BLASTX nr result

ID: Dioscorea21_contig00005377 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00005377
         (1064 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285540.1| PREDICTED: nuclear nucleic acid-binding prot...   201   2e-49
emb|CAN80797.1| hypothetical protein VITISV_002765 [Vitis vinifera]   199   1e-48
ref|XP_004145496.1| PREDICTED: nuclear nucleic acid-binding prot...   198   2e-48
ref|XP_002309677.1| predicted protein [Populus trichocarpa] gi|2...   197   4e-48
ref|XP_002324916.1| predicted protein [Populus trichocarpa] gi|2...   197   5e-48

>ref|XP_002285540.1| PREDICTED: nuclear nucleic acid-binding protein C1D [Vitis vinifera]
          Length = 205

 Score =  201 bits (512), Expect = 2e-49
 Identities = 106/201 (52%), Positives = 139/201 (69%)
 Frame = -2

Query: 1045 EESLVPEATVEALHRTLDAVDDLQANLNEFLSIAEPDVLAELHPLQRARXXXXXXXXXXX 866
            E SLVPE+ +E++ RTL  V D+Q +L +FLS+ +P V+A+L PLQRA+           
Sbjct: 2    EGSLVPESAMESVGRTLANVKDMQTHLKDFLSLCDPQVIAQLPPLQRAQAHLTLAKATTT 61

Query: 865  XXSVRLRCSGICPDDHPIKSEFERLSLFEDKLERFTDWDREPLRPSTTLNSQAATRFIEH 686
              ++ LRC G+ PDDHPIKSE ERL L+EDKLER  D ++EPLRPST LN QAATRFIEH
Sbjct: 62   LFALNLRCKGVNPDDHPIKSELERLRLYEDKLERLMDSNKEPLRPSTILNHQAATRFIEH 121

Query: 685  SLPDLTQEQRKSMRDISRGQVNXXXXXXXXXXXXXKHQTTENLSVRSAAQEFLEKAAQEL 506
            SLPDLT EQ++SMR+ISRG+               +  +++  S+++AAQ FLEKAA+EL
Sbjct: 122  SLPDLTPEQKQSMREISRGE-GPKIKHSERSGQKKRKYSSDKQSIQNAAQAFLEKAAREL 180

Query: 505  FGSNDHGVKGPLRNETSDEED 443
             G N  G KGPL+  +SDE+D
Sbjct: 181  LGDNKDGFKGPLQVNSSDEDD 201


>emb|CAN80797.1| hypothetical protein VITISV_002765 [Vitis vinifera]
          Length = 205

 Score =  199 bits (505), Expect = 1e-48
 Identities = 104/201 (51%), Positives = 139/201 (69%)
 Frame = -2

Query: 1045 EESLVPEATVEALHRTLDAVDDLQANLNEFLSIAEPDVLAELHPLQRARXXXXXXXXXXX 866
            E S+VPE+ +E++ RTL  V D+Q +L +FLS+ +P V+A+L PLQRA+           
Sbjct: 2    EGSVVPESAMESVGRTLANVKDMQTHLKDFLSLCDPQVIAQLPPLQRAQAHLTLAKATTT 61

Query: 865  XXSVRLRCSGICPDDHPIKSEFERLSLFEDKLERFTDWDREPLRPSTTLNSQAATRFIEH 686
              ++ LRC G+ PDDHPIKSE ERL L+EDKLER  + ++EPLRPST LN QAATRFIEH
Sbjct: 62   LFALNLRCKGVNPDDHPIKSELERLRLYEDKLERLMESNKEPLRPSTILNHQAATRFIEH 121

Query: 685  SLPDLTQEQRKSMRDISRGQVNXXXXXXXXXXXXXKHQTTENLSVRSAAQEFLEKAAQEL 506
            SLPDLT EQ++SMR+ISRG+               +  +++  S+++AAQ FLEKAA+EL
Sbjct: 122  SLPDLTPEQKQSMREISRGE-GPKIKHSERSGQKKRKYSSDKQSIQNAAQAFLEKAAREL 180

Query: 505  FGSNDHGVKGPLRNETSDEED 443
             G N  G KGPL+  +SDE+D
Sbjct: 181  LGDNKDGFKGPLQVNSSDEDD 201


>ref|XP_004145496.1| PREDICTED: nuclear nucleic acid-binding protein C1D-like [Cucumis
            sativus] gi|449485203|ref|XP_004157098.1| PREDICTED:
            nuclear nucleic acid-binding protein C1D-like [Cucumis
            sativus]
          Length = 211

 Score =  198 bits (504), Expect = 2e-48
 Identities = 106/206 (51%), Positives = 142/206 (68%)
 Frame = -2

Query: 1054 GAAEESLVPEATVEALHRTLDAVDDLQANLNEFLSIAEPDVLAELHPLQRARXXXXXXXX 875
            G  + ++VPE  ++++  TLD V+ +Q +L  FLSIAEPDVLA++ PLQRA+        
Sbjct: 4    GVRDFAVVPEKVMDSVKTTLDNVEQVQTHLISFLSIAEPDVLAQMQPLQRAQSMLLLARV 63

Query: 874  XXXXXSVRLRCSGICPDDHPIKSEFERLSLFEDKLERFTDWDREPLRPSTTLNSQAATRF 695
                 +++LRCSG+  DDHPIKSE ERLSL++DKLERF    + PL+ STTLN QAATRF
Sbjct: 64   TTTLFALKLRCSGVHLDDHPIKSELERLSLYQDKLERFIGLSKAPLKRSTTLNYQAATRF 123

Query: 694  IEHSLPDLTQEQRKSMRDISRGQVNXXXXXXXXXXXXXKHQTTENLSVRSAAQEFLEKAA 515
            IEHSLPDLTQEQ+ SMRDISRG+               K+Q++E  SV++AA+EFLEKAA
Sbjct: 124  IEHSLPDLTQEQKLSMRDISRGKGQKMKQLERNVQKKRKYQSSEKQSVQTAAKEFLEKAA 183

Query: 514  QELFGSNDHGVKGPLRNETSDEEDAQ 437
            +EL G  + G++GPL  +  D++  Q
Sbjct: 184  RELLGDCNGGLQGPLCGDALDDDALQ 209


>ref|XP_002309677.1| predicted protein [Populus trichocarpa] gi|222855653|gb|EEE93200.1|
            predicted protein [Populus trichocarpa]
          Length = 212

 Score =  197 bits (501), Expect = 4e-48
 Identities = 108/203 (53%), Positives = 137/203 (67%)
 Frame = -2

Query: 1051 AAEESLVPEATVEALHRTLDAVDDLQANLNEFLSIAEPDVLAELHPLQRARXXXXXXXXX 872
            ++   +VPE+ +EA+ RTL  V  ++ +L EFLS+A PDVL E+ PLQRA+         
Sbjct: 5    SSNSDVVPESAMEAVERTLANVKQVETHLLEFLSLANPDVLDEMPPLQRAQSLFMLAKAT 64

Query: 871  XXXXSVRLRCSGICPDDHPIKSEFERLSLFEDKLERFTDWDREPLRPSTTLNSQAATRFI 692
                ++RLR +GI PD+HPIK+E ERLSL++DKLE+F D  +EPL  STTLN QAATRFI
Sbjct: 65   STLFALRLRTTGIHPDEHPIKTELERLSLYQDKLEQFVDISKEPLHRSTTLNYQAATRFI 124

Query: 691  EHSLPDLTQEQRKSMRDISRGQVNXXXXXXXXXXXXXKHQTTENLSVRSAAQEFLEKAAQ 512
            EHSLPDLT EQRKSMR+IS+G+               K  T+E  SV++AAQEFLEKAA+
Sbjct: 125  EHSLPDLTPEQRKSMRNISKGEGPKIKYTERSTRKKRKCDTSETQSVQAAAQEFLEKAAR 184

Query: 511  ELFGSNDHGVKGPLRNETSDEED 443
            ELFG +  G KGPL    S  ED
Sbjct: 185  ELFGGSTDGFKGPLIKTDSSSED 207


>ref|XP_002324916.1| predicted protein [Populus trichocarpa] gi|222866350|gb|EEF03481.1|
            predicted protein [Populus trichocarpa]
          Length = 211

 Score =  197 bits (500), Expect = 5e-48
 Identities = 107/197 (54%), Positives = 137/197 (69%)
 Frame = -2

Query: 1033 VPEATVEALHRTLDAVDDLQANLNEFLSIAEPDVLAELHPLQRARXXXXXXXXXXXXXSV 854
            VPE+T+EA+ RT+  +  ++ +L EFLS+A PDVL E+ PLQRA+             ++
Sbjct: 11   VPESTIEAVERTVANLKLVETHLLEFLSLANPDVLDEMPPLQRAQSLFMLAKATSTIFAL 70

Query: 853  RLRCSGICPDDHPIKSEFERLSLFEDKLERFTDWDREPLRPSTTLNSQAATRFIEHSLPD 674
            RLR +GI PD+HPIK+E ERLSL++DKLE+F +  +EP + STTLN QAATRFIEHSLPD
Sbjct: 71   RLRTTGIHPDEHPIKTELERLSLYQDKLEQFINISKEPSQRSTTLNYQAATRFIEHSLPD 130

Query: 673  LTQEQRKSMRDISRGQVNXXXXXXXXXXXXXKHQTTENLSVRSAAQEFLEKAAQELFGSN 494
            LT EQRKSMRDISRG+ +             K+ T+E  SV++AAQEFLEKAA+ELFG N
Sbjct: 131  LTPEQRKSMRDISRGEGSKIKYVERSTHKKRKYDTSEKQSVKAAAQEFLEKAARELFGGN 190

Query: 493  DHGVKGPLRNETSDEED 443
              G KGPL    S  +D
Sbjct: 191  TDGFKGPLVKVDSASDD 207


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