BLASTX nr result

ID: Dioscorea21_contig00005372 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00005372
         (368 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328036.1| predicted protein [Populus trichocarpa] gi|2...    78   6e-13
ref|XP_002328035.1| predicted protein [Populus trichocarpa] gi|2...    78   8e-13
ref|XP_002509430.1| Protein SIS1, putative [Ricinus communis] gi...    77   1e-12
ref|XP_002309764.1| predicted protein [Populus trichocarpa] gi|2...    77   1e-12
ref|XP_002309761.1| predicted protein [Populus trichocarpa] gi|2...    76   2e-12

>ref|XP_002328036.1| predicted protein [Populus trichocarpa] gi|222837445|gb|EEE75824.1|
           predicted protein [Populus trichocarpa]
          Length = 354

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 36/40 (90%), Positives = 39/40 (97%)
 Frame = +3

Query: 3   GMPLPKDPTKKGNLRIKFNIKFPTRLTAEQKAGIKRLLGP 122
           GMP+ KDPTK+GNLRIKF+IKFPTRLTAEQKAGIKRLLGP
Sbjct: 315 GMPIQKDPTKRGNLRIKFDIKFPTRLTAEQKAGIKRLLGP 354


>ref|XP_002328035.1| predicted protein [Populus trichocarpa] gi|222837444|gb|EEE75823.1|
           predicted protein [Populus trichocarpa]
          Length = 348

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 34/40 (85%), Positives = 39/40 (97%)
 Frame = +3

Query: 3   GMPLPKDPTKKGNLRIKFNIKFPTRLTAEQKAGIKRLLGP 122
           GMP+PKDPTK+GNLRIKF++KFPTRLTAEQKAGIK L+GP
Sbjct: 309 GMPIPKDPTKRGNLRIKFSVKFPTRLTAEQKAGIKTLMGP 348


>ref|XP_002509430.1| Protein SIS1, putative [Ricinus communis]
           gi|223549329|gb|EEF50817.1| Protein SIS1, putative
           [Ricinus communis]
          Length = 342

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 34/40 (85%), Positives = 39/40 (97%)
 Frame = +3

Query: 3   GMPLPKDPTKKGNLRIKFNIKFPTRLTAEQKAGIKRLLGP 122
           GMP+PKDP+KKGNLRIKFNIKFPTRLTAEQ++GIK+LL P
Sbjct: 303 GMPIPKDPSKKGNLRIKFNIKFPTRLTAEQRSGIKKLLAP 342


>ref|XP_002309764.1| predicted protein [Populus trichocarpa] gi|222852667|gb|EEE90214.1|
           predicted protein [Populus trichocarpa]
          Length = 348

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 34/40 (85%), Positives = 39/40 (97%)
 Frame = +3

Query: 3   GMPLPKDPTKKGNLRIKFNIKFPTRLTAEQKAGIKRLLGP 122
           GMP+PKDPTK+GNLRIKF+IKFPTRLT+EQKAGIK L+GP
Sbjct: 309 GMPIPKDPTKRGNLRIKFSIKFPTRLTSEQKAGIKSLMGP 348


>ref|XP_002309761.1| predicted protein [Populus trichocarpa] gi|222852664|gb|EEE90211.1|
           predicted protein [Populus trichocarpa]
          Length = 110

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 35/39 (89%), Positives = 38/39 (97%)
 Frame = +3

Query: 3   GMPLPKDPTKKGNLRIKFNIKFPTRLTAEQKAGIKRLLG 119
           GMP+ KDPTK+GNLRIKFNIKFPTRLTAEQKAGIK+LLG
Sbjct: 72  GMPIQKDPTKRGNLRIKFNIKFPTRLTAEQKAGIKKLLG 110


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