BLASTX nr result

ID: Dioscorea21_contig00005376 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00005376
         (994 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003568278.1| PREDICTED: nuclear transcription factor Y su...   225   1e-56
emb|CBH26150.1| CAAT-box DNA binding protein [Zea mays] gi|26211...   225   1e-56
gb|AFO85383.1| nuclear factor YB2 [Sorghum bicolor] gi|398559775...   224   2e-56
sp|P25209.1|NFYB_MAIZE RecName: Full=Nuclear transcription facto...   224   3e-56
ref|NP_001105435.1| nuclear transcription factor Y subunit B [Ze...   224   3e-56

>ref|XP_003568278.1| PREDICTED: nuclear transcription factor Y subunit B-like
           [Brachypodium distachyon]
          Length = 182

 Score =  225 bits (574), Expect = 1e-56
 Identities = 111/150 (74%), Positives = 123/150 (82%)
 Frame = +3

Query: 276 VREQDRYLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQKEKRK 455
           VREQDR+LPIANISRIMKKA+PANGKIAKDAKETVQECVSEFISFITSEASDKCQ+EKRK
Sbjct: 32  VREQDRFLPIANISRIMKKAIPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRK 91

Query: 456 TINGDDLLWAMATLGFEDYIEPLKLYLQKYREMEGDSKATAXXXXXXXXXXXXXIQVGTP 635
           TINGDDLLWAMATLGFEDYIEPLK+YLQKYREMEGDSK T+                GT 
Sbjct: 92  TINGDDLLWAMATLGFEDYIEPLKVYLQKYREMEGDSKLTSKSGDGSVKKDTLGPHTGTS 151

Query: 636 GTSTQGIAPQGSFTQGMSYIHTQFHNGDLS 725
            +S QG+  Q ++ QGM Y+  Q+HNGD+S
Sbjct: 152 SSSAQGMGQQVAYNQGMGYMQPQYHNGDIS 181


>emb|CBH26150.1| CAAT-box DNA binding protein [Zea mays]
           gi|262113636|emb|CBH26151.1| CAAT-box DNA binding
           protein [Zea mays]
          Length = 178

 Score =  225 bits (573), Expect = 1e-56
 Identities = 112/150 (74%), Positives = 124/150 (82%)
 Frame = +3

Query: 276 VREQDRYLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQKEKRK 455
           VREQDR+LPIANISRIMKKA+PANGKIAKDAKETVQECVSEFISFITSEASDKCQ+EKRK
Sbjct: 29  VREQDRFLPIANISRIMKKAIPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRK 88

Query: 456 TINGDDLLWAMATLGFEDYIEPLKLYLQKYREMEGDSKATAXXXXXXXXXXXXXIQVGTP 635
           TINGDDLLWAMATLGFEDYIEPLK+YLQKYREMEGDSK TA               VG  
Sbjct: 89  TINGDDLLWAMATLGFEDYIEPLKVYLQKYREMEGDSKLTAKSSDGSIKKDALG-HVGAS 147

Query: 636 GTSTQGIAPQGSFTQGMSYIHTQFHNGDLS 725
            ++ QG+  QG++ QGM Y+  Q+HNGD+S
Sbjct: 148 SSAAQGMGQQGAYNQGMGYMQPQYHNGDIS 177


>gb|AFO85383.1| nuclear factor YB2 [Sorghum bicolor] gi|398559775|gb|AFO85384.1|
           nuclear factor YB2 [Sorghum bicolor]
           gi|398559777|gb|AFO85385.1| nuclear factor YB2 [Sorghum
           bicolor] gi|398559779|gb|AFO85386.1| nuclear factor YB2
           [Sorghum bicolor]
          Length = 180

 Score =  224 bits (571), Expect = 2e-56
 Identities = 112/150 (74%), Positives = 124/150 (82%)
 Frame = +3

Query: 276 VREQDRYLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQKEKRK 455
           VREQDR+LPIANISRIMKKA+PANGKIAKDAKETVQECVSEFISFITSEASDKCQ+EKRK
Sbjct: 31  VREQDRFLPIANISRIMKKAIPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRK 90

Query: 456 TINGDDLLWAMATLGFEDYIEPLKLYLQKYREMEGDSKATAXXXXXXXXXXXXXIQVGTP 635
           TINGDDLLWAMATLGFEDYIEPLK+YLQKYREMEGDSK TA               VG  
Sbjct: 91  TINGDDLLWAMATLGFEDYIEPLKVYLQKYREMEGDSKLTAKTGDGSIKKDALG-HVGGS 149

Query: 636 GTSTQGIAPQGSFTQGMSYIHTQFHNGDLS 725
            ++ QG+  QG++ QGM Y+  Q+HNGD+S
Sbjct: 150 SSAAQGMGQQGAYNQGMGYMQPQYHNGDIS 179


>sp|P25209.1|NFYB_MAIZE RecName: Full=Nuclear transcription factor Y subunit B;
           Short=NF-YB; AltName: Full=CAAT box DNA-binding protein
           subunit B
          Length = 179

 Score =  224 bits (570), Expect = 3e-56
 Identities = 111/150 (74%), Positives = 124/150 (82%)
 Frame = +3

Query: 276 VREQDRYLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQKEKRK 455
           VREQDR+LPIANISRIMKKA+PANGKIAKDAKETVQECVSEFISFITSEASDKCQ+EKRK
Sbjct: 29  VREQDRFLPIANISRIMKKAIPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRK 88

Query: 456 TINGDDLLWAMATLGFEDYIEPLKLYLQKYREMEGDSKATAXXXXXXXXXXXXXIQVGTP 635
           TINGDDLLWAMATLGFEDYIEPLK+YLQKYREMEGDSK TA               VG  
Sbjct: 89  TINGDDLLWAMATLGFEDYIEPLKVYLQKYREMEGDSKLTAKSSDGSIKKDALG-HVGAS 147

Query: 636 GTSTQGIAPQGSFTQGMSYIHTQFHNGDLS 725
            ++ +G+  QG++ QGM Y+  Q+HNGD+S
Sbjct: 148 SSAAEGMGQQGAYNQGMGYMQPQYHNGDIS 177


>ref|NP_001105435.1| nuclear transcription factor Y subunit B [Zea mays]
           gi|22380|emb|CAA42234.1| CAAT-box DNA binding protein
           subunit B (NF-YB) [Zea mays]
          Length = 178

 Score =  224 bits (570), Expect = 3e-56
 Identities = 111/150 (74%), Positives = 124/150 (82%)
 Frame = +3

Query: 276 VREQDRYLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQKEKRK 455
           VREQDR+LPIANISRIMKKA+PANGKIAKDAKETVQECVSEFISFITSEASDKCQ+EKRK
Sbjct: 29  VREQDRFLPIANISRIMKKAIPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRK 88

Query: 456 TINGDDLLWAMATLGFEDYIEPLKLYLQKYREMEGDSKATAXXXXXXXXXXXXXIQVGTP 635
           TINGDDLLWAMATLGFEDYIEPLK+YLQKYREMEGDSK TA               VG  
Sbjct: 89  TINGDDLLWAMATLGFEDYIEPLKVYLQKYREMEGDSKLTAKSSDGSIKKDALG-HVGAS 147

Query: 636 GTSTQGIAPQGSFTQGMSYIHTQFHNGDLS 725
            ++ +G+  QG++ QGM Y+  Q+HNGD+S
Sbjct: 148 SSAAEGMGQQGAYNQGMGYMQPQYHNGDIS 177


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