BLASTX nr result

ID: Dioscorea21_contig00005340 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00005340
         (1231 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EAY79639.1| hypothetical protein OsI_34783 [Oryza sativa Indi...   152   2e-34
gb|ABB48027.2| Poly polymerase catalytic domain containing prote...   151   3e-34
gb|ABB48029.2| Poly polymerase catalytic domain containing prote...   151   3e-34
gb|ABB48028.2| Poly polymerase catalytic domain containing prote...   151   3e-34
gb|ABB48030.1| Poly polymerase catalytic domain containing prote...   151   3e-34

>gb|EAY79639.1| hypothetical protein OsI_34783 [Oryza sativa Indica Group]
          Length = 591

 Score =  152 bits (383), Expect = 2e-34
 Identities = 101/271 (37%), Positives = 133/271 (49%), Gaps = 4/271 (1%)
 Frame = +3

Query: 429  ADCFTDGNGGPALGHHQRILDQSSENCYGNAATEDGKAGFYCCSQKHMLQNYQNFMKSGL 608
            A C  D      L  H+   D S    Y     E  KA   C     ++Q+YQNFM S L
Sbjct: 27   AACCADAGNTSKL--HKHPADNSVVRFY---VDEGHKAKIKCHFNMQIIQSYQNFMTSAL 81

Query: 609  PQRVLFYQDDEWKDFPGSINSLVREDFKRKKAVTEVIHESQRLLLNFFSMVLINLGTGFQ 788
            P+R+L  Q  EWKDFP  I  L   DF+ KK +TE  H++   LL+F  M  I+  TG Q
Sbjct: 82   PKRILLRQGGEWKDFPKQIVKLAHSDFRTKKTITEGEHQTHLFLLDFVHMTFIDSKTGLQ 141

Query: 789  KPVAWIDEHGKCFFPELYSEFCAPNGCFHSDKGHDVHMSCRRNGTREPETK-NVFVSAAE 965
            +P+AWIDE+GK +FPE + E            G++V++    NGT+E         S+AE
Sbjct: 142  RPIAWIDENGKQYFPEFFIEDKTLYRKKELGNGNNVYIIVEPNGTQEMNDHFGTSESSAE 201

Query: 966  SSNSEVPDYAIISNGNHTKEISAGFQERAEIYETTGENES---CPLLATGPIQEKSAKPA 1136
            SSN E     + S      E S    +   + ET GENE     P+      Q+K    +
Sbjct: 202  SSNFEFSTDDVSSPKRAKAERSVAGNKTGGVKETIGENEPHALLPIPCRSLPQDKLGDHS 261

Query: 1137 TVPDVYSAVQNILLLGLGQYIAPKDIVGIFR 1229
             V    SAVQ +LL GLG  +  KDIVGI+R
Sbjct: 262  RVQLAISAVQKLLLQGLGTVLGSKDIVGIYR 292


>gb|ABB48027.2| Poly polymerase catalytic domain containing protein, expressed [Oryza
            sativa Japonica Group]
          Length = 542

 Score =  151 bits (382), Expect = 3e-34
 Identities = 107/298 (35%), Positives = 143/298 (47%), Gaps = 6/298 (2%)
 Frame = +3

Query: 354  MEPKNVKVLGNGKKAITDINHA--TIFADCFTDGNGGPALGHHQRILDQSSENCYGNAAT 527
            M   N KVL    + I+ +        A C   GN       H+   D S    Y     
Sbjct: 1    MAAMNEKVLDKCGRNISSLKRKRDNPAARCADAGNTSKL---HKHPADNSVVRFY---VD 54

Query: 528  EDGKAGFYCCSQKHMLQNYQNFMKSGLPQRVLFYQDDEWKDFPGSINSLVREDFKRKKAV 707
            E  KA   C  +  ++Q+YQNFM S LP+R+L  Q  EWKDFP  I  L   DF+ KK +
Sbjct: 55   EGHKAKIKCHFKMQIIQSYQNFMTSALPKRILLRQGGEWKDFPKQIVKLAHSDFRTKKTI 114

Query: 708  TEVIHESQRLLLNFFSMVLINLGTGFQKPVAWIDEHGKCFFPELYSEFCAPNGCFHSDKG 887
            TE  H++   LL+F  M  I+  TG Q+P+AWIDE+GK +FPE + E            G
Sbjct: 115  TEGEHQTHLFLLDFVHMTFIDSKTGLQRPIAWIDENGKQYFPEFFIEDKTLYRKKELGNG 174

Query: 888  HDVHMSCRRNGTREPETK-NVFVSAAESSNSEVPDYAIISNGNHTKEISAGFQERAEIYE 1064
            ++V++    NGT+E         S+AESSN E     + S      E S    +   + E
Sbjct: 175  NNVYIIVEPNGTQEMNDHFGTSESSAESSNFESSTDDVSSPKRAKAERSVAGNKTGGVKE 234

Query: 1065 TTGENES---CPLLATGPIQEKSAKPATVPDVYSAVQNILLLGLGQYIAPKDIVGIFR 1229
            T GENE     P+      Q+K    + V    SAVQ +LL GLG  +  KDIVGI+R
Sbjct: 235  TIGENEPHALLPIPCRSLPQDKLGDHSRVQLAISAVQKLLLQGLGTVLGSKDIVGIYR 292


>gb|ABB48029.2| Poly polymerase catalytic domain containing protein, expressed [Oryza
            sativa Japonica Group]
          Length = 512

 Score =  151 bits (382), Expect = 3e-34
 Identities = 107/298 (35%), Positives = 143/298 (47%), Gaps = 6/298 (2%)
 Frame = +3

Query: 354  MEPKNVKVLGNGKKAITDINHA--TIFADCFTDGNGGPALGHHQRILDQSSENCYGNAAT 527
            M   N KVL    + I+ +        A C   GN       H+   D S    Y     
Sbjct: 1    MAAMNEKVLDKCGRNISSLKRKRDNPAARCADAGNTSKL---HKHPADNSVVRFY---VD 54

Query: 528  EDGKAGFYCCSQKHMLQNYQNFMKSGLPQRVLFYQDDEWKDFPGSINSLVREDFKRKKAV 707
            E  KA   C  +  ++Q+YQNFM S LP+R+L  Q  EWKDFP  I  L   DF+ KK +
Sbjct: 55   EGHKAKIKCHFKMQIIQSYQNFMTSALPKRILLRQGGEWKDFPKQIVKLAHSDFRTKKTI 114

Query: 708  TEVIHESQRLLLNFFSMVLINLGTGFQKPVAWIDEHGKCFFPELYSEFCAPNGCFHSDKG 887
            TE  H++   LL+F  M  I+  TG Q+P+AWIDE+GK +FPE + E            G
Sbjct: 115  TEGEHQTHLFLLDFVHMTFIDSKTGLQRPIAWIDENGKQYFPEFFIEDKTLYRKKELGNG 174

Query: 888  HDVHMSCRRNGTREPETK-NVFVSAAESSNSEVPDYAIISNGNHTKEISAGFQERAEIYE 1064
            ++V++    NGT+E         S+AESSN E     + S      E S    +   + E
Sbjct: 175  NNVYIIVEPNGTQEMNDHFGTSESSAESSNFESSTDDVSSPKRAKAERSVAGNKTGGVKE 234

Query: 1065 TTGENES---CPLLATGPIQEKSAKPATVPDVYSAVQNILLLGLGQYIAPKDIVGIFR 1229
            T GENE     P+      Q+K    + V    SAVQ +LL GLG  +  KDIVGI+R
Sbjct: 235  TIGENEPHALLPIPCRSLPQDKLGDHSRVQLAISAVQKLLLQGLGTVLGSKDIVGIYR 292


>gb|ABB48028.2| Poly polymerase catalytic domain containing protein, expressed [Oryza
            sativa Japonica Group]
          Length = 499

 Score =  151 bits (382), Expect = 3e-34
 Identities = 107/298 (35%), Positives = 143/298 (47%), Gaps = 6/298 (2%)
 Frame = +3

Query: 354  MEPKNVKVLGNGKKAITDINHA--TIFADCFTDGNGGPALGHHQRILDQSSENCYGNAAT 527
            M   N KVL    + I+ +        A C   GN       H+   D S    Y     
Sbjct: 1    MAAMNEKVLDKCGRNISSLKRKRDNPAARCADAGNTSKL---HKHPADNSVVRFY---VD 54

Query: 528  EDGKAGFYCCSQKHMLQNYQNFMKSGLPQRVLFYQDDEWKDFPGSINSLVREDFKRKKAV 707
            E  KA   C  +  ++Q+YQNFM S LP+R+L  Q  EWKDFP  I  L   DF+ KK +
Sbjct: 55   EGHKAKIKCHFKMQIIQSYQNFMTSALPKRILLRQGGEWKDFPKQIVKLAHSDFRTKKTI 114

Query: 708  TEVIHESQRLLLNFFSMVLINLGTGFQKPVAWIDEHGKCFFPELYSEFCAPNGCFHSDKG 887
            TE  H++   LL+F  M  I+  TG Q+P+AWIDE+GK +FPE + E            G
Sbjct: 115  TEGEHQTHLFLLDFVHMTFIDSKTGLQRPIAWIDENGKQYFPEFFIEDKTLYRKKELGNG 174

Query: 888  HDVHMSCRRNGTREPETK-NVFVSAAESSNSEVPDYAIISNGNHTKEISAGFQERAEIYE 1064
            ++V++    NGT+E         S+AESSN E     + S      E S    +   + E
Sbjct: 175  NNVYIIVEPNGTQEMNDHFGTSESSAESSNFESSTDDVSSPKRAKAERSVAGNKTGGVKE 234

Query: 1065 TTGENES---CPLLATGPIQEKSAKPATVPDVYSAVQNILLLGLGQYIAPKDIVGIFR 1229
            T GENE     P+      Q+K    + V    SAVQ +LL GLG  +  KDIVGI+R
Sbjct: 235  TIGENEPHALLPIPCRSLPQDKLGDHSRVQLAISAVQKLLLQGLGTVLGSKDIVGIYR 292


>gb|ABB48030.1| Poly polymerase catalytic domain containing protein, expressed [Oryza
            sativa Japonica Group] gi|110289646|gb|ABG66291.1| Poly
            polymerase catalytic domain containing protein, expressed
            [Oryza sativa Japonica Group]
          Length = 497

 Score =  151 bits (382), Expect = 3e-34
 Identities = 107/298 (35%), Positives = 143/298 (47%), Gaps = 6/298 (2%)
 Frame = +3

Query: 354  MEPKNVKVLGNGKKAITDINHA--TIFADCFTDGNGGPALGHHQRILDQSSENCYGNAAT 527
            M   N KVL    + I+ +        A C   GN       H+   D S    Y     
Sbjct: 1    MAAMNEKVLDKCGRNISSLKRKRDNPAARCADAGNTSKL---HKHPADNSVVRFY---VD 54

Query: 528  EDGKAGFYCCSQKHMLQNYQNFMKSGLPQRVLFYQDDEWKDFPGSINSLVREDFKRKKAV 707
            E  KA   C  +  ++Q+YQNFM S LP+R+L  Q  EWKDFP  I  L   DF+ KK +
Sbjct: 55   EGHKAKIKCHFKMQIIQSYQNFMTSALPKRILLRQGGEWKDFPKQIVKLAHSDFRTKKTI 114

Query: 708  TEVIHESQRLLLNFFSMVLINLGTGFQKPVAWIDEHGKCFFPELYSEFCAPNGCFHSDKG 887
            TE  H++   LL+F  M  I+  TG Q+P+AWIDE+GK +FPE + E            G
Sbjct: 115  TEGEHQTHLFLLDFVHMTFIDSKTGLQRPIAWIDENGKQYFPEFFIEDKTLYRKKELGNG 174

Query: 888  HDVHMSCRRNGTREPETK-NVFVSAAESSNSEVPDYAIISNGNHTKEISAGFQERAEIYE 1064
            ++V++    NGT+E         S+AESSN E     + S      E S    +   + E
Sbjct: 175  NNVYIIVEPNGTQEMNDHFGTSESSAESSNFESSTDDVSSPKRAKAERSVAGNKTGGVKE 234

Query: 1065 TTGENES---CPLLATGPIQEKSAKPATVPDVYSAVQNILLLGLGQYIAPKDIVGIFR 1229
            T GENE     P+      Q+K    + V    SAVQ +LL GLG  +  KDIVGI+R
Sbjct: 235  TIGENEPHALLPIPCRSLPQDKLGDHSRVQLAISAVQKLLLQGLGTVLGSKDIVGIYR 292


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