BLASTX nr result

ID: Dioscorea21_contig00005351 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00005351
         (1224 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001046448.1| Os02g0252100 [Oryza sativa Japonica Group] g...   201   2e-49
gb|EEE56668.1| hypothetical protein OsJ_06104 [Oryza sativa Japo...   201   2e-49
gb|EEC72843.1| hypothetical protein OsI_06591 [Oryza sativa Indi...   201   2e-49
ref|NP_001067091.1| Os12g0572400 [Oryza sativa Japonica Group] g...   194   5e-47
gb|EEC69539.1| hypothetical protein OsI_38819 [Oryza sativa Indi...   194   5e-47

>ref|NP_001046448.1| Os02g0252100 [Oryza sativa Japonica Group]
            gi|47497118|dbj|BAD19168.1| putative pre-mRNA splicing
            factor [Oryza sativa Japonica Group]
            gi|47497696|dbj|BAD19762.1| putative pre-mRNA splicing
            factor [Oryza sativa Japonica Group]
            gi|66394215|gb|AAG43284.2| pre-mRNA splicing factor
            [Oryza sativa] gi|113535979|dbj|BAF08362.1| Os02g0252100
            [Oryza sativa Japonica Group]
            gi|215704460|dbj|BAG93894.1| unnamed protein product
            [Oryza sativa Japonica Group]
          Length = 265

 Score =  201 bits (512), Expect = 2e-49
 Identities = 106/200 (53%), Positives = 127/200 (63%)
 Frame = -1

Query: 1029 KDQNSRSLLVRNIPLNARAEDLRVPFERYGPVRDVYMPKDYYTGEPRGFAFVEFVDPYDA 850
            K+Q S SLLVRNIPL+ RAEDLRVPFER+GPVRDVY+PKDYYTGEPRGFAFVEFVDPYDA
Sbjct: 32   KEQGSGSLLVRNIPLSCRAEDLRVPFERFGPVRDVYLPKDYYTGEPRGFAFVEFVDPYDA 91

Query: 849  SEAQYRMNGQRFGGRVITVVVAAETRKKPDEMRHRERPRGPSGHDVXXXXXXXXXXXXXX 670
            SEAQY MN Q   GR ITVV+AAE+RK+P+EMR R R RG S H+               
Sbjct: 92   SEAQYHMNRQVVFGREITVVLAAESRKRPEEMRSRARVRGYSDHEGRRSSHYGRSRSRSR 151

Query: 669  XXXXXXXXXXXXXXXXXXXXXXXDYSVSPRRRHKEHTRSPRDHPQGREEDRDRRSYSPSH 490
                                   DYS SP+R+     +SPR  P+  E D+ RRSYSP++
Sbjct: 152  SRSPRYRGRPRSRSYSPAPRRRDDYSASPQRKDTHRAKSPRRQPKEHEVDKKRRSYSPAN 211

Query: 489  SDANHNKNDNGYDDKAYDAE 430
             D +    DNGY+ ++  A+
Sbjct: 212  KDGDRRDADNGYEKRSPPAD 231


>gb|EEE56668.1| hypothetical protein OsJ_06104 [Oryza sativa Japonica Group]
          Length = 304

 Score =  201 bits (512), Expect = 2e-49
 Identities = 106/200 (53%), Positives = 127/200 (63%)
 Frame = -1

Query: 1029 KDQNSRSLLVRNIPLNARAEDLRVPFERYGPVRDVYMPKDYYTGEPRGFAFVEFVDPYDA 850
            K+Q S SLLVRNIPL+ RAEDLRVPFER+GPVRDVY+PKDYYTGEPRGFAFVEFVDPYDA
Sbjct: 71   KEQGSGSLLVRNIPLSCRAEDLRVPFERFGPVRDVYLPKDYYTGEPRGFAFVEFVDPYDA 130

Query: 849  SEAQYRMNGQRFGGRVITVVVAAETRKKPDEMRHRERPRGPSGHDVXXXXXXXXXXXXXX 670
            SEAQY MN Q   GR ITVV+AAE+RK+P+EMR R R RG S H+               
Sbjct: 131  SEAQYHMNRQVVFGREITVVLAAESRKRPEEMRSRARVRGYSDHEGRRSSHYGRSRSRSR 190

Query: 669  XXXXXXXXXXXXXXXXXXXXXXXDYSVSPRRRHKEHTRSPRDHPQGREEDRDRRSYSPSH 490
                                   DYS SP+R+     +SPR  P+  E D+ RRSYSP++
Sbjct: 191  SRSPRYRGRPRSRSYSPAPRRRDDYSASPQRKDTHRAKSPRRQPKEHEVDKKRRSYSPAN 250

Query: 489  SDANHNKNDNGYDDKAYDAE 430
             D +    DNGY+ ++  A+
Sbjct: 251  KDGDRRDADNGYEKRSPPAD 270


>gb|EEC72843.1| hypothetical protein OsI_06591 [Oryza sativa Indica Group]
          Length = 289

 Score =  201 bits (512), Expect = 2e-49
 Identities = 106/200 (53%), Positives = 127/200 (63%)
 Frame = -1

Query: 1029 KDQNSRSLLVRNIPLNARAEDLRVPFERYGPVRDVYMPKDYYTGEPRGFAFVEFVDPYDA 850
            K+Q S SLLVRNIPL+ RAEDLRVPFER+GPVRDVY+PKDYYTGEPRGFAFVEFVDPYDA
Sbjct: 56   KEQGSGSLLVRNIPLSCRAEDLRVPFERFGPVRDVYLPKDYYTGEPRGFAFVEFVDPYDA 115

Query: 849  SEAQYRMNGQRFGGRVITVVVAAETRKKPDEMRHRERPRGPSGHDVXXXXXXXXXXXXXX 670
            SEAQY MN Q   GR ITVV+AAE+RK+P+EMR R R RG S H+               
Sbjct: 116  SEAQYHMNRQVVFGREITVVLAAESRKRPEEMRSRARVRGYSDHEGRRSSHYGRSRSRSR 175

Query: 669  XXXXXXXXXXXXXXXXXXXXXXXDYSVSPRRRHKEHTRSPRDHPQGREEDRDRRSYSPSH 490
                                   DYS SP+R+     +SPR  P+  E D+ RRSYSP++
Sbjct: 176  SRSPRYRGRPRSRSYSPAPRRRDDYSASPQRKDTHRAKSPRRQPKEHEVDKKRRSYSPAN 235

Query: 489  SDANHNKNDNGYDDKAYDAE 430
             D +    DNGY+ ++  A+
Sbjct: 236  KDGDRRDADNGYEKRSPPAD 255


>ref|NP_001067091.1| Os12g0572400 [Oryza sativa Japonica Group] gi|77556878|gb|ABA99674.1|
            RNA recognition motif family protein, expressed [Oryza
            sativa Japonica Group] gi|113649598|dbj|BAF30110.1|
            Os12g0572400 [Oryza sativa Japonica Group]
            gi|215694562|dbj|BAG89555.1| unnamed protein product
            [Oryza sativa Japonica Group] gi|222617335|gb|EEE53467.1|
            hypothetical protein OsJ_36595 [Oryza sativa Japonica
            Group]
          Length = 263

 Score =  194 bits (492), Expect = 5e-47
 Identities = 103/196 (52%), Positives = 126/196 (64%)
 Frame = -1

Query: 1029 KDQNSRSLLVRNIPLNARAEDLRVPFERYGPVRDVYMPKDYYTGEPRGFAFVEFVDPYDA 850
            ++Q S SLLVRNIPL+ R EDLRVPFER+GPVRDVY+PKDYY+GEPRGFAFVEFVDPYDA
Sbjct: 32   REQGSGSLLVRNIPLSCRGEDLRVPFERFGPVRDVYLPKDYYSGEPRGFAFVEFVDPYDA 91

Query: 849  SEAQYRMNGQRFGGRVITVVVAAETRKKPDEMRHRERPRGPSGHDVXXXXXXXXXXXXXX 670
            SEAQY MN Q F GR ITVV+AAE+RK+P+EMR R R RG SG++               
Sbjct: 92   SEAQYHMNRQVFFGREITVVLAAESRKRPEEMRSRARVRGYSGNE--GRRSSYYGRSRSR 149

Query: 669  XXXXXXXXXXXXXXXXXXXXXXXDYSVSPRRRHKEHTRSPRDHPQGREEDRDRRSYSPSH 490
                                   DYS SP R+    T+SPR  P+  +E++ RRSYSP+ 
Sbjct: 150  SRSPHYRGRPRSRSYSPAPRRRDDYSASPPRKDTHPTKSPRRQPKEHDEEKKRRSYSPAS 209

Query: 489  SDANHNKNDNGYDDKA 442
             D +    DNGY+ ++
Sbjct: 210  RDGDPRDADNGYEKRS 225


>gb|EEC69539.1| hypothetical protein OsI_38819 [Oryza sativa Indica Group]
          Length = 263

 Score =  194 bits (492), Expect = 5e-47
 Identities = 103/196 (52%), Positives = 126/196 (64%)
 Frame = -1

Query: 1029 KDQNSRSLLVRNIPLNARAEDLRVPFERYGPVRDVYMPKDYYTGEPRGFAFVEFVDPYDA 850
            ++Q S SLLVRNIPL+ R EDLRVPFER+GPVRDVY+PKDYY+GEPRGFAFVEFVDPYDA
Sbjct: 32   REQGSGSLLVRNIPLSCRGEDLRVPFERFGPVRDVYLPKDYYSGEPRGFAFVEFVDPYDA 91

Query: 849  SEAQYRMNGQRFGGRVITVVVAAETRKKPDEMRHRERPRGPSGHDVXXXXXXXXXXXXXX 670
            SEAQY MN Q F GR ITVV+AAE+RK+P+EMR R R RG SG++               
Sbjct: 92   SEAQYHMNRQVFFGREITVVLAAESRKRPEEMRSRARVRGYSGNE--GRRSSYYGRSRSR 149

Query: 669  XXXXXXXXXXXXXXXXXXXXXXXDYSVSPRRRHKEHTRSPRDHPQGREEDRDRRSYSPSH 490
                                   DYS SP R+    T+SPR  P+  +E++ RRSYSP+ 
Sbjct: 150  SRSPRYRGRPRSRSYSPAPRRRDDYSASPPRKDTHPTKSPRRQPKEHDEEKKRRSYSPAS 209

Query: 489  SDANHNKNDNGYDDKA 442
             D +    DNGY+ ++
Sbjct: 210  RDGDPRDADNGYEKRS 225


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