGSGWISEVGDEERRIEL 181

Query: 591  LIERLTKMDLNMKDWKFPRLMKQSGLYFSEENLLRLLEGFEVLGNWRHALSVVEWVYNEK 412
            L+ RL++ DL++ DW+  R+MKQ+ L ++E+NLL++L+  E  GNWR A++V EWVYNE 
Sbjct: 182  LVSRLSEGDLSLGDWRLSRMMKQADLIYNEDNLLQILKRLETQGNWRQAVAVTEWVYNEN 241

Query: 411  KYRFQKSRYVYTKLLAILGKGRNPREALRIFNIMRDDSYLYPDMAAFHAIAVSLGQAGLV 232
             Y+ ++SR+VYTKLL+ILGK   P EALR+F IM  D+ +YPDMAA+H+IAV+LG+AGL+
Sbjct: 242  TYKHRRSRFVYTKLLSILGKSLVPTEALRVFKIMLGDAQIYPDMAAYHSIAVTLGRAGLL 301

Query: 231  KELISIIECMRQXXXXXXXXXXXKDWDPCLEPDIVIFNALLNACVPTHQWKGVFWIFKQI 52
             ELI II+ MRQ           KDWDP LEPD++I+N++LNACV + QWKGVFW+FK++
Sbjct: 302  NELIKIIDYMRQKPSKRVMRMRRKDWDPLLEPDLIIYNSVLNACVLSQQWKGVFWVFKKM 361

Query: 51   RSMGLKPNGATYGLAME 1
            R  GL P GAT+GLAME
Sbjct: 362  RFGGLTPTGATFGLAME 378