BLASTX nr result

ID: Dioscorea21_contig00005382 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00005382
         (715 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27775.3| unnamed protein product [Vitis vinifera]              309   3e-82
ref|XP_002276983.1| PREDICTED: nucleolysin TIAR isoform 1 [Vitis...   309   3e-82
ref|XP_002304117.1| predicted protein [Populus trichocarpa] gi|2...   309   4e-82
emb|CBI35841.3| unnamed protein product [Vitis vinifera]              307   1e-81
ref|XP_002270823.1| PREDICTED: nucleolysin TIAR [Vitis vinifera]      307   1e-81

>emb|CBI27775.3| unnamed protein product [Vitis vinifera]
          Length = 375

 Score =  309 bits (792), Expect = 3e-82
 Identities = 144/170 (84%), Positives = 157/170 (92%)
 Frame = -3

Query: 512 SLYHHPGLLAAPQIEPIPSGNLPPGFDSSSCRSVYVGNVHLQVTEDLLQEVFRCAGPIEG 333
           SLYHHPGLLA PQIEPI SGNLPPGFDSS+CRSVYVGN+H QVTE LLQEVF   GP+EG
Sbjct: 23  SLYHHPGLLAPPQIEPILSGNLPPGFDSSTCRSVYVGNIHPQVTEPLLQEVFSSTGPLEG 82

Query: 332 CKLIKKDKSSYGFVDYFDRRSASMAIYSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIF 153
           CKLI+K+KSSYGFVDYFDRRSA+++I +LNGRHLFGQPIKVNWAYAS QREDTSGH+NIF
Sbjct: 83  CKLIRKEKSSYGFVDYFDRRSAALSIVTLNGRHLFGQPIKVNWAYASSQREDTSGHYNIF 142

Query: 152 VGDLGPDVTDAALYACFVGYPSCSDARVMWDQKTGRSRGFGFVSFRNQQD 3
           VGDL P+VTDA L+ACF  YPSCSDARVMWDQKTGRSRGFGFVSFRNQQ+
Sbjct: 143 VGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQE 192


>ref|XP_002276983.1| PREDICTED: nucleolysin TIAR isoform 1 [Vitis vinifera]
          Length = 429

 Score =  309 bits (792), Expect = 3e-82
 Identities = 144/170 (84%), Positives = 157/170 (92%)
 Frame = -3

Query: 512 SLYHHPGLLAAPQIEPIPSGNLPPGFDSSSCRSVYVGNVHLQVTEDLLQEVFRCAGPIEG 333
           SLYHHPGLLA PQIEPI SGNLPPGFDSS+CRSVYVGN+H QVTE LLQEVF   GP+EG
Sbjct: 23  SLYHHPGLLAPPQIEPILSGNLPPGFDSSTCRSVYVGNIHPQVTEPLLQEVFSSTGPLEG 82

Query: 332 CKLIKKDKSSYGFVDYFDRRSASMAIYSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIF 153
           CKLI+K+KSSYGFVDYFDRRSA+++I +LNGRHLFGQPIKVNWAYAS QREDTSGH+NIF
Sbjct: 83  CKLIRKEKSSYGFVDYFDRRSAALSIVTLNGRHLFGQPIKVNWAYASSQREDTSGHYNIF 142

Query: 152 VGDLGPDVTDAALYACFVGYPSCSDARVMWDQKTGRSRGFGFVSFRNQQD 3
           VGDL P+VTDA L+ACF  YPSCSDARVMWDQKTGRSRGFGFVSFRNQQ+
Sbjct: 143 VGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQE 192


>ref|XP_002304117.1| predicted protein [Populus trichocarpa] gi|222841549|gb|EEE79096.1|
           predicted protein [Populus trichocarpa]
          Length = 421

 Score =  309 bits (791), Expect = 4e-82
 Identities = 143/167 (85%), Positives = 154/167 (92%)
 Frame = -3

Query: 503 HHPGLLAAPQIEPIPSGNLPPGFDSSSCRSVYVGNVHLQVTEDLLQEVFRCAGPIEGCKL 324
           +HPGLLA PQIEPIPSGNLPPGFD S+CRSVYVGN+H QVTE LLQEVF   GP+EGCKL
Sbjct: 25  YHPGLLAPPQIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFASTGPVEGCKL 84

Query: 323 IKKDKSSYGFVDYFDRRSASMAIYSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGD 144
           I+K+KSSYGF+ YFDRR+A++AI SLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGD
Sbjct: 85  IRKEKSSYGFIHYFDRRAAALAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGD 144

Query: 143 LGPDVTDAALYACFVGYPSCSDARVMWDQKTGRSRGFGFVSFRNQQD 3
           L P+VTDA LYACF  YPSCSDARVMWDQKTGRSRGFGFVSFRNQQD
Sbjct: 145 LSPEVTDATLYACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQD 191


>emb|CBI35841.3| unnamed protein product [Vitis vinifera]
          Length = 407

 Score =  307 bits (787), Expect = 1e-81
 Identities = 144/170 (84%), Positives = 157/170 (92%)
 Frame = -3

Query: 512 SLYHHPGLLAAPQIEPIPSGNLPPGFDSSSCRSVYVGNVHLQVTEDLLQEVFRCAGPIEG 333
           SLYH PGLLA PQIEPIPSGNLPPGFDSS+CRSVYVGN+H QV+E LLQEVF   GP+EG
Sbjct: 10  SLYH-PGLLAPPQIEPIPSGNLPPGFDSSTCRSVYVGNIHTQVSEPLLQEVFASTGPVEG 68

Query: 332 CKLIKKDKSSYGFVDYFDRRSASMAIYSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIF 153
           CKL++K+KSSYGF+ YFDRRSA++AI SLNGRHLFGQPIKVNWAYASGQREDTSGHFNIF
Sbjct: 69  CKLVRKEKSSYGFIHYFDRRSAALAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIF 128

Query: 152 VGDLGPDVTDAALYACFVGYPSCSDARVMWDQKTGRSRGFGFVSFRNQQD 3
           VGDL P+VTDA L+ACF  +PSCSDARVMWDQKTGRSRGFGFVSFRNQQD
Sbjct: 129 VGDLSPEVTDATLFACFSVFPSCSDARVMWDQKTGRSRGFGFVSFRNQQD 178


>ref|XP_002270823.1| PREDICTED: nucleolysin TIAR [Vitis vinifera]
          Length = 420

 Score =  307 bits (787), Expect = 1e-81
 Identities = 144/170 (84%), Positives = 157/170 (92%)
 Frame = -3

Query: 512 SLYHHPGLLAAPQIEPIPSGNLPPGFDSSSCRSVYVGNVHLQVTEDLLQEVFRCAGPIEG 333
           SLYH PGLLA PQIEPIPSGNLPPGFDSS+CRSVYVGN+H QV+E LLQEVF   GP+EG
Sbjct: 23  SLYH-PGLLAPPQIEPIPSGNLPPGFDSSTCRSVYVGNIHTQVSEPLLQEVFASTGPVEG 81

Query: 332 CKLIKKDKSSYGFVDYFDRRSASMAIYSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIF 153
           CKL++K+KSSYGF+ YFDRRSA++AI SLNGRHLFGQPIKVNWAYASGQREDTSGHFNIF
Sbjct: 82  CKLVRKEKSSYGFIHYFDRRSAALAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIF 141

Query: 152 VGDLGPDVTDAALYACFVGYPSCSDARVMWDQKTGRSRGFGFVSFRNQQD 3
           VGDL P+VTDA L+ACF  +PSCSDARVMWDQKTGRSRGFGFVSFRNQQD
Sbjct: 142 VGDLSPEVTDATLFACFSVFPSCSDARVMWDQKTGRSRGFGFVSFRNQQD 191


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