BLASTX nr result

ID: Dioscorea21_contig00005264 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00005264
         (377 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003548086.1| PREDICTED: thylakoid membrane phosphoprotein...   122   3e-26
ref|XP_002320236.1| predicted protein [Populus trichocarpa] gi|2...   120   9e-26
gb|ABK95200.1| unknown [Populus trichocarpa]                          120   9e-26
ref|NP_566086.1| thylakoid membrane phosphoprotein [Arabidopsis ...   119   2e-25
ref|XP_002266107.1| PREDICTED: thylakoid membrane phosphoprotein...   119   3e-25

>ref|XP_003548086.1| PREDICTED: thylakoid membrane phosphoprotein 14 kDa,
           chloroplastic-like [Glycine max]
          Length = 168

 Score =  122 bits (306), Expect = 3e-26
 Identities = 54/89 (60%), Positives = 69/89 (77%)
 Frame = +1

Query: 82  ILNTIQETWNKLDDKYXXXXXXXXXXXXXWCSTGLISAVDRLPLLPGIFELVGIGYTGWF 261
           I+ T+QETW+K+DDKY             W S GLISA+DRLPL+PGI E+VGIGYTGWF
Sbjct: 80  IVKTLQETWDKVDDKYAVSSLALVGVVALWGSVGLISAIDRLPLIPGILEIVGIGYTGWF 139

Query: 262 VYRNLIFKPDREALITKVKCTYSDIIGKS 348
           VY+N++FKPDREAL+ KVK TY++I+G +
Sbjct: 140 VYKNIVFKPDREALVRKVKETYNEILGSN 168


>ref|XP_002320236.1| predicted protein [Populus trichocarpa] gi|222861009|gb|EEE98551.1|
           predicted protein [Populus trichocarpa]
          Length = 172

 Score =  120 bits (302), Expect = 9e-26
 Identities = 53/89 (59%), Positives = 67/89 (75%)
 Frame = +1

Query: 82  ILNTIQETWNKLDDKYXXXXXXXXXXXXXWCSTGLISAVDRLPLLPGIFELVGIGYTGWF 261
           I+ T+QE W+K++DKY             W STGLISA+DRLPL+PG+ ELVGIGY+GWF
Sbjct: 84  IVKTVQEAWDKVEDKYAVSSLVVAGGVALWGSTGLISAIDRLPLIPGVLELVGIGYSGWF 143

Query: 262 VYRNLIFKPDREALITKVKCTYSDIIGKS 348
            Y+NL+FKPDREALI K+K TY ++IG S
Sbjct: 144 AYKNLVFKPDREALIAKIKDTYREVIGSS 172


>gb|ABK95200.1| unknown [Populus trichocarpa]
          Length = 172

 Score =  120 bits (302), Expect = 9e-26
 Identities = 53/89 (59%), Positives = 67/89 (75%)
 Frame = +1

Query: 82  ILNTIQETWNKLDDKYXXXXXXXXXXXXXWCSTGLISAVDRLPLLPGIFELVGIGYTGWF 261
           I+ T+QE W+K++DKY             W STGLISA+DRLPL+PG+ ELVGIGY+GWF
Sbjct: 84  IVKTVQEAWDKVEDKYAVSSLVVAGGVALWGSTGLISAIDRLPLIPGVLELVGIGYSGWF 143

Query: 262 VYRNLIFKPDREALITKVKCTYSDIIGKS 348
            Y+NL+FKPDREALI K+K TY ++IG S
Sbjct: 144 AYKNLVFKPDREALIAKIKDTYREVIGSS 172


>ref|NP_566086.1| thylakoid membrane phosphoprotein [Arabidopsis thaliana]
           gi|79324933|ref|NP_001031551.1| thylakoid membrane
           phosphoprotein [Arabidopsis thaliana]
           gi|38503349|sp|Q8LCA1.2|TMP14_ARATH RecName:
           Full=Thylakoid membrane phosphoprotein 14 kDa,
           chloroplastic; Flags: Precursor
           gi|3510256|gb|AAC33500.1| expressed protein [Arabidopsis
           thaliana] gi|17473794|gb|AAL38332.1| unknown protein
           [Arabidopsis thaliana] gi|21386997|gb|AAM47902.1|
           unknown protein [Arabidopsis thaliana]
           gi|330255664|gb|AEC10758.1| thylakoid membrane
           phosphoprotein [Arabidopsis thaliana]
           gi|330255665|gb|AEC10759.1| thylakoid membrane
           phosphoprotein [Arabidopsis thaliana]
          Length = 174

 Score =  119 bits (299), Expect = 2e-25
 Identities = 54/89 (60%), Positives = 63/89 (70%)
 Frame = +1

Query: 82  ILNTIQETWNKLDDKYXXXXXXXXXXXXXWCSTGLISAVDRLPLLPGIFELVGIGYTGWF 261
           I+ T QE W K+DDKY             W S G+ISA+DRLPL+PG+ ELVGIGYTGWF
Sbjct: 86  IVKTAQEAWEKVDDKYAIGSLAFAGVVALWGSAGMISAIDRLPLVPGVLELVGIGYTGWF 145

Query: 262 VYRNLIFKPDREALITKVKCTYSDIIGKS 348
            Y+NL+FKPDREAL  KVK TY DI+G S
Sbjct: 146 TYKNLVFKPDREALFEKVKSTYKDILGSS 174


>ref|XP_002266107.1| PREDICTED: thylakoid membrane phosphoprotein 14 kDa, chloroplastic
           [Vitis vinifera] gi|296089017|emb|CBI38720.3| unnamed
           protein product [Vitis vinifera]
          Length = 171

 Score =  119 bits (298), Expect = 3e-25
 Identities = 51/89 (57%), Positives = 67/89 (75%)
 Frame = +1

Query: 82  ILNTIQETWNKLDDKYXXXXXXXXXXXXXWCSTGLISAVDRLPLLPGIFELVGIGYTGWF 261
           I+ T+QE W+K++DKY             W STG++SA+D+LPL+PG+ E+VGIGY+GWF
Sbjct: 83  IIKTVQEAWDKVEDKYAVSSLAAAGFVGLWVSTGMVSAIDKLPLVPGVLEIVGIGYSGWF 142

Query: 262 VYRNLIFKPDREALITKVKCTYSDIIGKS 348
            Y+NLIFKPDREALI K+K TY +IIG S
Sbjct: 143 AYKNLIFKPDREALIQKIKDTYKEIIGSS 171


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