BLASTX nr result

ID: Dioscorea21_contig00005362 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00005362
         (1027 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635272.1| PREDICTED: clathrin light chain 1-like [Viti...   274   2e-71
emb|CAN72815.1| hypothetical protein VITISV_004099 [Vitis vinifera]   270   4e-70
ref|XP_002329764.1| predicted protein [Populus trichocarpa] gi|2...   246   6e-63
ref|XP_003542762.1| PREDICTED: uncharacterized protein LOC100788...   246   8e-63
gb|ABK93243.1| unknown [Populus trichocarpa]                          246   8e-63

>ref|XP_003635272.1| PREDICTED: clathrin light chain 1-like [Vitis vinifera]
          Length = 375

 Score =  274 bits (701), Expect = 2e-71
 Identities = 171/350 (48%), Positives = 195/350 (55%), Gaps = 53/350 (15%)
 Frame = -2

Query: 894  SSTGPFDDDEYLGYDSGLPSEHYESYSSFPADED-------PKGVPPDADDVPIA----- 751
            SS  PFDDD ++ YD  LPS  ++SY+SF   +D       P G  P  D+V +      
Sbjct: 17   SSNRPFDDDTFVEYDPSLPSRRFDSYASFATADDYAADDAPPAGGFPVEDEVTVDHVSHN 76

Query: 750  VGGGGSIPNSPEGYGFMSAPFSD------------------SXXXXXXXXXXXEIFEPDE 625
            V G   +P     YGF  +  +D                  +           +IF  D 
Sbjct: 77   VDGVHPLPGM---YGFEGSSMADDPNPNFSEDSFSVPIANGNGKPYDISADNEDIFSSDG 133

Query: 624  PSLPPPEQMQPEEGFAFREWRRQNMIFLXXXXXXXXEMRNQIIAEAEEYKRAFYEKRKLN 445
            P LPPP +MQPEEGF  REWRRQN I L        EMRNQII EAEEYKRAFYEKRK+N
Sbjct: 134  PVLPPPTEMQPEEGFILREWRRQNAIQLEEKEKREKEMRNQIIEEAEEYKRAFYEKRKVN 193

Query: 444  CETNKTNNREREKLYLANQEKFHKNADKQYWKAIAELIPYEVPNIEKRRSKKDQEKKPSI 265
             ETNKTNNREREKLYLANQEKFHK ADKQYWKAIAELIP+EVPNIEK+R KKD +KKPSI
Sbjct: 194  IETNKTNNREREKLYLANQEKFHKEADKQYWKAIAELIPHEVPNIEKKRGKKDPDKKPSI 253

Query: 264  TVIQGPKPGKPTDLSRMRQLLVKL--XXXXXXXXXXXXXXPEVKDGA----ATATKDGKK 103
            TVIQGPKPGKPTDLSRMR +LVKL                 + KDG         KDGK 
Sbjct: 254  TVIQGPKPGKPTDLSRMRHILVKLKHTPPPHMLPPPPPPAKDAKDGKDAKDGKNAKDGKD 313

Query: 102  DET---------KPAAPAPGTEPKT--------NGDTNKPKEEAVVVVTE 4
             ++         K A P  G  P T        NG  + P E+AV V  E
Sbjct: 314  KDSKNAKDVKDGKDATPTTGEAPTTPAAKDATSNGSPDTP-EQAVPVAAE 362


>emb|CAN72815.1| hypothetical protein VITISV_004099 [Vitis vinifera]
          Length = 322

 Score =  270 bits (690), Expect = 4e-70
 Identities = 159/306 (51%), Positives = 181/306 (59%), Gaps = 36/306 (11%)
 Frame = -2

Query: 894 SSTGPFDDDEYLGYDSGLPSEHYESYSSFPADED-------PKGVPPDADDVPIA----- 751
           SS  PFDDD ++ YD  LPS  ++SY+SF   +D       P G  P  D+V +      
Sbjct: 17  SSNRPFDDDTFVEYDPSLPSRRFDSYASFATADDYAADDAPPAGGFPVEDEVTVDHVSHN 76

Query: 750 VGGGGSIPNSPEGYGFMSAPFSD------------------SXXXXXXXXXXXEIFEPDE 625
           V G   +P     YGF  +  +D                  +           +IF  D 
Sbjct: 77  VDGVHPLPGM---YGFEGSSMADDPNPNFSEDSFSVPIANGNGKPYDISADNEDIFSSDG 133

Query: 624 PSLPPPEQMQPEEGFAFREWRRQNMIFLXXXXXXXXEMRNQIIAEAEEYKRAFYEKRKLN 445
           P LPPP +MQPEEGF  REWRRQN I L        EMRNQII EAEEYKRAFYEKRK+N
Sbjct: 134 PVLPPPTEMQPEEGFILREWRRQNAIQLEEKEKREKEMRNQIIEEAEEYKRAFYEKRKVN 193

Query: 444 CETNKTNNREREKLYLANQEKFHKNADKQYWKAIAELIPYEVPNIEKRRSKKDQEKKPSI 265
            ETNKTNNREREKLYLANQEKFHK ADKQYWKAIAELIP+EVPNIEK+R KKD +KKPSI
Sbjct: 194 IETNKTNNREREKLYLANQEKFHKEADKQYWKAIAELIPHEVPNIEKKRGKKDPDKKPSI 253

Query: 264 TVIQGPKPGKPTDLSRMRQLLVKL--XXXXXXXXXXXXXXPEVKDGA----ATATKDGKK 103
           TVIQGPKPGKPTDLSRMR +LVKL                 + KDG         KDGK 
Sbjct: 254 TVIQGPKPGKPTDLSRMRHILVKLKHTPPPHMLPPPPPPAKDAKDGKDAKDGKNAKDGKD 313

Query: 102 DETKPA 85
            ++K A
Sbjct: 314 KDSKNA 319


>ref|XP_002329764.1| predicted protein [Populus trichocarpa] gi|222870826|gb|EEF07957.1|
           predicted protein [Populus trichocarpa]
          Length = 324

 Score =  246 bits (628), Expect = 6e-63
 Identities = 152/306 (49%), Positives = 169/306 (55%), Gaps = 14/306 (4%)
 Frame = -2

Query: 900 QPSSTGPFD---DDEYLGYDSGLPSEHYESYSSFPADEDPKGVPPDADDVPIAVGGGGSI 730
           QPS+  PFD   D+ Y  + S      Y + ++ P +    GV  D       V G GS 
Sbjct: 11  QPSNHTPFDEVDDESYSNFSS------YSTAAAAPGEFSGGGVSVDHVSASPDVFGFGSN 64

Query: 729 --PNSPEGYGFMSAPFSDSXXXXXXXXXXXEIFEPDEPSLPPPEQMQPEEGFAFREWRRQ 556
             P  P    F S    +              F  D P LPPP +M+PEEGFA REWRRQ
Sbjct: 65  ADPGYPHQSPFGSVHVENGNGSNGYNGADDGFFVSDGPILPPPTEMEPEEGFALREWRRQ 124

Query: 555 NMIFLXXXXXXXXEMRNQIIAEAEEYKRAFYEKRKLNCETNKTNNREREKLYLANQEKFH 376
           N + L        +MR QII E EEY R FYEKRKLN ETN   NREREKLYLANQEKFH
Sbjct: 125 NAMHLEEKEKREKDMRKQIIEEGEEYIRGFYEKRKLNIETNIATNREREKLYLANQEKFH 184

Query: 375 KNADKQYWKAIAELIPYEVPNIEKRRSK--KDQEKKPSITVIQGPKPGKPTDLSRMRQLL 202
           K ADKQYWKAIAELIP EVPNIEK+R K  KDQ+K PSITVIQGPKPGKPTDLSR+R LL
Sbjct: 185 KEADKQYWKAIAELIPREVPNIEKKRGKKDKDQDKMPSITVIQGPKPGKPTDLSRLRHLL 244

Query: 201 VKL-------XXXXXXXXXXXXXXPEVKDGAATATKDGKKDETKPAAPAPGTEPKTNGDT 43
           VKL                      E KD  A AT  G K E  P A     E   NG +
Sbjct: 245 VKLKHTPPPHMIPPPPPPKDAKDGKEGKDATAGATVSGTKGEAAPVA----KEATANGSS 300

Query: 42  NKPKEE 25
           N PKE+
Sbjct: 301 NTPKED 306


>ref|XP_003542762.1| PREDICTED: uncharacterized protein LOC100788673 [Glycine max]
          Length = 303

 Score =  246 bits (627), Expect = 8e-63
 Identities = 146/302 (48%), Positives = 176/302 (58%), Gaps = 17/302 (5%)
 Frame = -2

Query: 876 DDDEYLGYDSGLPSEHYESYSSFPADEDPKGVPPDADDVPIAVGGGGSIPNSPEGYGFMS 697
           DDD +    +      Y  +SSFP+D+    VP D  D             SPE +GF  
Sbjct: 11  DDDHFAAPAAADTFSGYPDFSSFPSDD----VPVDYADTAA----------SPEIFGFSD 56

Query: 696 -------APFS----DSXXXXXXXXXXXEIFEPDEPSLPPPEQMQPEEGFAFREWRRQNM 550
                  +PF     +             +F  + P LPPP +M+PEEG+  REWRRQN+
Sbjct: 57  PGPVYSQSPFEQVHENGNGNGTENGYGDGVFVSNGPVLPPPGEMEPEEGYVLREWRRQNV 116

Query: 549 IFLXXXXXXXXEMRNQIIAEAEEYKRAFYEKRKLNCETNKTNNREREKLYLANQEKFHKN 370
           I L        EMR +II EAEEYK AFYEKRKLN ETNK  N+EREKLYLANQEKFHK 
Sbjct: 117 IQLEEKEKREKEMRLKIIEEAEEYKVAFYEKRKLNVETNKVQNKEREKLYLANQEKFHKE 176

Query: 369 ADKQYWKAIAELIPYEVPNIEKRRSKKDQEKKPSITVIQGPKPGKPTDLSRMRQLLVKL- 193
           ADK YWKAI E+IP EVPNIEK+RSKKDQE KPSITV+QGPKPGKPTDLSR+RQ+L+KL 
Sbjct: 177 ADKNYWKAIGEIIPREVPNIEKKRSKKDQENKPSITVVQGPKPGKPTDLSRLRQILLKLK 236

Query: 192 -XXXXXXXXXXXXXXPEVKDGAATATKDGKKDETKPAAPAPGTEPK----TNGDTNKPKE 28
                           + KDG     KDGK+  +K    AP ++PK     N  T+ P++
Sbjct: 237 HTPPAHMIPPPPAPAKDAKDG-----KDGKETASKANGAAPASQPKDATTNNAATDLPQK 291

Query: 27  EA 22
           EA
Sbjct: 292 EA 293


>gb|ABK93243.1| unknown [Populus trichocarpa]
          Length = 326

 Score =  246 bits (627), Expect = 8e-63
 Identities = 152/308 (49%), Positives = 170/308 (55%), Gaps = 16/308 (5%)
 Frame = -2

Query: 900 QPSSTGPFD---DDEYLGYDSGLPSEHYESYSSFPADEDPKGVPPDADDV---PIAVG-G 742
           QPS+  PFD   D+ Y  + S      Y + ++ PA  +  G     D V   P   G G
Sbjct: 11  QPSNHTPFDEVDDESYSNFSS------YSTAAAAPAPGEFSGGGVSVDHVSASPDVFGFG 64

Query: 741 GGSIPNSPEGYGFMSAPFSDSXXXXXXXXXXXEIFEPDEPSLPPPEQMQPEEGFAFREWR 562
             + P  P    F S    +              F  D P LPPP +M+PEEGFA REWR
Sbjct: 65  SNADPGYPHQSPFGSVHVENGNGSNGYNGADDGFFVSDGPILPPPTEMEPEEGFALREWR 124

Query: 561 RQNMIFLXXXXXXXXEMRNQIIAEAEEYKRAFYEKRKLNCETNKTNNREREKLYLANQEK 382
           RQN + L        +MR QII E EEY R FYEKRKLN ETN   NREREKLYLANQEK
Sbjct: 125 RQNAMHLEEKEKREKDMRKQIIEEGEEYIRGFYEKRKLNIETNIATNREREKLYLANQEK 184

Query: 381 FHKNADKQYWKAIAELIPYEVPNIEKRRSK--KDQEKKPSITVIQGPKPGKPTDLSRMRQ 208
           FHK ADKQYWKAIAELIP EVPNIEK+R K  KDQ+K PSITVIQGPKPGKPTDLSR+R 
Sbjct: 185 FHKEADKQYWKAIAELIPREVPNIEKKRGKKDKDQDKMPSITVIQGPKPGKPTDLSRLRH 244

Query: 207 LLVKL-------XXXXXXXXXXXXXXPEVKDGAATATKDGKKDETKPAAPAPGTEPKTNG 49
           LLVKL                      E KD  A AT  G K E  P A     E   NG
Sbjct: 245 LLVKLKHTPPPHMVPPPPPPKDAKDGKEGKDATAGATVSGTKGEAAPVA----KEATANG 300

Query: 48  DTNKPKEE 25
            +N PKE+
Sbjct: 301 SSNTPKED 308


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